Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Tcf20
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name transcription factor 20
Also known as 2810438H08Rik|SPBP|mKIAA0292
Coordinate chr15:82692648-82872304
Strand -
Gene summary Enables DNA-binding transcription factor activity; transcription cis-regulatory region binding activity; and transcription coactivator activity. Acts upstream of or within positive regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in several structures, including branchial arch; central nervous system; early conceptus; genitourinary system; and sensory organ. Used to study Phelan-McDermid syndrome and autism spectrum disorder. Orthologous to human TCF20 (transcription factor 20). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tcf20

Retroname Coord Strand Genomic Region ENSG
Tcf20P1 chr14:79446910-79450629 - Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_013836.3
GGAGAAACTgccccctttcctttttcttcccggTTTCTcgctttcccttcctccctgcctccgcGGGGGGTTGTTTTCCTGCCGGCCTGCATGCTGTGGGCTGTCAAGGGGTTTGGGGGCAAGTGCCAGGGGAGGATGCAGCTGCAAAGgAGGGCTGCTGGCCTGCTGCTGTGCTGCTGAACAGTATGCAGTCGTTTCGGGAGCAAAGCAGTTACCACGGAAACCAGCAGAGCTACCCACAGGAGGTGCACAGCTCATCCCGCATAGAAGAGTTCAGCCCTCGCCAGGCCCAGATGTTCCAGAATTTTGGGGGAGcaggtggtggtagtagtggcaCTGGCAGCAGCAGTAGCGGTCGACGAGGAACAGCTGCTGCAGCGGCAGCAATGGCTAGTGAGACCTCTGGCCATCAAGGCTATCAGGGTTTCAGGAAAGAAGCTGGAGATTTTTACTACATGGCAGGCAACAAAGACACAGTGGCAGCAGGAACCCCACAGCCTCCTCAGCGAAGGCCTTCTGGGCCTGTACAGAGCTATGGACCTCCCCAGGGGAGCAGCTTTGGCAATCAGTATGCGAGTGAGGGTCATGTGAGCCAATTTCAAGCACAGCACTCTGCCCTTGGTGGTGTGTCTCATTATCAGCAGGATTACACAGGGCCTTTCTCTCCTGGGAGTGCTCAGTATCAACAGCAGGCCTCTAgccaacaacagcagcagcagcagcagcagcaacagcagcagcagcagcaacagcagcagcaagtaCAGCAGTTGAGACAACAGCTTTACCAATCCCATCAGCCTCTGCCACAAACCACTGGACAGCCAGCCTCTGGCTCATCGCATCTACAACCAATGCAGCGGCCCTCAACTCTGCCATCTTCTGCTGGTTATCAGTTAAGAGTAGGTCAGTTTGGACAGCACTACCAgtcttctgcttcctcctcttcctcctcctccttcccttctccacaGCGTTTCAGTCAGTCTGGACAAAGCTATGATGGCAGTTACAGTGTGAATGCTGGATCTCAGTATGAAGGGCATAATGTGGGTTCTAATGCACAGGCTTATGGAACACAATCAAATTATAGCTATCAACCTCAGTCTATGAAAAATTTTGAACAGGCAAAGATTCCACCAGGAAAccagcaggggcagcagcagcaacagcagcaaccacAACCTCAGCAACAGCAGccgcagcaacagcagcaacagcagcagcagcagcaacatcctccccagcatgtgATGCAGTACACAAATGCTGCCACCAAGATGCCTCTGCAAAGCCAGGTTGGGCAGTACAACCAGCCTGAGGTTCCTGTAAGGTCTCCCATGCAGTTCCACCAGAATTTCAGCCCTATTTCTAACCCTTCTCCAGCTGCTTCTGTGGTTCAGTCTCCAAGCTGTAGCTCTACACCTTCTCCTCTCATGCAGAGTGGTGAGAATCTCCAGTGTGGGCAAGGCAATGTGCCCATGAGTTCCAGAAACCGAATTTTACAGCTAATGCCCCAGCTCAGTCCAACTCCATCAATGATGCCCAGTCCTAACTCTCATGCTGCAGGATTCAAAGGATTTGGATTAGAAGGGGTGCCGGAAAAGCGGCTGACTGATCCTGGGTTGAGTAGTTTGAGTGCTTTGAGTAGTCAAGTGGCCAATCTTCCTAATACTGTCCAGCACATGTTACTTTCTGATGCTTTGACACCTCAGAAGAAGACGTCTAAGAGGCCCTCATCATCATCTAAGAAAGCAGATAGCTGTACAAACTCAGAAGGCTCCTCACAGCCTGAAGAACAACTAAAGTCCCCTATGGCTGAGTCATTGGATGGAGGTTGCTCTAGTAGTTCAGAAGATCAAGGTGAGAGGGTGAGGCAACTGAGTGGCCAGAGCACTAGCTCTGACACCACCTATAAGTGTGGCGCTTCAGAGAAAGCTGGCTCCTCACCAACACAAGGTGCTCAGAATGAGGCCCCTAGGCTCAGTACCAGTCCTGCAACTAGGGACGAAGCTGCCTCTCCAGGTGCTAAggacacatcactgtcatctgaGGGGAACACAAAAGTCAATGAGAAGACAGTTGGGGTGATTGTCTCCCGAGAAGCCATGACAGGTCGGGTAGAAAAATCTGGTGGACAAGATAAAGGCTCCCAGGAGGATGATCCTGCTGCCAGTCAGAGACCACCTAGCAATAGTGGCGTAAAGGAAATCAGCCACACATCACTTCCACAGCCAGATCCTCCAGGAGGAGGGAGCAAAGGAAACAAGAATGGTGATAATAATAGCTCTAACCACAATGGAGAGGGGAATGGCCCGAGTAGCCACTCCGCAGTAGGCCCAAGTTTCACAGGCAGGACTGAGCCTAGCAAGTCTCCTGGAAGTTTGCGCTATAGTTACAAAGAGAGTTTTGGGTCAGCTGTACCACGAAATGTCAGTGGTTATCCTCAGTATCCTTCAGGACAAGAAAAGGGGGATTTTGGCAGCCATGGAGAGCGAAAGGGTAGAAATGAGAAGTTCCCAAGTCTTCTACAGGAAGTGCTTCAGGGCTACCACCACCATCCTGACAGAAGGTATCCTAGAAGCGCACAGGAACATCAAGGGATGGCTAGTGGCCTGGAAGGAACTGCAAGGCCTAACATCTTAGTCAGTCAAACCAATGAATTAGCTAGCAGGGGCCTTCTGAACAAGAGTATTGGATCCCTGTTGGAAAATCCCCACTGGGGACCATGGGAAAGGAAGTCAAGCAGCACAGCTCCTGAAATGAAACAGATCAATTTGTCTGACTATCCCATTCCCAGGAAGTTTGAGATAGAACCTCCATCATCAGCCCATGAGCCTGGAGGCTCCCTTTCTGAAAGGAGGTCAGTAATCTGTGATATATCCCCACTAAGACAGATTGTCAGGGACCCAGGGGCTCACTCATTGGGACACATGGGTACTGATGCCAGAATTGGGAGGAATGAACGTCTCAACCCAAGTTTAAGTCAGTCAGTCATTCTTCCTGGTGGGTTGGTGTCCATGGAAACAAAATTGAAATCCCAGAGTGGACAGATAAAAGAGGAAGACTTTGAACAATCCAAATCTCAAGCTAGTTTCAACAAGAAATCTGGAGACCACTGCCATCCTACCAGCATCAAACATGAGACTTACCGTGGCAATGCAAGTCCTGGAGCAGCAGCCCATGATTCCATTTCAGACTATGGCCCACAAGATAGCAGGTCCACACCAATGCGGCGGGTCCCTGGTAGAGTTGGTAGCCGGGAGACTATGAGGGGTCGGTCCTCTTCTCAGTACCATGACTTTGCAGAAAAATTGAAGATGTCTCCAGGCAGGAGCAGAGGCCCAGGGGGAGACCCTCATCACATGAACCCACATATGACCTTTTCAGAGAGGGCCAATAGGAGTTCTTTACATGCTCCTTTTTCTCCCAACTCAGAAAGCCTGGCCTCTGCTTACCACACAAACACCAGGGCTCATGCTTATGGGGACCCTAATACCGGTTTGAATTCCCAGCTCCATTATAAGAGACAGATGTACCAACAGCAACAAGAGGAGTATAAAGACTGGGCCAGCAGTTCTGCTCAGGGAGTGATCGCTGCTGCGCAGCATAGGCAGGAAGGCCCACGCAAGAGCCCAAGGCAGCAGCAGTTTCTTGACAGAGTACGGAGCCCCCTGAAAAATGACAAAGACGGAATGATGTATGGCCCACCAGTAGGTACGTATCATGAcccaagcactcaggaagctgggcGCTGTCTCATGTCTAGTGATGGTCTGCCTGCCAAAAGCATGGAATTGAAGCACAGCTCTCAGAAGTTACAAGAGTCTTGTTGGGATCTTTCTCGGCAGACTTCTCCAGCCAAAAGCAGTGGTCCTCCAGGAATGTCTAATCAAAAACGGTATGGGCCACCCCATGAGCCAGATGGACATGGACTAGCCGAGTCTGCACAGTCATCCAAACCTAGTAACGTCATGTTACGGCTTCCTGGTCAAGAGGATCATTCTTCTCAAAATCCTTTAATCATGCGAAGGCGGGTTCGTTCTTTTATCTCCCCTATTCCCAGTAAGAGACAGTCACAAGATGTAAAAAACAGTAACGCTGATGATAAAGGGCGCCTCCTCCACCCATCAAAAGAAGGTGCCGATAAAGCATACAATTCCTACAGCCATCTTTCTCACAGTCAGGATATCAAGTCTATTCCTAAGAGAGATTCCTCCAAGGACcttccaaacccagacaatagAAACTGTCCTGCTGTTACCCTGACAAGTCCTGCTAAGACCAAAATACTGCCCCCACGGAAGGGACGGGGATTAAAATTGGAAGCTATAGTTCAGAAGATCACATCTCCAAATATTAGGAGGAGTGCATCTGCAAACAGTGCTGAGGCTGGGGGAGACACAGTCACACTGGATGATATACTATCTCTAAAGAGTGGTCCTCCTGAAGGTGGCACTGTGgctactcaagaggctgagatgGAAAAGCGAAAGTGTGAGGTGGTATCTGACCTAGTCAGTGTAACTAACCAGGAATCGAATGTTGAGAAGCCTCTTCCAGGGCCTTCTGAAGAGTGGCGTGGCAGTGGGGATGACAAAGTCAAGACAGAGGCACATGTAGAAACAGCTTCTACTGGAAAGGAACCCTCTGGTACTATGACATCCACAGCTTCACAGAAGCCTGGTGGTAACCAAGGGAGACCAGATGgttccctgggtggggcagcacCACTAATCTTTCCTGACTCAAAGAATGTAGCTCCAGTGGGCATATTGGCCCCTGAGGCAAATCCCAAggctgaagagaaagagaacGATACAGTCATGATTTCACCCAAACAAGAAAGTTTCCCCCCTAAAGGGTATTTCCCATcaggaaagaaaaaggggagaCCAATCGGTAGTGTCAATAAGCaaaagaaacagcagcagcaaccacctccacctcctcagcCCCCTCAGATGCCAGAAGGTTCTGCAGATGGGGAGCCAAAGCCAAAAAAGCAGAggcaaaggagggagagaaggaagcctGGGGCCCAGCCAAGGAAGCGGAAAACCAAACAAGCAGTTCCCATTGTAGAACCTCAAGAACCAGAGATCAAGCTAAAGTACGCTACCCAGCCACTAGATAAAACTGATGCCAAGAACAAGTCTTTTTTCCCTTACATCCATGTAGTAAATAAGTGTGAACTTGGAGCTGTTTGTACAATCATCAATGCTGAAGAAGAAGAACAGACCAAATTGGTGAGGAGCCGGAAGGGTCAGAGATCTCTGACCCCTCCCCCCAGCAGCACAGAAAGCAAGGTGCTCCCAGCTTCATCCTTTATGCTGCAGGGGCCTGTGGTAACAGAGTCTTCTGTTATGGGGCACCTGGTTTGCTGTCTCTGTGGCAAGTGGGCCAGTTACCGTAACATGGGTGACCTCTTTGGACCCTTTTATCCCCAAGATTATGCAGCCACTCTTCCGAAGAATCCACCTCCTAAGAGGTCCTCAGAAATGCAGAGCAAAGTCAAGGTTCGGCACAAAAGCGCTTCTAATGGTTCTAAAACTgacactgaggaggaggaggagcagcagcagcagaaggagcAGAGGAGCCTGGCTGCTCATCCTAGGTTCAAGCGGCGCCACCGCTCAGAAGACTGTGGTGGAGGTCCTCGGTCCCTGTCCAGGGGGCTCCCTTGTAAAAAAGCAGCCACGGAGGGCAGCAGTGAAAAGACTGTTTCAGACACAAAGCCCTCTGTACCTACCACTTCAGAAGGTGGgcctgagctggagttacaaatccCTGAACTACCTCTTGACAGCAACGAATTTTGGGTCCATGAGGGTTGTATTCTCTGGGCCAATGGAATCTACCTGGTCTGTGGCAGGCTCTATGGCCTGCAGGAAGCGCTGGAAATCGCCAGAGAGATGAAATGCTCCCACTGCCAGGAGGCTGGCGCTACTTTGGGCTGCTACAACAAAGGCTGCTCCTTCCGATACCATTACCCATGTGCCATTGACGCAGATTGTTTGCTGCATGAGGAGAATTTCTCGGTGAGGTGCCCCAAGCACAAGGTGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCACACCCcactctgccctgccctgccctgcacccCCCGCTGCGCTGCGCCTGCCCATGCCAGCACTTCCTTCCTATGTTCTCACATCACACTCAAACTGGTGAcaccacaggaaaagaaagatacaAGATGTTGGAATGGCTGTTTCCATGGACACAATCTCCATAGTGacaatgtgggggaggggggaggggagggctgatGGGGAAACGGGGAGTTAAAAGGGAgggataaaaaatatatatatataaatctatttTTAGTCTGGAAAGACTTTGTTTAAATGAAAGGTGCGCTATCCCTTttgattctattttaaaattatctagtTAATTCAAAATTTGTTCCAATGACAATGAAATTTAAATGTGAAATTGAACTGAACAAACTCATCTCATAAAGGATGGGGTGTGGCTTTGATCTTTAGCCTGTCTCACAATTCAGTGAACACTAGACCCTGGACTGAAAGAGTAGACAAATGACAACCACCCTTCCCTTGGTTAGAATCTGTCTCACAGGGGAAGTTTGAGGGAGGGGGACAGAATGGGGATGGTCATTTTCAAAAGTGTGGGGAATGATGTTTAAAcacaaataaatttttttctttccagaaacactatttatttatttttattttttccctcctttttttttttttttgcggggggtggggtggtagtGGTGAAATTGGCAGATGCCCCAACATCATGGCTGTATCCTGGATCACTGTGGCCCCACCAAGTATGTAGAGTAGCCCCACAGCAGTAGGTGTACCCAAGGAATGGCTTATCTCTGGCGCCCTCTTTCCTTGGCACATTCCATGTAGTTGGTACCCTTGTGGGGACCCACAGCATCCATGGAAACCATGGAGGCCCAGGCCTCTGCTGCTGAAACAAGCAGAGTCTAGGAGAGAACTGTGGCGTGAGCCATGTGGGTGCACTAAGCTGACCAGAGCCAGCCACTTTAACACTtctctattgcttttattttttagagtggAAAGGGGACTTGTCAGATATGTTGCCCATGCTATGTGATTCTTTATGttgtattgttttgatttgtaaattgtataatttttaaatatgagttttaaaaaaa