Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Vps72
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name vacuolar protein sorting 72
Also known as Tcfl1|YL-1
Coordinate chr3:95018353-95030362
Strand +
Gene summary Predicted to enable histone binding activity. Acts upstream of or within somatic stem cell population maintenance. Predicted to be located in nuclear speck. Predicted to be part of protein-containing complex. Predicted to be active in nucleus. Is expressed in several structures, including branchial arch; central nervous system; genitourinary system; limb; and sensory organ. Orthologous to human VPS72 (vacuolar protein sorting 72 homolog). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Vps72

Retroname Coord Strand Genomic Region ENSG
Vps72P1 chr17:38171647-38172742 + Intergenic
 ENSMUSG00000092458 UCSC

Expression

Transcript Sequences

>NM_009336.2
GAGAACCCCGAGCTGGGCCAGGGGCTGAAGGCGGCAGCGCAGTCGCTGTAGGCGGTATGAGTTTGGCTGGGGGCCGGGCCCCACGGAAAACCGCTGGGAACCGGCTTTCTGGGCTcctggaagcagaggaggaagatgagttcTACCAGACAACTTACGGGGGTTTCACCGAGGAATCTGGAGATGATGAGTATCAAGGAGACCAGTCTGATACGGAGGATGAGGTAGACTCTGACTTTGACATTGATGAAGGGGATGAACCATCCAGTGATGGAGAAGCGGAAGAGCCAAGGAGGAAGCGCAGAGTCGTCACCAAAGCCTATAAGGAGCCTCTAAAGAGCTTGAGGCCTCGCAAGGTCAGCACCCCAGCAAGCAGCTCCCAGAAGGCCAGAGAGGAGAAGACGCTGCTGCCACTGGAGCTCCAGGACGATGGCTCTGACAGCCGCAAGTCTATGCGTCAGTCTACAGCTGAGCACACACGACAAACGTTCCTTCGGGTTCAAGAGAGGCAAGGACAGTCCCGGAGGCGGAAGGGTCCCCACTGTGAGCGACCACTAACCCAGGAAGAGCTGCTCAGGGAGGCCAAGATCACTGAAGAGCTCAACTTACGTTCACTCGAGACCTATGAAAGGCTGGAGGCTGACAAAAAGAAGCAGGTTCACAAGAAGCGGAAGTGCCCTGGGCCAATAATCACCTACCACTCAGTGACGGTGCCGCTTGTTGGGGAGCCCGGCCCCAAGGAGGAAAATGTGGACGTGGAAGGCCTTGATCCTGCTCCTACAGCCTCTGCACTGGCTCCACATGCTGGGACCGGGACTGGAGCTGCCGCTGCCACCCCTCCTGCTCACTGCTCTCGCACCTTCATCACGTTCAGTGATGATGCAACGTTTGAAGAGTGGTTCCCCCAGGGGCGACCCCCGAAGGTCCCGGTGCGGGAGGTCTGCCCAGTGACCCACCGTCCAGCTTTGTACCGGGACCCTGTTACAGACATACCCTATGCCACTGCTAGAGCCTTCAAGATCATCCGTGAGGCGTACAAGAAGTACATCACTGCCCACGGACTTCCACCCACCGCCTCGGCGCTGGGCCCCGGGCCCCCACCCCCCGAGCCACTACCTGGCTCTGGGCCTCGAGCCTTGCGTCAGAAGATTGTCATCAAATAGAGACACCTGACCCCTAGACAGTCCCTCTCCTGACCTGGCTCTCCACTCCGCCCTCCCTTCTGCCAACCTTCGCCCTTGTTTCCCTCAGTTCCTCCCTAGTTCATTTCATTTACTTGtgctcttcatttttttaatctaataaaATGGTAAAATCCTTTTTGTCTGATGTGTAAggttggggcagaggcagggggatttctgagttcgaggccaacctggtctacagagtgagttccaggacagccagggctaaacagacaaatcctgtcttgg