Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Socs2
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name suppressor of cytokine signaling 2
Also known as 8030460M17|CIS2|Cish2|D130043N08Rik|JAB|SOCS-2|SSI-2|hg
Coordinate chr10:95219765-95253176
Strand -
Gene summary Enables growth hormone receptor binding activity. Acts upstream of or within several processes, including mammary gland development; negative regulation of receptor signaling pathway via JAK-STAT; and positive regulation of neuron differentiation. Predicted to be located in cytoplasm. Predicted to be part of phosphatidylinositol 3-kinase complex. Is expressed in several structures, including lung; primary sex cord; retina; and ureteric tip. Human ortholog(s) of this gene implicated in endometrial cancer and ovarian carcinoma. Orthologous to human SOCS2 (suppressor of cytokine signaling 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Socs2

Retroname Coord Strand Genomic Region ENSG
Socs2P1 chr12:14544470-14545260 + Intergenic
ENSMUSG00000050974 UCSC
Socs2P2 chr15:74857223-74860726 - Intergenic
ENSMUSG00000101132 UCSC

Expression

Transcript Sequences

>NM_001168656.1
GTGTAATTCCAGCACACAGTTCTTCGGCGGGAAAACACCTTGTTTACTCTCATCCTGTCTCCCTCCTCACCCCTCTACTCCGGCCAACTTTAGTGTCTTGGATCTCTGCCCTTTTTACCCGTCTTTCCCCAGAGTTGGGCAGGGCGTTAGCTGGATGCTCGGGGTTAAATGGCGATCTGTGGGTGACAGTGTCTGCGAGAGACTTTGCCACACCATTCTGCCGGAATTTGGAGAAAAAGAACCAGCCGCTtccagtcccctccccctccgccACCATTTCGGACACCCTGCACACTCTCGTTTTGGGGTACCCTGTGACTTCCAGGCAGCACGCGAGGTCCACTGGCCCCAGCTCGGGCGACCAGCTGTCTGGGACGTGTTGACTCATCTCCCATGACCCTGCGGTGCCTGGAGCCCTCCGGGAATGGAGCGGACAGGACGCGGAGCCAGTGGGGGACCGCGGGGTTGCCGGAGGAACAGTCCCCCGAGGCGGCGCGTCTGGCGAAAGCCCTGCGCGAGCTCAGTCAAACAGGATGGTACTGGGGAAGTATGACTGTTAATGAAGccaaagagaaattaaaagagGCTCCAGAAGGAACTTTCTTGATTAGAGATAGTTCGCATTCAGACTACCTACTAACTATATCCGTTAAGACGTCAGCTGGACCGACTAACCTGCGGATTGAGTACCAAGATGGGAAATTCAGATTGGATTCTATCATATGTGTCAAGTCCAAGCTTAAACAGTTTGACAGTGTGGTTCATCTGATTGACTACTATGTCCAGATGTGCAAGGATAAACGGACAGGCCCAGAAGCCCCACGGAATGGGACTGTTCACCTGTACCTGACCAAACCTCTGTATACATCAGCACCCACTCTGCAGCATTTCTGTCGACTCGCCATTAACAAATGTACCGGTACGATCTGGGGACTGCCTTTACCAACAAGACTAAAAGATTACTTGGAAGAATATAAATTCCAGGTATaagtatttctctctctttttcgtttttttttaaaaaaaaaaaaaacacatgcctCATATAGACTATCTCCGAATGCAGCTATGTGAAAGAGAACCCAGAGGCCCTCCTCTGGATAACTGCGCAGAATTCTCTCTTAAGGACAGTTGGGCTCAGTCTAACTTAAAGGTGTGAAGATGTAGCTAGGTATTTTAAAGTTCCCCTTAGGTAGTTTTAGCTGAATGATGCTTTCTTTCCTATGGCTGCTCAAGATCAAATGGCCcttttaaatgaaacaaaacaaaacaaaacaaaacaaaacaaaaacaaaatgtcccAAGGAAAGGCAAGAGAATATTCCTGTCAGAATgacttgcctttgttttttgggTTCCTATGCACTGGGTCAAAAGTCCAAGCtccataggagagaaagaaaggcttcCATTTCCAGGAGGACAGCTGAAGGAGGGAAAGACCCTGGCTGACCCAGGCTTCAGCTCCACTTCTAGACGCCTGGGGTTCAGTCTGTGTTAGAACCTGTTATAGTTTGCATCCTGATGTATCTAGTAGGAGTTCCGTTAAGCTGACCATGCTTGTATTTATCCCTCGTCTTATGCAACTAATCAAATcaaccaaaaaaaggaaaaaaaaaaaaaaaaaagaaacgaaaaAAGAACCATCACCATGAGATCctgtatttgtctttttttacTACACGTATGACCTCCCCCGTGAGTGAGTACTGTAGTCCTCCATCTCAAGGCAGCCTTACTTCAGACACATTTCAAACTGGTGCAAACAGAAAagacttctctcttttcttctgagGCTAAAGACAAGAATGTCACGCTATACAGGTGCAACTCAATCCTtgaaaacagaaaccaatgcaGACAGAGACATTTTACCCCTTGATGTAGCTGTGAGTCCCAACCTAGtgccattgtttttatttttatttttatttttggaaatggCTTTAGAACTTTCCAAGTTATCCTTGAATTGTCTGACCACGGACATCAACAGCTGCCTCCCTTCTACCATGTAGAATCCTATGACTTAACTTTTCTTCCAGATATAGAGGGGTACCTGCCTGTTTTTCAAAGTGTTTATTTACTGCTGTTACTATTTGATTAGAAtgtatcaaataaaaacaaacctgacTTTTACAAGTTGCACTCAT
>NM_007706.4
GGAGCGAGGGAGGCGCGTCGGGCTGGGAAGTCGCGCGCACACTCGGCTCCGGGGACAGACGGTTAACTCTTGCCAAGTCTCGCCGCCTCTGCGGCTCCCGGGCCTTGGGCTTCCCCCCTGAAGCATGAGCCTTTCCTCCCGCAGCCGCCAACGCTGCGCGGGTCTCGGACAGTGCGCGCCGGGACTCCAGGCGCGCGCCCTCAAGATCCCTTGTGCCCGGAGCCCGGAAGCTTGCGGCAGGCGATCTGTGGGTGACAGTGTCTGCGAGAGACTTTGCCACACCATTCTGCCGGAATTTGGAGAAAAAGAACCAGCCGCTtccagtcccctccccctccgccACCATTTCGGACACCCTGCACACTCTCGTTTTGGGGTACCCTGTGACTTCCAGGCAGCACGCGAGGTCCACTGGCCCCAGCTCGGGCGACCAGCTGTCTGGGACGTGTTGACTCATCTCCCATGACCCTGCGGTGCCTGGAGCCCTCCGGGAATGGAGCGGACAGGACGCGGAGCCAGTGGGGGACCGCGGGGTTGCCGGAGGAACAGTCCCCCGAGGCGGCGCGTCTGGCGAAAGCCCTGCGCGAGCTCAGTCAAACAGGATGGTACTGGGGAAGTATGACTGTTAATGAAGccaaagagaaattaaaagagGCTCCAGAAGGAACTTTCTTGATTAGAGATAGTTCGCATTCAGACTACCTACTAACTATATCCGTTAAGACGTCAGCTGGACCGACTAACCTGCGGATTGAGTACCAAGATGGGAAATTCAGATTGGATTCTATCATATGTGTCAAGTCCAAGCTTAAACAGTTTGACAGTGTGGTTCATCTGATTGACTACTATGTCCAGATGTGCAAGGATAAACGGACAGGCCCAGAAGCCCCACGGAATGGGACTGTTCACCTGTACCTGACCAAACCTCTGTATACATCAGCACCCACTCTGCAGCATTTCTGTCGACTCGCCATTAACAAATGTACCGGTACGATCTGGGGACTGCCTTTACCAACAAGACTAAAAGATTACTTGGAAGAATATAAATTCCAGGTATaagtatttctctctctttttcgtttttttttaaaaaaaaaaaaaacacatgcctCATATAGACTATCTCCGAATGCAGCTATGTGAAAGAGAACCCAGAGGCCCTCCTCTGGATAACTGCGCAGAATTCTCTCTTAAGGACAGTTGGGCTCAGTCTAACTTAAAGGTGTGAAGATGTAGCTAGGTATTTTAAAGTTCCCCTTAGGTAGTTTTAGCTGAATGATGCTTTCTTTCCTATGGCTGCTCAAGATCAAATGGCCcttttaaatgaaacaaaacaaaacaaaacaaaacaaaacaaaaacaaaatgtcccAAGGAAAGGCAAGAGAATATTCCTGTCAGAATgacttgcctttgttttttgggTTCCTATGCACTGGGTCAAAAGTCCAAGCtccataggagagaaagaaaggcttcCATTTCCAGGAGGACAGCTGAAGGAGGGAAAGACCCTGGCTGACCCAGGCTTCAGCTCCACTTCTAGACGCCTGGGGTTCAGTCTGTGTTAGAACCTGTTATAGTTTGCATCCTGATGTATCTAGTAGGAGTTCCGTTAAGCTGACCATGCTTGTATTTATCCCTCGTCTTATGCAACTAATCAAATcaaccaaaaaaaggaaaaaaaaaaaaaaaaaagaaacgaaaaAAGAACCATCACCATGAGATCctgtatttgtctttttttacTACACGTATGACCTCCCCCGTGAGTGAGTACTGTAGTCCTCCATCTCAAGGCAGCCTTACTTCAGACACATTTCAAACTGGTGCAAACAGAAAagacttctctcttttcttctgagGCTAAAGACAAGAATGTCACGCTATACAGGTGCAACTCAATCCTtgaaaacagaaaccaatgcaGACAGAGACATTTTACCCCTTGATGTAGCTGTGAGTCCCAACCTAGtgccattgtttttatttttatttttatttttggaaatggCTTTAGAACTTTCCAAGTTATCCTTGAATTGTCTGACCACGGACATCAACAGCTGCCTCCCTTCTACCATGTAGAATCCTATGACTTAACTTTTCTTCCAGATATAGAGGGGTACCTGCCTGTTTTTCAAAGTGTTTATTTACTGCTGTTACTATTTGATTAGAAtgtatcaaataaaaacaaacctgacTTTTACAAGTTGCACTCAT