Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Tdg
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name thymine DNA glycosylase
Also known as E130317C12Rik|JZA-3|Jza1
Coordinate chr10:82465649-82486633
Strand +
Gene summary Enables several functions, including SUMO binding activity; protein kinase C binding activity; and transcription coregulator activity. Involved in DNA metabolic process; regulation of embryonic development; and regulation of gene expression, epigenetic. Acts upstream of or within negative regulation of chromatin binding activity; negative regulation of protein binding activity; and negative regulation of transcription by RNA polymerase II. Located in PML body. Is expressed in several structures, including epithelium; genitourinary system; nervous system; retina; and skin. Orthologous to human TDG (thymine DNA glycosylase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tdg

Retroname Coord Strand Genomic Region ENSG
TdgP2 chr13:80246586-80247539 - Intergenic
 ENSMUSG00000114287 UCSC
TdgP3 chr15:82400456-82403482 + Intergenic
 ENSMUSG00000047347 UCSC
TdgP4 chr19:33649677-33650927 - Intergenic
 ENSMUSG00000117667 UCSC
TdgP1 chr7:75892936-75895867 - Intragenic
 ENSMUSG00000098009 UCSC

Expression

Transcript Sequences

>NM_001358517.1
CGGAGGGGGACGGAAGTGCGCTGGGGACTCGCCGCGGTGATGTAGCAGCGTGGGAGGGGCCGAGGCCAGCGCCGTCCATCCACCGGCCGCCCCGATCCTGTGGTGAGTCCGCGCGCTGAGCGGCAGAGCGGGCGCCCGTGGGCTCGGCAGGAGTGGCCGTACCCTCGGCGGCGCCGCCATGGACGCAGAGGCCGCGCGCAGCTATTCTCTGGAGCAAGTTCAAGCTTTgtattcatttccatttcaacaaATGATGGCAGAAGTTCCTAACATGGCAGTCACGACTGGACAGCAGGTGCCAGCAGTAGCTCCTAACATGGCAACCGTGACAGAACAGCAGGTGCCCGAAGACGCTCCTGTCCAGGAACCTGCACCAGAAGctccaaagagaaggaaaaggaaacccAGAGCAGCAGAGCCCCAGGAACCAGTGGAGCCCAAAAAACCTGCTACGTCGAAGAAATCCGGCAAGTCTACAAAATCAAAGGAAAAGCAGGAGAAAATCACAGACGCGTTTAAAGTGAAAAGGAAAGTGGACCGCTTCAACGGCGTCTCTGAAGCTGAGCTTCTGACCAAGACTCTTCCTGACATTTTGACCTTCAATCTGGATATTGTGATCATTGGCATTAACCCGGGATTAATGGCTGCTTACAAAGGACATCACTACCCTGGGCCTGGAAATCACTTCTGGAAGTGTCTGTTCATGTCGGGGCTGAGTGAGGTGCAGCTGAATCACATGGATGACCACACCTTACCCGGCAAGTACGGCATCGGATTCACCAACATGGTGGAACGGACGACGCCGGGCAGCAAGGATCTGTCTAGTAAAGAGTTCCGGGAAGGAGGGCGCATCCTGGTGCAGAAACTGCAGAAATATCAGCCACGAATAGCGGTGTTTAATGGAAAATgtaTTTATGAAATTTTCAGTAAAGAAGTTTTTGGAGTAAAGGTTAAGAACTTGGAATTTGGGCTTCAACCCCACAAGATCCCAGACACAGAAACTCTGTGCTACGTCATGCCGTCGTCCAGCGCCAGATGTGCTCAGTTTCCCCGGGCCCAGGACAAAGTTCATTACTACATTAAGCTGAAGGACTTGAGAGACCAACTGAAAGGCATTGAACGCAACGCGGACGTTCAGGAAGTGCAGTATACATTTGACCTGCAGCTTGCGCAAGAGGACGCAAAGAAGATGGCTGTTAAGGAAGAAAAGTATGATCCAGGCTATGAGGCAGCTTACGGCGGTGCCTATGGGGAAAACCCATGTAATGGGGAACCTTGTGGCATTGCTTCAAATGGGCTAACTCACAGTGCGGAGCCGAGAGGAGAAGCGGCCCCCAGCGATGTTCCGAATGGGCAGTGGATGGCACAGTCGTTTGCAGAGCAGATCCCTTCTTTTAATAATTGTGGGACCCgagagcaggaagaagagagccaCGCTTAGGAAGGGTGCCTCTCAGCTCGGGCTCAGGGCTGCAGTTCTAATGCAGACCTCAGGACGGAGAGCCTCAGTGTGCTAACTGAGGGGCTTTAGTGTTAATGGTCCTTTACGCTAGTGGTGTAATTATATATGGAGCAGTTATATGGTAGAGTCAACTGTATGAATCTATGTagtttggaaaggaaaaatagggtgttttgtacttgagttttgtatTTTAACTACCCATCATTCCAGCTTTTTATATACTATATTTCATTTATGAAGAAACCGGTTTTCTCTGAGGAGTCACTTCaatctgtaattttaaaaaagcaacagtCGGAATATTTATAGTTGATTCTTCACTGTGCATACCTATATATGCCCTTATCCCTTTAAATGCCTAAGTAGGGCATGCTACTAAGAATCAAGCTGGTGAAAGGCAGATGTGCCTATCTCTGTTGGAAGCCGACTAACCCTCCGCCCTCCGTGGACTCGAAGCTGGAGGTGGACTCAGAACCCTCTGGGTTGCAGTCACACGCAGACCCCCTTACTCTCCCAGTAGTGTGTGTGGCAGTTGCTTGGTAGTAGAAACCTAGTGGGGCCTGAGCCCTGCCGTTGGCCTCTGCCTCTTGTGGTTCCTGAGAAGGCAGTAGAACCTGGACAGTTGCCACCCCTCTGTTTTACTGAATCCCCCGTCAGTGTTCATCACTGTTGTGATTTTATCCCGACATGGAAAGCGCTAAGAAATGAACTTTCCAGTTAGCCACGCGCTGCTGCAGGTGTTTGATAATCCTGTTTAAACTGGTGCTGTGTACATGGGATGTACTGATACAGAACTTCTCTTCTAGGGAAAGCTAATCATTTGtcaatgatttaaaaattattgtcaCTACTGTTGATTACTGTGGACTAAGTGAGCCTCGTGAAAGAGCTGATTGGAATTTGTACCTTTGTGGCTGCTCATGCATTTTCCATGGTGCTACAGACAGCCTGCCCGGGCTGGTGGCTAGGAAACGTGCGTGTTCAGCGATGCCTAGCGCTCTCACTCCTGAGCACTCTGACTTGGTGCCCACCCCTGGCGCGTGCTGGTTTGGCAGTATGAAATGCCCACGAGGGTTTTGTATCTCACAAAGGTTATGTAGCCTGTTCTGTGAACAATGAGGGAAGCAGTCTCTTGGTGGAAATTTTAACATGCCTTTAGCTGTGGCAGTGAtgggctttctttttccttctgtctggGTCAGGTTGTGCACAAGTCATGTTATTTGGAAGGTGCACTGCACTGCTGTTTACATGGGCATTTTATGCGGGTGCTTTGAAGTGCCTTGCATCAGGGATTAGGATcaattgaattctttttttcatGGGACTATGTAAAGCATGTAGTATTGCCTTGGTATGTAACTATTGTAGTTTTACCATGGAGAAATACCTTTAAATTATAACTCTGGAGAGCAGCCATGAGGACCCTCTGTACTTCCTGGTGCTTTTCCTTAACATGGTGGGTGAGTAGCGAGTGCGGGGCACCCTGTACATGGCAGGGTGGGGCGTTCTCATTAAATAATACTGAGATTTTAAACATGCGCAGTCTGAGCGTTTTTACAATAAACATTAAGAATGGCTATGCTTAGTATACAGGTTTTCCTCCAGCAGGATTTAATGGTATTCCTCCCCACTGGAAACCTGAGGATGGCTTACTTTCTCTTACATGTCACATGACAAAAATCACAAAAGCTTGAATAGTTTATTTTTACAGattctacatttttttaatttataattttgtaaAAGACAAGACTAGCAACctgtttttaagaaagaaaaccctgcagccagatgtggtggcccaggccttcagttccagtacttaggaggcaaagacatgaggatctttgtgagtttgaagttGTGAGTTCCAATTTATCCAGGGATATAGAGAAagaccctgtttgtttgtttgtttgtttttgaggcagcgTTTCTCtccgtagccttggctgtcctgaaactcactgtatagaccaggctggcctcgaactcacagattaaactctttctgcctcctgagtgctgagattaaaggtatgtgccgccACC
>NM_172552.4
CGGAGGGGGACGGAAGTGCGCTGGGGACTCGCCGCGGTGATGTAGCAGCGTGGGAGGGGCCGAGGCCAGCGCCGTCCATCCACCGGCCGCCCCGATCCTGTGGTGAGTCCGCGCGCTGAGCGGCAGAGCGGGCGCCCGTGGGCTCGGCAGGAGTGGCCGTACCCTCGGCGGCGCCGCCATGGACGCAGAGGCCGCGCGCAGCTATTCTCTGGAGCAAGTTCAAGCTTTgtattcatttccatttcaacaaATGATGGCAGAAGTTCCTAACATGGCAGTCACGACTGGACAGCAGGTGCCAGCAGTAGCTCCTAACATGGCAACCGTGACAGAACAGCAGGTGCCCGAAGACGCTCCTGTCCAGGAACCTGCACCAGAAGctccaaagagaaggaaaaggaaacccAGAGCAGCAGAGCCCCAGGAACCAGTGGAGCCCAAAAAACCTGCTACGTCGAAGAAATCCGGCAAGTCTACAAAATCAAAGGAAAAGCAGGAGAAAATCACAGACGCGTTTAAAGTGAAAAGGAAAGTGGACCGCTTCAACGGCGTCTCTGAAGCTGAGCTTCTGACCAAGACTCTTCCTGACATTTTGACCTTCAATCTGGATATTGTGATCATTGGCATTAACCCGGGATTAATGGCTGCTTACAAAGGACATCACTACCCTGGGCCTGGAAATCACTTCTGGAAGTGTCTGTTCATGTCGGGGCTGAGTGAGGTGCAGCTGAATCACATGGATGACCACACCTTACCCGGCAAGTACGGCATCGGATTCACCAACATGGTGGAACGGACGACGCCGGGCAGCAAGGATCTGTCTAGTAAAGAGTTCCGGGAAGGAGGGCGCATCCTGGTGCAGAAACTGCAGAAATATCAGCCACGAATAGCGGTGTTTAATGGAAAATgtaTTTATGAAATTTTCAGTAAAGAAGTTTTTGGAGTAAAGGTTAAGAACTTGGAATTTGGGCTTCAACCCCACAAGATCCCAGACACAGAAACTCTGTGCTACGTCATGCCGTCGTCCAGCGCCAGATGTGCTCAGTTTCCCCGGGCCCAGGACAAAGTTCATTACTACATTAAGCTGAAGGACTTGAGAGACCAACTGAAAGGCATTGAACGCAACGCGGACGTTCAGGAAGTGCAGTATACATTTGACCTGCAGCTTGCGCAAGAGGACGCAAAGAAGATGGCTGTTAAGGAAGAAAAGTATGATCCAGGCTATGAGGCAGCTTACGGCGGTGCCTATGGGGAAAACCCATGTAATGGGGAACCTTGTGGCATTGCTTCAAATGGGCTAACAGCTCACAGTGCGGAGCCGAGAGGAGAAGCGGCCCCCAGCGATGTTCCGAATGGGCAGTGGATGGCACAGTCGTTTGCAGAGCAGATCCCTTCTTTTAATAATTGTGGGACCCgagagcaggaagaagagagccaCGCTTAGGAAGGGTGCCTCTCAGCTCGGGCTCAGGGCTGCAGTTCTAATGCAGACCTCAGGACGGAGAGCCTCAGTGTGCTAACTGAGGGGCTTTAGTGTTAATGGTCCTTTACGCTAGTGGTGTAATTATATATGGAGCAGTTATATGGTAGAGTCAACTGTATGAATCTATGTagtttggaaaggaaaaatagggtgttttgtacttgagttttgtatTTTAACTACCCATCATTCCAGCTTTTTATATACTATATTTCATTTATGAAGAAACCGGTTTTCTCTGAGGAGTCACTTCaatctgtaattttaaaaaagcaacagtCGGAATATTTATAGTTGATTCTTCACTGTGCATACCTATATATGCCCTTATCCCTTTAAATGCCTAAGTAGGGCATGCTACTAAGAATCAAGCTGGTGAAAGGCAGATGTGCCTATCTCTGTTGGAAGCCGACTAACCCTCCGCCCTCCGTGGACTCGAAGCTGGAGGTGGACTCAGAACCCTCTGGGTTGCAGTCACACGCAGACCCCCTTACTCTCCCAGTAGTGTGTGTGGCAGTTGCTTGGTAGTAGAAACCTAGTGGGGCCTGAGCCCTGCCGTTGGCCTCTGCCTCTTGTGGTTCCTGAGAAGGCAGTAGAACCTGGACAGTTGCCACCCCTCTGTTTTACTGAATCCCCCGTCAGTGTTCATCACTGTTGTGATTTTATCCCGACATGGAAAGCGCTAAGAAATGAACTTTCCAGTTAGCCACGCGCTGCTGCAGGTGTTTGATAATCCTGTTTAAACTGGTGCTGTGTACATGGGATGTACTGATACAGAACTTCTCTTCTAGGGAAAGCTAATCATTTGtcaatgatttaaaaattattgtcaCTACTGTTGATTACTGTGGACTAAGTGAGCCTCGTGAAAGAGCTGATTGGAATTTGTACCTTTGTGGCTGCTCATGCATTTTCCATGGTGCTACAGACAGCCTGCCCGGGCTGGTGGCTAGGAAACGTGCGTGTTCAGCGATGCCTAGCGCTCTCACTCCTGAGCACTCTGACTTGGTGCCCACCCCTGGCGCGTGCTGGTTTGGCAGTATGAAATGCCCACGAGGGTTTTGTATCTCACAAAGGTTATGTAGCCTGTTCTGTGAACAATGAGGGAAGCAGTCTCTTGGTGGAAATTTTAACATGCCTTTAGCTGTGGCAGTGAtgggctttctttttccttctgtctggGTCAGGTTGTGCACAAGTCATGTTATTTGGAAGGTGCACTGCACTGCTGTTTACATGGGCATTTTATGCGGGTGCTTTGAAGTGCCTTGCATCAGGGATTAGGATcaattgaattctttttttcatGGGACTATGTAAAGCATGTAGTATTGCCTTGGTATGTAACTATTGTAGTTTTACCATGGAGAAATACCTTTAAATTATAACTCTGGAGAGCAGCCATGAGGACCCTCTGTACTTCCTGGTGCTTTTCCTTAACATGGTGGGTGAGTAGCGAGTGCGGGGCACCCTGTACATGGCAGGGTGGGGCGTTCTCATTAAATAATACTGAGATTTTAAACATGCGCAGTCTGAGCGTTTTTACAATAAACATTAAGAATGGCTATGCTTAGTATACAGGTTTTCCTCCAGCAGGATTTAATGGTATTCCTCCCCACTGGAAACCTGAGGATGGCTTACTTTCTCTTACATGTCACATGACAAAAATCACAAAAGCTTGAATAGTTTATTTTTACAGattctacatttttttaatttataattttgtaaAAGACAAGACTAGCAACctgtttttaagaaagaaaaccctgcagccagatgtggtggcccaggccttcagttccagtacttaggaggcaaagacatgaggatctttgtgagtttgaagttGTGAGTTCCAATTTATCCAGGGATATAGAGAAagaccctgtttgtttgtttgtttgtttttgaggcagcgTTTCTCtccgtagccttggctgtcctgaaactcactgtatagaccaggctggcctcgaactcacagattaaactctttctgcctcctgagtgctgagattaaaggtatgtgccgccACC