| Gene Name | Alyref |
|
| Specie | Mus musculus | |
| Full Name | Aly/REF export factor | |
| Also known as | Aly|Ref1|Ref1-I|Refbp1|Tho4|Thoc4 | |
| Coordinate | chr11:120485342-120489191 | |
| Strand | - | |
| Gene summary | Enables RNA binding activity and single-stranded DNA binding activity. Predicted to be involved in several processes, including mRNA export from nucleus; regulation of nucleobase-containing compound metabolic process; and viral mRNA export from host cell nucleus. Predicted to act upstream of or within RNA splicing; mRNA processing; and mRNA transport. Predicted to be located in cytoplasm. Predicted to be part of catalytic step 2 spliceosome; exon-exon junction complex; and transcription export complex. Predicted to be active in nucleus. Predicted to colocalize with chromosome, telomeric region. Is expressed in several structures, including branchial arch; central nervous system; genitourinary system; hemolymphoid system gland; and sensory organ. Orthologous to human ALYREF (Aly/REF export factor). [provided by Alliance of Genome Resources, Apr 2022] |
| Retroname | Coord | Strand | Genomic Region | ENSG | |
|---|---|---|---|---|---|
| AlyrefP2 | chr1:50097267-50097690 | + |
Intergenic |
ENSMUSG00000101760 | UCSC |
| AlyrefP3 | chr4:76845530-76846266 | + |
Intragenic |
ENSMUSG00000081656 | UCSC |
| AlyrefP1 | chr1:171331284-171332174 | + |
Intergenic |
ENSMUSG00000060244 | UCSC |
| AlyrefP4 | chr10:100133870-100134272 | - |
Intergenic |
ENSMUSG00000112245 | UCSC |
| AlyrefP5 | chr10:103980483-103980844 | + |
Intergenic |
N/A | UCSC |
| >NM_011568.1 |
| GATCCGAGGCCCGAATCCGCGCCCGCCATGGCCGACAAAATGGACATGTCTTTGGACGACATCATTAAGCTGAACCGGAGCCAGCGAGGAGGCCGCGGCGGGGGCCGGGGTCGCGGCAGGGCCGGCTCCCAGGGCGGCCGCGGCGGCGCAGTGCAGGCCGCCGCGCGGGTGAATCGAGGCGGCGGGCCTATGAGGAACCGGCCCGCCATCGCCCGCGGCGCCGCAGGCGGCGGCAGGAACCGGCCGGCGCCGTACAGCAGACCGAAACAACTTCCCGACAAATGGCAGCACGACCTCTTCGACAGCGGCTTCGGGGGTGGAGCCGGCGTGGAGACCGGCGGGAAGCTGCTGGTGTCCAACCTGGACTTCGGagtgtcagatgctgatattcaGGAACTCTTTGCTGAATTTGGGACATTGAAAAAAGCTGCTGTGCACTATGATCGCTCTGGACGAAGTTTAGGGACAGCAGATGTGCACTTTGAACGGAAAGCAGATGCCCTGAAGGCTATGAAACAGTACAATGGTGTCCCTTTGGATGGCCGCCCTATGAACATCCAGCTTGTCACATCACAGATTGATACACAGCGAAGACCTGCACAGAGCATAAACAGAGGCGGCATGACAAGAAACCGTGGCTCTGgaggttttggtggtggtggcaccAGGAGAGGGACACGTGGAGGCAGCCGGGGAAGAGGTAGAGGCAccggcaggaactcaaagcagcagCTTTCTGCAGAGGAGTTGGACGCACAGCTGGATGCTTACAATGCAAGGATGGACACCAGCTAAACAACTGAGCAAATCCACACAAGTAACAGGACCCAGAAGCCTCGCCTGTGATGCCTAGAGGGAGGGTTGGCAACTGAACTGTGCAGACAAtggtggatttgttttgtttctttttatttcttttctttttttttttcttcctgttttaaaaTAGGATCTAAAAACTcatgtaaagtttttttttttttcttttttggtttttgttttgttttttgtttttttttttaattctgaaacAGACCTGTTTTGTACTGAGTTATTTTTGGGATAAATATTACTGGTTGCTGTTGTGGAGAAGGTGGCATTTTCACCTTTgccataataaaatagaaatgtg |