Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Tgif1
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name TGFB-induced factor homeobox 1
Also known as Tgif
Coordinate chr17:71151200-71160527
Strand -
Gene summary Enables chromatin binding activity. Acts upstream of or within several processes, including negative regulation of retinoic acid receptor signaling pathway; nodal signaling pathway; and positive regulation of fibroblast proliferation. Located in nucleus. Is expressed in several structures, including alimentary system; brain; early conceptus; embryo ectoderm; and genitourinary system. Used to study otitis media. Human ortholog(s) of this gene implicated in holoprosencephaly and holoprosencephaly 4. Orthologous to human TGIF1 (TGFB induced factor homeobox 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tgif1

Retroname Coord Strand Genomic Region ENSG
Tgif1P1 chr3:60249986-60250546 - Intergenic
 ENSMUSG00000107270 UCSC

Expression

Transcript Sequences

>NM_001164076.1
TGCAGTTCCAACGGAACACGGTTATAGCAGCTGCCGCCAAACACGCTTCCTCACGGGGTTTCTCCGCGCTTCCTACCTTAGAGAGTTGGGTGGATGTTATTCTGTGAGAGACCCCGAAACATACGGAACTCATGAAGACCCCGGGTACTTGGTCTTGTTGCAGCATCTGGCAGTGACTCTGAGGATGAAGACAGCATGGACAGTCCCCTGGACCTTTCCTCATCAGCAGCCTCTggcaagagaaggaggagaggcaaTCTGCCCAAGGAGTCAGTCCAGATTCTGCGAGACTGGCTGTATGAACACAGATACAACGCCTATCCCTCAGAGCAAGAGAAAGCACTGCTGTCCCAGCAGACACACCTGTCCACACTACAGGTCTGTAACTGGTTCATCAACGCCCGCCGCAGGCTCCTTCCTGACATGCTGAGAAAGGATGGCAAAGATCCAAATCAGTTCACGATTTCCCGCCGTGGGGCCAAGATTTCAGAAGCTAGCTCTATTGAAGCTGCAATGGGTATCAAAAACTTCATGCCAACTCTAGAAGAGAGCCCATTTCATTCCTGCGTAGTTGGACCCAACCCAACCCTAGGGAGACCAGTGTCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGTCAGTGATCTGCCATACCACTGTGACTGCATTGAAGGATgggcctttctctctctgtcagcCGATTGGTGTGGGACAGAGTACAGATGTACCGCAAATAGCACCCAGCAACTTTACAGACACCTCTCTCGTGTACCCAGAGGACACTTGCAAATCTGGACCCAGTCCAAACCCTCAGAGTGGTCTTTTCAACACTCCTCCCCCTACTCCACCAGACCTCAACCAGGATTTTAGTGGATTCCAGCTTCTAGTGGATGTTGCACTCAAACGAGCGGCAGAGATGGAGCTTCAGGCCAAACTCACAGCTTAACCGTTTTTTCAAACAAAACAGTTCTCCAAAATACGGTCCTGATTGCCGGGGGTGATGGCAAGAGatgcattattttatatatttttctattaatatttGCACATGGGATTGCTCAGACGAAGCTTCCTGTTACTAAGATGTCTTAAGTGGAATAGAGTCATTCCAAGAACTACAAACTAAAGCTACTGTAGAAACAAAGGGTTTTCTTTTCGAATGTTTCTTGGTAGTTTCTCATAATGTGAGACGGTTCCCAGTATCATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTAAactttcagttttttgtttgtttgtttttttttagattcaaGCAAGTATGAATCTAGTTGTTGGATACCTTTTTTCATGATGtaataaagtattttctttaaaagttattgCAA