Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ptpdc1
Plot displaying the genomic locations of a parental gene (in chr13) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name protein tyrosine phosphatase domain containing 1
Also known as Naa-1|Ptpcd1
Coordinate chr13:48731345-48779148
Strand -
Gene summary The protein encoded by this gene is a centrosomal mitotic phosphatase. This protein has been implicated in centrosomal duplication and cytokinesis. In addition, knockdown of expression levels in non-cycling cells results in extra long cilia, suggesting that this protein may function in regulating cilia length independent of a function in cell cycle control. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Sep 2014]

Retrocopy(s) from Ptpdc1

Retroname Coord Strand Genomic Region ENSG
Ptpdc1P1 chr6:41230261-41231161 + Intergenic
ENSMUSG00000103042 UCSC

Expression

Transcript Sequences

>NM_001374755.1
AGTGTAGCTTCtcactgagcaagccagagctgGCTGGcggctgcctgcctctgactctagcCTGCCCGGAGCCAGTGCCATGCAGATGCAGGACCCATCCCGGAGGCCCTCGGCCGTGCACTTCCTCAGTGCCTTTCTGCAGGGCCGCCGGCACTCCACTTCTGACCCAGTCCTGAGGCTACAGCAAGCCCGGCGTGGCTCTGGCTCTGCCACCAAACTGCTGTCCTCATCTTCTCTCCAGGTGATGGTGGCTGTGTCTTCTGTCAGCCGGACAGAGGGGACTCCAACTTTCCCGGAGAGAAAAAAAAATTCAGGACGCCCAGCACCAAAATACACGAAAGTGGGAGAACGTTTGCGGCATGTCATCCCTGGGCACATGGCATGTTCCATGGCGTGTGGTGGGAGAGCGTGTAAGTATGAGAACCCAGCCCGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGAGTATACTCATCCTGGGTCACTGACAATATCCTGGCCATGGCTCGTCCGTCCTCCGAGCTGCTGGAGAAGTATCGCATCATCGAGCAGTTCCTCGGtCAAGGCATAAAAACAATAATCAACCTGCAGCGCCCTGGAGAGCATGCCAGCTGTGGGAGCGCTCTGGAACAAGAAAGTGGTTTCACCTACCTTCCTGAGGCATTCATGGAGGCTGGCATTTATTTCTACAACTTTGGGTGGAAGGATTATGGCGTGGCTTCCCTCACTGCCATCTTGGACATGGTAAAGGTGATGACATTTGCCTTACAGGAAGGGAAAGTGGCTGTCCACTGCCACGCGGGGCTCGGCCGCACAGGTGTGCTAATAGCATGTTATTTAGTTTTTGCAACAAGAATGACTGCTGACCAAGCAATTATATTTGTTCGGGCAAAACGCCCCAATTCCATACAAACAAGAGGACAACTGCTCTGTGTACGGGAATTCACGCAGTTCCTGGCTCCACTCCGTAatattttctcttgctgtgaccCCAAAGCACATGCTGTTACCTTAGCCCAGTACCTGATTCGCCAGCGACATCTGCTTCATGGCTACGAGGCACGACTTCTGAAGTACGTGCCGAAGATCATCCACCTGGTTTGCAAACTGCTGCTTGACTTGGCTGAGAACCGGCCAGTGGTGATGAAGAGCATGCTAGAAGGACCTGTGCTCTCTGCTGAAATCGAAAAGACCGTGTCTGAGATGGTCACGCTGCAGCTAGATCAAGAGTTACTCAGGCAAAACAGTGATGTGCCCGACCCGTTTAACCCCACTGCAGAGGTGGCCGAGTTCGAGAATCAGGATGTGATTCTCTCTACTGAGCAGGAGTTTGACCCCCTCTGGAAGAGGAGGGATATTGAGTGCCTTCAGCCCCTGACACATCTGAAAAGACAGCTCAGCTACAGCGACTCAGACTTAAAGAGGGCCAAAGCCATCCTGGAACAAGGGGAGACACCTTGGACAGTGCCTGCCCAGGAGTTGCTAGACCACAGTCTCCAGCATCAGAAGCCCACGAGCCATTGCTACATGCCACCAACTCCAGAGCTGGGTTTTAATAAGGAGGCACTGGTCCAAAATACCTTTTCTTTCTGGACTCCGTCAAAGTGTGGAGGcttagaaggactgaaggatgAGGGATCGCTGCTTTTGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGAGCAGAACCTTCTCTGTGGGTGTTTCTTGTTCACACAATCCTGGAGAGCCAGTGCCGCCCAACTTCACAAGTATCCATAAGGATCCAGAGCAGGTCACCCATTGCCGGTGTGAGGCTCCTGGTGGCTGGGTCCCGGGCCCTGTTCACGAGATGGTCAGGAGCCCCTGTAGCCCTCTGAACTGTGGCTCCAGTCCTAAGGCGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGACCTGTCTGAGGCAGTGCCGCATGCTGGTCTGCAGCCTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTTTGTTGAAAAGGAGGAAGTGAAAAGGAAAGTGGAGATGTGGCAGAAAGAACTAAATTCCCGGGAGGAAGCCTGGGAACGAATATGCGGCGAGAGAGACCCTTTCATCTTGTGCAGTTTGATGTGGTCTTGGGTTGAGCAACTGAAAGAGCCTGTAATCACCAAAGAGGATGTGGACATGCTGGTCGACAGACAAGCAGATGCTGCCGAAGCCCTGTTTTTACTAGAGAAGGGGCAGTACCAGACCATCCTCTGTGTGCTGCACTGCATAGTGAGCCTGCAGACGCTTCCCATGGAGGTGGAGGAAGCTTGCCTTTTACATGCCATTAAAGCTTTCACCAAGGTTAATTTTGATTCTGAAAACGGACCAATAGTTTACGACaccttgaaaaaaatatttaagcacacgttggaagaaaagaggaaaatggcAAAAGACAGCCTCTCCTGAGGCTTTCTTCTCTGGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCctcttttagttatttattttaaaaatatctttgaacTGTGTCTTGAAAAATCGCCATGAAGTTGGtgccactttatttatttactcactgaCTTGATGTTGTTGTGTTGGCATATTTAGTATGTTGTATCTGTGCCCTTACTCTTGTTGACATTTGAGAGGAAAAAATAACCCTTTCAAAACAGTTATTTTTTTGACAAAACTCTTTGTGGAGTTTTTACCAAATAGATCATTTTAGTAGTAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATATGACCTAAGATAGTCACCAAGTGTCTTAAACAGTTTTATATTTGTTACTACTAAGAAggctattaatacattttaaagtactttaaaaaaaaaacttgaagccttttgttcttcttttctttctttacagatGTGGTCAGGTCTTTGAAGGAATATTATTTTCAGTGATTCGGCAGTTCAGCTTACCTTAGCAGACTGGCTGGAGTGGGTCGGATTCTGTACTTATAGAAAGTAGACTTGCTCTTTGTCAGGCTTCCAGACAACCTCTCCCTTGGCTGTCAGGGGAGGGAGCAGCTCTCAACCCAGAGACCTTATCCTGCTTCCCCCACCTGCTGCTGAGCCAGGTCCCTGCTGTACAGAGAAACGGACCACAAGTGGCCAGGATGGGCAGCTGCTAAGGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACCAGGGCACAGCTCCTAGCCAGCCCTGCTCCCTGGGGGCAGTGTGACCATCCTTCACAGGCGCTCAGAGCTAGAGTAAGCCAGGCCAGCCACTTTCTGTCAGGAGTGCTGGCATTGCTGCCCGGCTTGTGCCCAGCCCCAAAGCTGCCCTTTCATAAGCCCATTGCCTCAGCCTGCCTTGGCCTGCTCTGTTGCTAGTGGCTGTTTTGCTGTAAGGATTATAATTTTTAAGTTGAATTTGACCCTAACTGGCTTCAAATAAGGACAGGTGGCTGGTCAAACTTGTTCCTTTAGATTAAACAGGTAATCAGCAATTGAGGCCTTATTTAAATCGAATTAATACATAGGAGTAGCAGAGCCCATGCCATAATAGTTTTCTTGACAAAGGTGGTAACTAGACCAATTCAAACTAAAGAATTAACTCTTTGATTCTCAGAATTTTAGGAAACAAGCAAGACTGAATTAGAACAAATGAAATTTCCCTAACTCATGCATTTCTGAATTACAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGACAAAAGCCAAGTGCAATTTCCTTCACCATGAATGTTCTTCTTGGGAAAGGAAATACGGTGATGGTTAATGAACCGGCTTACCCAGTGCTGAAGTATCCTTTTAAGTGCCTAGCCTAACAACAGGAAATCCGTGCACTCTGTCTCCTGTGTACATTCTAAAAGCTGATATTCAAAGAGAATGCTTGTCATCGCCTTTTGTCAGCCTTGAACGGGCAAGTGACACTGTGGACCTCGGTCACCTCCCTCCCTGAAGCCAGTGCGCCTGTGCATTTGCAACATTTGTTTTAAGTTCTGGCACCGTCAtgtgctgacaccactgcatgtCAGAAAATCCAAATACAGCAGCCTGAGGAGACGCTGTCAGGCTCTGTGTGGGCATTGTGCTTATTTGAATAAAGGTGAAAAGGACCAACCACTA