Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Tpi1
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name triosephosphate isomerase 1
Also known as TIM|Tpi|Tpi-1
Coordinate chr6:124787549-124791121
Strand -
Gene summary Enables triose-phosphate isomerase activity. Involved in glyceraldehyde-3-phosphate metabolic process. Acts upstream of or within glucose metabolic process. Predicted to be located in nucleus. Predicted to be active in cytosol. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Used to study triosephosphate isomerase deficiency. Human ortholog(s) of this gene implicated in carbohydrate metabolic disorder and triosephosphate isomerase deficiency. Orthologous to human TPI1 (triosephosphate isomerase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tpi1

Retroname Coord Strand Genomic Region ENSG
Tpi1P4 chr10:18977293-18978497 + Intergenic
 ENSMUSG00000110770 UCSC
Tpi1P5 chr10:44465920-44468984 + Intergenic
 ENSMUSG00000111730 UCSC
Tpi1P6 chr13:25640032-25640408 + Intergenic
 ENSMUSG00000083919 UCSC
Tpi1P7 chr14:5521818-5523044 - Intragenic
 ENSMUSG00000114890 UCSC
Tpi1P8 chr18:20681084-20682415 - Intergenic
 ENSMUSG00000117627 UCSC
Tpi1P1 chr3:66035941-66037173 - Intragenic
 ENSMUSG00000097968 UCSC
Tpi1P2 chr6:127159815-127160682 - Intergenic
 ENSMUSG00000106755 UCSC
Tpi1P3 chr9:31859640-31860812 + Intergenic
 ENSMUSG00000111166 UCSC

Expression

Transcript Sequences

>NM_009415.3
GTTTGTACTGACCTTCAGAGACTTGAGCCTGGTACAATGGCGCCTACCAGGAAGTTCTTCGTTGGGGGCAACTGGAAGATGAACGGGAGGAAGAAGTGCCTGGGAGAACTCATCTGCACCCTGAACGCAGCCAACGTGCCGGCAGGCACCGAGGTGGTTTGTGCACCGCCCACCGCTTACATCGACTTTGCCAGACAGAAGCTGGATCCCAAAATTGCTGTGGCCGCACAGAACTGCTACAAAGTGACCAATGGGGCCTTCACTGGGGAAATCAGccCTGGCATGATCAAAGACTTAGGAGCCACCTGGGTCGTGCTGGGGCACTCAGAAAGAAGACATGTCTTTGGAGAATCAGATGAGCTGATTGGCCAGAAAGTGAGCCACGCCCTAGCAGAGGGACTCGGGGTGATCGCCTGCATCGGGGAGAAGCTAGACGAAAGGGAAGCCGGCATCACCGAGAAGGTCGTGTTCGAGCAAACCAAGGTCATCGCAGATAATGTGAAAGACTGGAGCAAGGTGGTCCTGGCCTATGAACCTGTGTGGGCCATTGGGACTGGCAAGACGGCAACCCCTCAGCAGGCACAGGAAGTACACGAGAAGCTCCGGGGATGGCTGAAATCCAATGTCAATGATGGGGTGGCTCAGAGCACCCGGATCATTTATGGAGGTTCTGTGACTGGAGCAACCTGCAAAGAGCTGGCAAGCCAGCCTGACGTGGACGGCTTCCTTGTGGGTGGCGCATCTCTCAAGCCTGAATTTGTGGACATCATCAATGCCAAACAATGAGCACTGCCCATCCCTCTACCTGCCTGCATAGCATGGACTAGGTTGCCCAGAAGTTTAGTAACTGCTCCCACCGGTCACATGCTTCTGATGACATCATCTGCCCCATCTTGTGGCCTAATCCACGCTGTACCCTCCTGAGCCGTTTCCACCGCCCTATTATGGTTGGGACCAGGCCAATCCCTTTACCACTTACAGTGGGTAGAATCAACTGTCACCAAGGTGGCTCCTAGTGAGGGGAGGGAGTAGAACTGACTGTCCCTTTGGGCCCTGACAAGTGAAATCACCTTCCATTGGTTTGGGCTGGAAACTCATGGTTGGAGCACAGGAAGTGGGCTTCGTGTCACTTTGGCCTGTCACTTAGATGGCCTTGGCTCTAGCTTCACTCCCAAGTTCTACTGGATGTCTGATGCAGAAATTCAGAGCTTTCGGGTCTGAATTCGGTATACATGAGACCCTAAGAGGCCTGGGATAGTCCCCTCCCCCACGGTGCCAAAGCCCCTGTATTGTGTTTGTGAACCATCCTACATGTAAGGGAAATAAACACCTGGGCCTGAGCTTTGTGGGTTGTCATAATTCCTTAAGACAGTGATGGGGCTCtagcctggggtgggggagtgtaaaacaaaacaaaaaacaataatgaAACAGGTTGTGACAATACATCTCATTTTTTACTTCAAAAA