RCPedia: Genes

Summary

Gene Name	Traf4	Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie	Mus musculus
Full Name	TNF receptor associated factor 4
Also known as	A530032M13Rik\|CART1\|msp2
Coordinate	chr11:78049249-78056405
Strand	-
Gene summary	Enables protein kinase binding activity. Acts upstream of or within respiratory gaseous exchange by respiratory system and respiratory tube development. Predicted to be located in cytosol; fibrillar center; and nucleoplasm. Is expressed in several structures, including alimentary system; branchial arch mesenchyme derived from neural crest; central nervous system; genitourinary system; and sensory organ. Orthologous to human TRAF4 (TNF receptor associated factor 4). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Traf4

Retroname	Coord	Strand	Genomic Region	ENSG
Traf4P1	chr16:45353485-45354847	-	Intergenic	ENSMUSG00000089630	UCSC

Expression

Transcript Sequences

>NM_009423.4
GGCCGCCAGTCGGCGCCGCCCGCAGCCGGGAAACGCGGCCCGAGCGAGGCGCGGGCTGTGGGGCCGCCGCGTGCCCGGCCCCGCTCGCCCGTGCCCGCTGCCAGCCCGCCATGCCCGGCTTCGACTACAAGTTCCTGGAGAAGCCCAAGCGGCGGCTGCTGTGCCCACTGTGCGGGAAGCCCATGCGCGAGCCTGTGCAGGTGTCTACTTGTGGCCACCGCTTCTGCGACACCTGCCTGCAGGAGTTTCTCAGTGAAGGAGTCTTCAAATGCCCTGAGGACCAACTTCCTCTGGACTATGCCAAGATCTACCCAGACCCAGAGCTGGAGGTCCAGGTGTTAGGCTTGGCTATCCGCTGCATCCACAGTGAGGAGGGCTGCCGCTGGAGCGGGCCACTTCGTCATCTACAGGGCCACTTGAACACTTGCAGCTTCAATGTAGTCCCCTGCCCTAATCGCTGCCCAGCCAAGCTGAGCCGGCGTGACCTGCCTGCCCACCTGCAGCACGACTGCCCTAAGCGCCGCCTCAAGTGTGAATTCTGTGGCTGTGACTTCAGTGGGGAGGCCTACGAGAGTCACGAGGGCGTGTGCCCCCAAGAGAGTGTGTACTGTGAGAACAAGTGTGGGGCCCGCATGATGAGGCGACTGTTGGCCCAGCATGCCACGTCTGAGTGCCCCAAGCGCACCCAGCCCTGTGCCTACTGTACCAAGGAATTTGTTTATGACACCATCCAGAGCCACCAGTACCAGTGCCCACGCCTGCCTGTTCCCTGCCCCAACCAATGTGGAGTGGGCACTGTGGCCCGGGAAGACCTGCCCACCCATCTGAAGGATAGCTGCAGCACTGCCTTTGTTCTCTGCCCTTTCAAAGAGTCTGGCTGCAAGCACAGGTGCCCTAAGCTGGCAATGGGACGTCACGTGGAGGAGAGCGTAAAGCCACATCTGGCTATGATGTGTGCCCTGGTGAGCCGACAGCGGCAAGAGCTGCAGGAGCTGCGAAGAGAGCTGGAAGAACTATCCATAGGCAGCGATGGAGTGCTCATCTGGAAGATTGGCAGCTATGGGCGTCGTCTACAAGAGGCCAAGGCCAAGCCTAACCTGGAGTGCTTCAGCCCAGCCTTCTATACGCATAAGTACGGCTACAAGCTGCAGGTGTCTGCATTCCTCAACGGCAACGGCAGTGGTGAGGGCACACACCTCTCCATCTACATCCGTGTCTTGCCGGGCGCCTTTGACAATCTCCTTGAGTGGCCCTTTGCCCGCCGGGTCACCTTCTCCCTGCTGGATCAGAGTGACCCAGGTTTGGCTAAGCCACAGCATGTCACTGAGACCTTCCACCCTGATCCAAACTGGAAGAACTTCCAGAAGCCCGGCACGTGGCGAGGCTCCCTGGATGAGAGTTCTCTGGGCTTCGGCTACCCCAAGTTCATTTCCCACCAGGACATCCGAAAGCGGAACTACGTGCGGGATGATGCGGTTTTCATCCGTGCCTCTGTCGAACTGCCCCGGAAGATCCTCAGCTGAGTAGAGCCTTTTGGCTTCAAGTGGGAAGGGAGGCGGGACTGGATCTGAAACTGGATTGGGGGCCGGACCTCCTTTCAGCTTCTTTTGCCTAGGCTGTTAGCCCACtctccctaccaccaccaccaccaccaccaccatccctacCCCTCAGGTGCCTCCAATTGGTGCTTCAGCCCTGGCCCCTGGGGGGAGCAGGTCTCGGGGTTATCAAGGGCTGGAAACACGATCCCAGGGCCTGTCTcccctcctgggcagggcagacatgCCTTGATGCCAGCCACATTCTACCTGGACTGAGGTGCCTGCTCAGGTGCTATGTCCCAAGAGCCatagtgggggtgggaggtattGGCAAAGGGAGGGGTAAGGGTAGTTAGAAGAATCTGCCTTGAGATTAACTTCTCTTTCCATTCACCCAGTGGTGCCCTCTCTGGTTATTTATTTCTCTAGTGCTAGGTGGGCACAGCAGGGGAACTCTGATTTTTAATAAATCCTGAATTGTATTTATTAACCTGATTCCAGCCTGTCTCCTCCCAGTAGGTTAGGGTTCTGGGAGGCTGGGcccagccagaggagaggggtgaactgctctgcttgcagccatACCTCTCTAGTGGACGATATGGGGATTGCAGGAAACTTGGAGTGGGAGCATCACCTGCCCTCTGGTGGTTCAATAGATAGGTGCAGTTACCACTTAAGCTGGCATCTCCAGTCCATACCTCACCAAAGACAAGTGCTGCTTAGCGGGGCTGTCTATATCAGTAAtaaccatgtgtgtgtatgtgtgcaggccAAAGATCAACATCAGGGGTCTTCCTCAGTTACACTCCACCTTTTTGAGACAGATCAAAAATCCTGGAGTTTGCTGATTCCACAAGACTCTATCTTCCCTCGGCTGATCCAGCAGCCTGGGTGGTACCGGTGTGCATTGCCGTATCCAGTCTTGTACTCCAAGGCCATCTTTACAGCCTGAAGTCTTGTGGCCAGGAGTCAAGGGAAGTAGCTTTTCCCCTTAGAGTCACTGTTAGAGTTAATGAGGCTGCATGTGCCTGACAGATGAAGgactgagtgagtgagtgagtgtcaGTCTGTACTCCAGGAGTAAAGAGGCCTTTGAGATGTAGAAAGCACTTAAGATTTTCTCACCTGTaatttcatttgctttttgtGCAGTTCTGAATGGCTGCCTCTGTGACCAGAGGCAGTGCATTTCACCAGTCAACTAAGAATAGAAGCAAACTGACTCCTTCAGTTAGTTTGGGGCAAAGTCTGGATTTCTGTGGGGTCCCCTCACCCCCACCGTGCATGCCAGACTCAACTACATACATGCTCAAACCCTAAATTCTTTATCAGTAGGCGTATAGTTCCCACTAATTTTGGCAATAAATTTGGGCTTGCTTTCAGCAAGTTACTTAGCTTTGTGGGGTTAACTCCACTTATTAATGGTAAAATGAATTCTGTTCAACTACTGGTATTGGAATATAATCATG