Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Tpt1
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name tumor protein, translationally-controlled 1
Also known as TCTP|Trt|p21|p23
Coordinate chr14:76082472-76085743
Strand +
Gene summary Predicted to enable calcium ion binding activity. Involved in negative regulation of ectoderm development and stem cell population maintenance. Located in nucleoplasm. Is expressed in sciatic nerve and testis. Orthologous to several human genes including TPT1 (tumor protein, translationally-controlled 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tpt1

Retroname Coord Strand Genomic Region ENSG
Tpt1P7 chr17:53773485-53774331 - Intergenic
ENSMUSG00000117111 UCSC
Tpt1P1 chr3:101140803-101141414 + Intergenic
ENSMUSG00000083546 UCSC
Tpt1P2 chr4:54564684-54565330 + Intergenic
ENSMUSG00000081428 UCSC
Tpt1P3 chr6:99854579-99855393 - Intragenic
ENSMUSG00000084319 UCSC
Tpt1P4 chr7:58577226-58577731 + Intergenic
ENSMUSG00000109261 UCSC
Tpt1P5 chr9:37607794-37608482 + Intragenic
ENSMUSG00000059252 UCSC
Tpt1P6 chr9:98807010-98807493 - Intragenic
ENSMUSG00000101240 UCSC
Tpt1P9 chrX:87432164-87432698 + Intergenic
ENSMUSG00000081877 UCSC
Tpt1P8 chrX:100812095-100812865 + Intergenic
ENSMUSG00000084284 UCSC

Expression

Transcript Sequences

>NM_009429.3
AGTTCCGGGGGAGCCGCGGACGGTGACGTAGCCGAGCGTGCCCTCTATATGAGGTTGGGGAGCGCCCGCGTCGGCCTTTTCCGcccgctcccccctccccccgcgcGCCGCTCCGGCTGCACCGCGCTCGCTTCCGCGCTGTCAGGCTAGCGCCGCCGTCCCCAGCCGTCACCATGATCATCTACCGGGACCTCATCAGCCATGACGAGCTGTTCTCCGACATCTACAAGATCCGGGAGATCGCGGACGGGCTGTGCCTGGAGGTGGAGGGCAAGATGGTCAGTAGAACAGAGGGTGCCATCGATGACTCGCTCATCGGTGGAAATGCTTCCGCTGAAGGTCCGGAGGGCGAAGGTACCGAAAGCACAGTAGTCACCGGTGTTGACATTGTCATGAACCATCACTTACAAGAAACCAGCTTCACAAAAGAGGCTTACAAAAAGTACATCAAAGACTACATGAAATCACTCAAAGGCAAACTTGAAGAGCAGAAACCAGAAAGAGTAAAGCCTTTTATGACTGGAGCTGCAGAGCAGATTAAGCACATCCTTGCTAATTTCAATAACTACCAGTTTTTTATTGGTGAAAACATGAATCCAGATGGTATGGTTGCTCTCCTGGACTACCGTGAAGATGGTGTGACTCCATTCATGATTTTCTTTAAGGATGGCTTAGAGATGGAGAAATGTTAACAAATTGGATCTATCACCTGTCACCATAATTGGCTGCTGCTTACCATCCATACAACACCAGGACTTAGGACAAATGGGACTGATGTCATCTTGAGCTTTTATTTTGACCGTGATTTATTTGGAGTGGTGGCattgtttttttaaggaaaaaaaacatgtcATGTGGGTTGTCTAAAAATAAAGTGCATTTAAATCCACTTAA