Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl13a
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L13A
Also known as 1810026N22Rik|Tstap198-7|tum-antigen
Coordinate chr7:44774987-44778169
Strand -
Gene summary Enables mRNA binding activity. Involved in cellular response to interferon-gamma and negative regulation of translation. Acts upstream of or within several processes, including lung morphogenesis; macrophage chemotaxis; and response to lipopolysaccharide. Part of GAIT complex and ribonucleoprotein complex. Orthologous to human RPL13A (ribosomal protein L13a). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl13a

Retroname Coord Strand Genomic Region ENSG
Rpl13aP4 chr11:86521229-86521889 - Intragenic
ENSMUSG00000083992 UCSC
Rpl13aP5 chr13:85121558-85122447 - Intergenic
ENSMUSG00000114338 UCSC
Rpl13aP6 chr14:74689364-74689526 + Intergenic
ENSMUSG00000115427 UCSC
Rpl13aP7 chr15:23489954-23490969 + Intergenic
ENSMUSG00000115193 UCSC
Rpl13aP9 chr19:50018538-50019195 - Intergenic
ENSMUSG00000062083 UCSC
Rpl13aP2 chr4:83515626-83516248 + Intragenic
ENSMUSG00000098217 UCSC
Rpl13aP1 chr4:149899237-149899428 - Intergenic
ENSMUSG00000083173 UCSC
Rpl13aP3 chr9:94289345-94290144 - Intergenic
ENSMUSG00000101949 UCSC
Rpl13aP10 chrX:35477160-35477810 - Intergenic
ENSMUSG00000081159 UCSC
Rpl13aP8 chr16:45870026-45870257 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_009438.5
GACCTCCTCCTTTCCCAGGCGGCTGCCGAAGATGGCGGAGGGGCAGGTTCTGGTATTGGATGGCCGAGGCCATCTTCTTGGCCGCCTGGCGGCCATTGTGGCCAAGCAGGTACTTCTGGGCCGGAAGGTGGTGGTCGTACGCTGTGAAGGCATCAACATTTCTGGAAACTTCTACAGAAACAAGTTAAAGTATCTGGCCTTTCTCCGGAAGCGGATGAATACCAACCCCTCCCGAGGCCCCTACCACTTCCGAGCCCCCAGCCGCATTTTCTGGCGCACTGTGCGAGGCATGCTGCCCCACAAGACCAAGAGAGGCCAGGCTGCCCTGGAGCGCCTCAAGGTGTTGGATGGGATCCCTCCACCCTATGACAAGAAAAAGCGGATGGTGGTCCCTGCTGCTCTCAAGGTTGTTCGGCTGAAGCCTACCAGAAAGTTTGCTTACCTGGGGCGTCTGGCGCATGAGGTCGGGTGGAAGTACCAGGCAGTGACAGCCACTCTGGAGGAGAAACGGAAGGAAAAGGCCAAGATGCACTATCGGAAGAAGAAGCAGATCTTGAGGTTACGGAAACAGGCAGAAAAGAATGTGGAGAAGAAAATCTGCAAGTTCACAGAGGTCCTCAAGACCAACGGACTCCTGGTGTGAACCCAATAAAGACTGTTTGCCTCATGCCTGCCTGGCCTGCCCTTCCTCCGCCGCCAACTAGGGAAGTGGGGACCAAAGGTTCCTTAGGCACTGCTCCTGTGGGTAGAGGGGACATTAGAGAGCTGACAGCGCACCACCTGCATGAGTTTTTATTAAAGTGCAAACCATGGGATGAATCAGTTGAGCTTCAGTGTTGAAAATGAGTAGCAGGGCTGCCCCACCCACCTGACCAAGTACCCTATTCTGCAGCTATGAAAATGAGATCTGCACATGAGCTGGGGTTCACAAGTGCACACTTGGAGCACTGCCTTGCTCCTTCCCAGCAGACCACAAAGCAGTATTTTTCTGGAGGATTTTATGTGCTAATAAATTATTTGACTTAA