Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Uba52
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ubiquitin A-52 residue ribosomal protein fusion product 1
Also known as Cep52|D8Ertd21e|Gm1863|Rps27a|Ubb|Ubc
Coordinate chr8:70960913-70963067
Strand -
Gene summary Predicted to enable protein tag and ubiquitin protein ligase binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in modification-dependent protein catabolic process and protein ubiquitination. Located in synapse. Orthologous to human UBA52 (ubiquitin A-52 residue ribosomal protein fusion product 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Uba52

Retroname Coord Strand Genomic Region ENSG
Uba52P11 chr10:73111669-73111867 + Intragenic
ENSMUSG00000112838 UCSC
Uba52P15 chr11:96686197-96686657 - Intragenic
ENSMUSG00000081249 UCSC
Uba52P13 chr11:62442971-62443883 + Intergenic
ENSMUSG00000019505 UCSC
Uba52P1 chr2:172963017-172963381 - Intragenic
N/A UCSC
Uba52P8 chr7:90442523-90442793 + Intragenic
Intragenic
N/A UCSC
Uba52P12 chr11:60451689-60452144 - Intergenic
ENSMUSG00000096745 UCSC
Uba52P20 chrX:156450573-156450781 - Intergenic
ENSMUSG00000083166 UCSC
Uba52P16 chr14:46321582-46322266 + Intergenic
ENSMUSG00000044285 UCSC
Uba52P14 chr11:73662749-73662976 - Intergenic
ENSMUSG00000081552 UCSC
Uba52P2 chr3:5815963-5816191 + Intergenic
ENSMUSG00000103034 UCSC
Uba52P5 chr5:125463292-125464413 - Intergenic
N/A UCSC
Uba52P17 chr16:49232600-49233009 - Intergenic
ENSMUSG00000116948 UCSC
Uba52P18 chr18:35669594-35670068 + Intergenic
ENSMUSG00000062742 UCSC
Uba52P3 chr3:95871430-95871747 - Intergenic
ENSMUSG00000106640 UCSC
Uba52P6 chr5:29924263-29924717 - Intergenic
ENSMUSG00000105032 UCSC
Uba52P9 chr9:19839122-19839619 - Intergenic
ENSMUSG00000091460 UCSC
Uba52P10 chr9:72081791-72082282 - Intergenic
ENSMUSG00000061390 UCSC
Uba52P21 chrX:161349806-161350308 + Intragenic
Intragenic
ENSMUSG00000059461 UCSC
Uba52P4 chr4:3973116-3973595 - Intergenic
ENSMUSG00000068240 UCSC
Uba52P7 chr5:44456187-44456405 - Intergenic
N/A UCSC
Uba52P19 chrX:151949607-151950033 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001348227.1
AGTGCGCAGGCGCTCTCAGAGGAGACTAGGGGGTTTCCGGTTCCGCTGTCCTCTTTCTCTTCAACGAGGCGGCCGAGCGGACGCCAACATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTGACCAGCAGAGGCTGATATTCGCGGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTGCGCGGTGGCATCATTGAGCCATCCCTTCGTCAGCTTGCCCAGAAGTACAACTGTGACAAGATGATCTGCCGCAAGTGCTACGCACGCCTGCACCCTCGTGCAGTCAACTGCCGCAAGAAGAAGTGCGGCCATACCAACAACCTGCGCCCCAAGAAGAAGGTCAAATAAAGCTGTGGTCATACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGGAGCAGTAA
>NM_001348228.1
AGTGCGCAGGCGCTCTCAGAGGAGACTAGGGGGTTTCCGGTTCCGCTGTCCTCTTTCTCTTCAACGAGGCGGCCGAGCGGGTTGGTGCCGTCCGCGTCGCGGCTGGGCTGTTGGCGGCTGGGCCTGGGCGGGGACGCGGCGGGGGTCGGCGAGGCGACTGTAGGGGTTCGCGGGCGCCGCTTCGGCGTCGTGCATGTTCGGTGGGACTCGGCCGCCAGGACCTGGGCGCGCGGCGGGCACGCGGCAGTGCAGCCCGGGCGCTGCGGGCGGAAGACCAAGGGCACTGACCTGAGCTCCAGGCAGACGCCAACATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTGACCAGCAGAGGCTGATATTCGCGGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTGCGCGGTGGCATCATTGAGCCATCCCTTCGTCAGCTTGCCCAGAAGTACAACTGTGACAAGATGATCTGCCGCAAGTGCTACGCACGCCTGCACCCTCGTGCAGTCAACTGCCGCAAGAAGAAGTGCGGCCATACCAACAACCTGCGCCCCAAGAAGAAGGTCAAATAAAGCTGTGGTCATACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGGAGCAGTAA
>NM_001348229.1
GCGGTGAACTGCTCTCACCTCAGCACCTGAGAAGCAGGGCATAGTTGAGTCCAGCCGGCCCTATTGAGAAGAAACCTTTGCTGTCCGATCCTTCAGTTGGAAGGCACTCTTGCTGGGGTGGCAAGCTGTTGGGTAGGATTTCCCGACCCACCGGGTGGTGGTGACTGGCAGAGTGGGACTGCTGAGCCGTAGTCCGCAGCAGGATTTGGCTTTTTGGTAGTAAAGGTAACTAAGAAATAAGCAGTCTTAGGTGGTTAGTAGAAGCCGACGGACCTCTGTCTTTTACTCATGCGTCTCCTTCTGATGTGTAGCAGACGCCAACATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTGACCAGCAGAGGCTGATATTCGCGGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTGCGCGGTGGCATCATTGAGCCATCCCTTCGTCAGCTTGCCCAGAAGTACAACTGTGACAAGATGATCTGCCGCAAGTGCTACGCACGCCTGCACCCTCGTGCAGTCAACTGCCGCAAGAAGAAGTGCGGCCATACCAACAACCTGCGCCCCAAGAAGAAGGTCAAATAAAGCTGTGGTCATACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGGAGCAGTAA
>NM_019883.4
AGTGCGCAGGCGCTCTCAGAGGAGACTAGGGGGTTTCCGGTTCCGCTGTCCTCTTTCTCTTCAACGAGGCGGCCGAGCGGCAGACGCCAACATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTGACCAGCAGAGGCTGATATTCGCGGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTGCGCGGTGGCATCATTGAGCCATCCCTTCGTCAGCTTGCCCAGAAGTACAACTGTGACAAGATGATCTGCCGCAAGTGCTACGCACGCCTGCACCCTCGTGCAGTCAACTGCCGCAAGAAGAAGTGCGGCCATACCAACAACCTGCGCCCCAAGAAGAAGGTCAAATAAAGCTGTGGTCATACCTGGCATGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCCACTGGAGCAGTAA