Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ube2l3
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ubiquitin-conjugating enzyme E2L 3
Also known as UbcM4|Ubce7
Coordinate chr16:16969879-17019376
Strand -
Gene summary Enables ubiquitin conjugating enzyme activity. Acts upstream of or within ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm. Predicted to be part of ubiquitin ligase complex. Predicted to be active in nucleus. Is expressed in several structures, including brain; heart; immune system; lung; and reproductive system. Orthologous to human UBE2L3 (ubiquitin conjugating enzyme E2 L3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ube2l3

Retroname Coord Strand Genomic Region ENSG
Ube2l3P9 chr10:27812328-27813027 + Intergenic
ENSMUSG00000064208 UCSC
Ube2l3P10 chr13:16220198-16220887 + Intergenic
ENSMUSG00000113715 UCSC
Ube2l3P11 chr17:15541565-15542153 - Intergenic
ENSMUSG00000116647 UCSC
Ube2l3P12 chr17:16053211-16053852 - Intergenic
ENSMUSG00000116934 UCSC
Ube2l3P2 chr3:35600023-35600693 + Intergenic
ENSMUSG00000105040 UCSC
Ube2l3P3 chr3:74149423-74149904 - Intergenic
ENSMUSG00000096400 UCSC
Ube2l3P4 chr3:74149901-74150059 + Intergenic
ENSMUSG00000096400 UCSC
Ube2l3P5 chr3:87114644-87115338 - Intergenic
ENSMUSG00000074506 UCSC
Ube2l3P6 chr5:22768778-22769453 + Intergenic
ENSMUSG00000105156 UCSC
Ube2l3P8 chr8:61816847-61817526 - Intergenic
ENSMUSG00000056943 UCSC
Ube2l3P13 chrX:150825842-150826517 - Intragenic
Intragenic
ENSMUSG00000083474 UCSC
Ube2l3P1 chr3:153399334-153400020 - Intragenic
N/A UCSC
Ube2l3P7 chr7:33494592-33494893 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_009456.2
ATTTTGGGAAAGCAGCAGCACCAGATCCAAGATGGCGGCCAGCAGGAGGCTGATGAAGGAGCTTGAAGAGATCCGCAAATGTGGAATGAAAAACTTCCGTAACATCCAGGTTGATGAAGCTAATTTATTGACTTGGCAAGGGCTTATTGTTCCTgacaaCCCTCCATATGATAAGGGAGCCTTCAGAATTGAAATCAACTTTCCAGCAGAGTATCCATTCAAACCACCCAAGATCACATTTAAAACAAAGATCTACCACCCTAACATCGATGAGAAGGGGCAGGTCTGTCTGCCAGTCATTAGTGCTGAAAACTGGAAGCCAGCCACCAAGACTGACCAAGTAATCCAGTCCCTCATAGCACTGGTGAATGACCCCCAGCCTGAGCACCCACTCCGGGCTGACCTAGCTGAAGAATACTCTAAGGACCGTAAAAAATTCTGTAAGAATGCTGAAGAGTTTACAAAGAAATATGGGGAAAAGCGACCTGTGGACTAAAATCTGCCATGAGTGATTCCAGCAAGTTTGAGCAGAGACCCCGAGCAGTGCATTCAGACACCCCGCAAAGCAGGACTCTGTGGAAATTGACACGTGCCACCAACTGGCGTCCGCTTGTGGCAGTTACTAACTTTCTACAGTTTTCTTAATCAAAAGTGGTCTAGGTAACCTGTAAAGAAGGATTAAAAAATTCAGATGTTCTAGTtctgcttgctttgttttaaaaatcactgCTTTAGTCTACTTCAAAAGAATGGCATTTCTTTTCTTGCCCAAATTTACTCAAAGTTGCAGTTAGCCCAGAAGGTTTAAAGAAAAAGGTTGTTGTggtttcttcccccttcccctctccccacttttCGATTCCCACTTCCACAGACCAAGGCCCCAGCTCCCCACAGAGGTGGCCGCAGCACTGACAACGTTTCCTGTGCCAACACTGCCTGTGGGTAATGAGTAGCTCACGCACCCCATTCCAGCTTAGTgatgtctttaaaaaattataaaacagtaTCAATGCCCTGTCCCAAAGGAACATCCATGCAAACAAAGAGAAGCCGTCTTTACGTAAAATTTTAGCAAAGGGTTTCCACAATAATAATAGACCCGACAGACAGACCCCCATGGTCCCTATCTGTAGTCAGACTGTGCTGGCTGGGTCTCTGCAGGGAACCTGTTATAGCAGGTTTGTGGTGACCTTGGAGGGAGGGTCTGCCAGCAGAGAATACAGTGCGCTTGTGTGATGGACTTCTCACAGTCAGCAGCCCTTCCTGAAGCTGTGGTAGACCTGGTCatcacagaccaaaaaaaaaaaaaaaggccagaatATTCTTTTGAAATTTCAAGCTTCTCTACCACCAAGCTCTGATAGGATGTGCCAAGGAGAGCTCCCACTCCTGAGCACAGCAGGCCACCACTGCCACCCTCCTCACGGCTTACCCTCAGCGGGGTCAGCCACGATGGCTCTGCCTCTCTCAGAGCAGCTGCTGGGACAGCCCAGGAACAGGGTGGCTTTTCCCTCCCTCTGGACTCCAAACCTTTCCAGTCCGGCTCCACTTGAAGCTCACTCAATATCCTTTCAGtgtgttttatattgttttgatTGCCTTTTTTTTGTagaaataaaatttgagcttagaatttatcatcaaatgaACTCTGTCAAGATTTGAATGTTAAATGTCTTTTCAAGGGAAGTGGGACGGACTGTCCTTGACGCAGTAGTGACACCCTGAGGAAGCTGATGGCCTGACTGCCCATGTTCACCAACTCACTTCTGCTACTAGGGGTCTAATCCTGTGGAGAAGATTGCCTCAAGAAACCTTGCTTTCTGCTTTAACCTTAGTTCTATAACTTCCGGGCTACCTAGGCTTACAGACTTGGGAGACAGCTCTGGGTTTTGCCTATAAAAGAAGTAAGACATGTCCTCTCAGGCAGTGTAACACTATTTAGTTTTCCAAGTGTTTGGCTCCTGTGATGCATAAATGAACTATGCTTTAGTTCAAGTTATGCATGGGGCAGGTTTCTGGAGACTTCCATATGCCCAGGATGGTCAGAGCCCTGGGCCTGTGTTTCTACATCTGTCTCTTCATTGGCAGAAAAGTGACAATGGATTTTATTTCACTCATATTCAGATTTGTAATAAAATGCCAAACTCTGTCAGAATTGTCGAAGCAAACCACCATTTTGTTCATGTTGCTTTTCTGAATCTAGAGATAGTCCAGCTGTCTCATTGCTTAGCTCTACCTGCCTGTTACCCGTCACTGCTCTCTGCTCACTATGGGAGGGTACTCTTATGCCAGCAGCCCCTCTCAGGGACTCTCAGCCCCATTGTTGACAACCATGGCCTGCCCTGCCTTGGAGTCAGTGGTGTCCCTCTGGGCTTGCATGCCTTGTCCTGTCCAGCCCTGCCCTGAGCAGGCTTTGAGCAAGGTGGCAGGGAGACCTGTGGAGCAGCCACCCACGCCTGACCCAAGCTGGCTCAGGAATCCACATCCCCCTGGTTCCTTGAAGTGCCCGGGTCTCGTCCTGCTCTTCCCACAATGGCAGAGAATAGGCTTTCTAAGATGCTGTGACCCCATTCTGTCCTTAATAAAAATGTTCTCAGACATTA