Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ube2i
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ubiquitin-conjugating enzyme E2I
Also known as 5830467E05Rik|UBC9|Ubce2i|Ubce9
Coordinate chr17:25479484-25494965
Strand -
Gene summary Enables HLH domain binding activity. Involved in negative regulation of transcription by RNA polymerase II. Acts upstream of or within positive regulation of I-kappaB kinase/NF-kappaB signaling. Located in nuclear body. Is expressed in several structures, including early embryo; forebrain; forelimb bud; limb; and oocyte. Orthologous to human UBE2I (ubiquitin conjugating enzyme E2 I). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ube2i

Retroname Coord Strand Genomic Region ENSG
Ube2iP3 chr15:43671835-43672741 + Intergenic
 ENSMUSG00000115407 UCSC
Ube2iP1 chr2:157743371-157744448 + Intergenic
 ENSMUSG00000062846 UCSC
Ube2iP4 chrX:10526710-10529157 + Intergenic
 ENSMUSG00000068200 UCSC
Ube2iP2 chr8:31704392-31705389 - Intragenic
Intragenic
 ENSMUSG00000083588 UCSC

Expression

Transcript Sequences

>NM_001177610.1
CCGCTGGGGTCCTGCGCTCCGTGCTGCGCGCGGCGGGCGCGGAGGGAAGTCCCGAGACAAAGGAGCGCCGCCGCCTCTGCCGCCGCGACGGTCCGGGCCGCGGTCGCCCAGGGACTTTGAATATGTCGGGGATCGCCCTCAGCCGCCTTGCGCAGGAAAGGAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGATGGCACAATGAACCTGATGAACTGGGAGTGCGCTATCCCTGGAAAGAAGGGGACTCCATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTTTCAAAGATGACTATCCGTCCTCACCACCAAAATGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACAAGGACTGGAGGCCAGCTATCACCATCAAACAGATCTTATTAGGAATACAAGAACTTCTAAATGAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCCTACACAATTTACTGCCAAAACAGAGTGGAATATGAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTTGCCCCCTCATAAGCAGCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTATTTTTGATTATTAAGTaaaacttgcttttattttaatattgatgTCAGTATTTCAACTGCTGTAAAGTGATAAACTTTTGTACTTGGTAAGCCCCTAGCAGCTAGTTTCTTTGCGTCGCGCTCGGATGCAGGCATGCTTCCCACTGTTCAGAGCTCTGGCTTCCATCTGGCTGTGTGACAGAACCACActgtccctccttccctaccCTCGTCCTTCTCAGAAACCTGGGCTGTTGCTTATGAGCCTCAGATCCAAAGTTGGCCAGCATTTCCATCCTGCACCACTTCCTTTGTGTTTATATGGCGTTTCGTCTGTGTTGCTGTTTAGAGTAAATAAACTGTTTATATAAAGGTTTTTGTTGCATTATCATCATTAAAATGTGAGGAGGTATCTATCTCAGTACACCTGGCCCTCCTCACATGGCTGCAGTCCTTGCCAGGCACCAAGGCTGAGCCCCAGGACCAGCACCTAGGAGGTCTCAGCTTCTGCTAGGGATATGCCCAGGCCCCATgcagctccatcttcatctggTTCTTTGTAAATAGGACTGTGTACAGGGATGTGTTCTGTTCTCCCCACCTGGATCTTTGGGCCTTAAGGTACCAGGCAGCGTTGAGAGCCTCATGAAGTTGGAATCCGCATCCAGCCTTCGTAAACCCAGAAAGGTGAAAGACTGGCTGATCCAGACCAAGGCTGAGGCCAGGTGAGAGCCAAGGACAAACTGGCCTGCATTGATCTCCCTGCCTGTTAGCTGTACAGTGGGCCCTGCTGTGGCCTGAATGCTAGCTTCAGGCCTTTTGGTGCCCTGCCCTTGTACCTGGAAGAGGCAGCTCTGCCACCGGCCCGGGcaaactcgggtcctctagaGCACCTGAGCACACAGCTCCTACACCTCCTGACCTGCATTCAACTCTGCCCTACGGCCCAGGAGACCAGCCTGCTGTGGCCTCGGCACAGGATGACCTCAGGTACTACTGTCCACATACTCCGCTTGCTGGAGCTGGGCTGGGTGAAGCTGCTCTTGGCAGTGGCCcacctgggctgggctgggtctGTGATCTTAGGGCTTACAGAACACAGGGAGGTGCAGTGGACATAGGCGCAGTGATCAGTCTCCATCAGACTTGTTCCTGAGGCCCCTGGAAGACCCCTGACATGGGAACCAGGCACCAGTGGCTCAAGTTCAGGGACCAATCAAGGGGTGGCCAGGTCTGCAGCCAGGAGTCTTCACTCTGGAATTGGAGGGGCTTGTGCTCACACAGCTGGTGGCACCTGGATGGGCTGGGTTGCCAGTGCCTTGTGGGCACGTTTAGCCGCCAGTACAGTCGGGAGCCGAGCTTGGATGAACAGTTTGCAGCACAAGGCCTCACCTGGGGAGCttaggctggtgtgtgtgtgtagcctgctCTCAGAATGTCTTATTTTGTAACAACTGACTACATTTAGTAATAGGTACACATGTATAtggttaatatatggaaattcaatatattttatagttaaaGTATTCTAAAGTAACTGATGTTTCTAGCAAACTGTAGTGACCCCAGCTATGAAGTGTTCCTTTTGTACCACAGTCCTTGGATTACCAGAGATGTGAATCTTGTAACATAAGAATGTGGTCTGTGACCATCCTGTGTTaagagggtggggtggagggtatccCAGCATGAAGCCTCATTGGTAAGGAATTGTGGGCAACAGATTAACCACTGTATCTACAAATGCTCTAATTAAAACATTTCCACAAACTGC
>NM_001357694.1
CCCTGGGCTCGGGCTCCTTAGGCGGTCGCGGGCAACGAGGGCGCGGCAGCCGCGTGCGGGCTGCGGGAAGCTCGTGTTTAAGTAGACGCGTAGGCCACCGGACGGGAGGGACGGGACTTTGAATATGTCGGGGATCGCCCTCAGCCGCCTTGCGCAGGAAAGGAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTAGCTGTCCCAACAAAGAACCCTGATGGCACAATGAACCTGATGAACTGGGAGTGCGCTATCCCTGGAAAGAAGGGGACTCCATGGGAAGGAGGCTTGTTCAAGCTACGGATGCTTTTCAAAGATGACTATCCGTCCTCACCACCAAAATGTAAATTTGAGCCCCCACTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACAAGGACTGGAGGCCAGCTATCACCATCAAACAGATCTTATTAGGAATACAAGAACTTCTAAATGAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCCTACACAATTTACTGCCAAAACAGAGTGGAATATGAGAAAAGGGTCCGAGCACAAGCGAAGAAGTTTGCCCCCTCATAAGCAGCGGCCCTGGGCTCCATGACGAGGAAGGGATTGGCTTGGCAAGAACTTGTTTACAACCTTTTGCAGATCTAAGTCGCTCCGTACAGTTACTAGTCGCCTGGGAGGGTTGAGCGGGCGCCATTTTCCATTTCCGCCACTGGCATATTCAGTCTTTTGTATTTTTGATTATTAAGTaaaacttgcttttattttaatattgatgTCAGTATTTCAACTGCTGTAAAGTGATAAACTTTTGTACTTGGTAAGCCCCTAGCAGCTAGTTTCTTTGCGTCGCGCTCGGATGCAGGCATGCTTCCCACTGTTCAGAGCTCTGGCTTCCATCTGGCTGTGTGACAGAACCACActgtccctccttccctaccCTCGTCCTTCTCAGAAACCTGGGCTGTTGCTTATGAGCCTCAGATCCAAAGTTGGCCAGCATTTCCATCCTGCACCACTTCCTTTGTGTTTATATGGCGTTTCGTCTGTGTTGCTGTTTAGAGTAAATAAACTGTTTATATAAAGGTTTTTGTTGCATTATCATCATTAAAATGTGAGGAGGTATCTATCTCAGTACACCTGGCCCTCCTCACATGGCTGCAGTCCTTGCCAGGCACCAAGGCTGAGCCCCAGGACCAGCACCTAGGAGGTCTCAGCTTCTGCTAGGGATATGCCCAGGCCCCATgcagctccatcttcatctggTTCTTTGTAAATAGGACTGTGTACAGGGATGTGTTCTGTTCTCCCCACCTGGATCTTTGGGCCTTAAGGTACCAGGCAGCGTTGAGAGCCTCATGAAGTTGGAATCCGCATCCAGCCTTCGTAAACCCAGAAAGGTGAAAGACTGGCTGATCCAGACCAAGGCTGAGGCCAGGTGAGAGCCAAGGACAAACTGGCCTGCATTGATCTCCCTGCCTGTTAGCTGTACAGTGGGCCCTGCTGTGGCCTGAATGCTAGCTTCAGGCCTTTTGGTGCCCTGCCCTTGTACCTGGAAGAGGCAGCTCTGCCACCGGCCCGGGcaaactcgggtcctctagaGCACCTGAGCACACAGCTCCTACACCTCCTGACCTGCATTCAACTCTGCCCTACGGCCCAGGAGACCAGCCTGCTGTGGCCTCGGCACAGGATGACCTCAGGTACTACTGTCCACATACTCCGCTTGCTGGAGCTGGGCTGGGTGAAGCTGCTCTTGGCAGTGGCCcacctgggctgggctgggtctGTGATCTTAGGGCTTACAGAACACAGGGAGGTGCAGTGGACATAGGCGCAGTGATCAGTCTCCATCAGACTTGTTCCTGAGGCCCCTGGAAGACCCCTGACATGGGAACCAGGCACCAGTGGCTCAAGTTCAGGGACCAATCAAGGGGTGGCCAGGTCTGCAGCCAGGAGTCTTCACTCTGGAATTGGAGGGGCTTGTGCTCACACAGCTGGTGGCACCTGGATGGGCTGGGTTGCCAGTGCCTTGTGGGCACGTTTAGCCGCCAGTACAGTCGGGAGCCGAGCTTGGATGAACAGTTTGCAGCACAAGGCCTCACCTGGGGAGCttaggctggtgtgtgtgtgtagcctgctCTCAGAATGTCTTATTTTGTAACAACTGACTACATTTAGTAATAGGTACACATGTATAtggttaatatatggaaattcaatatattttatagttaaaGTATTCTAAAGTAACTGATGTTTCTAGCAAACTGTAGTGACCCCAGCTATGAAGTGTTCCTTTTGTACCACAGTCCTTGGATTACCAGAGATGTGAATCTTGTAACATAAGAATGTGGTCTGTGACCATCCTGTGTTaagagggtggggtggagggtatccCAGCATGAAGCCTCATTGGTAAGGAATTGTGGGCAACAGATTAACCACTGTATCTACAAATGCTCTAATTAAAACATTTCCACAAACTGCA