Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Sumo1
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name small ubiquitin-like modifier 1
Also known as GMP1|PIC1|SENTRIN|SMT3|SMT3H3|SMTP3|SUMO-1|Smt3C|Ubl1
Coordinate chr1:59678593-59709993
Strand -
Gene summary Predicted to enable enzyme binding activity; potassium channel regulator activity; and protein tag. Involved in several processes, including positive regulation of ATPase-coupled calcium transmembrane transporter activity; regulation of cardiac muscle cell contraction; and regulation of protein stability. Acts upstream of or within several processes, including PML body organization; protein localization to nuclear pore; and protein sumoylation. Located in XY body and nuclear body. Is expressed in several structures, including alimentary system; central nervous system; eye; genitourinary system; and heart. Human ortholog(s) of this gene implicated in orofacial cleft 10. Orthologous to human SUMO1 (small ubiquitin like modifier 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sumo1

Retroname Coord Strand Genomic Region ENSG
Sumo1P1 chr2:170304672-170305810 - Intergenic
ENSMUSG00000084067 UCSC
Sumo1P2 chr3:4004119-4005276 + Intergenic
ENSMUSG00000103224 UCSC
Sumo1P3 chr7:106284232-106284417 + Intragenic
ENSMUSG00000109011 UCSC
Sumo1P4 chr10:51632908-51633132 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_009460.2
GGAAGTGACGCAAGACGTAGAGGAAGTCCCTGCAGCCGCGGTGTTGTGCTGTAGAGAAGGGACGGATTTGTAAACCTCAGAGTGAGGTTCTGCCTGCCGGAGGCCGCAGTGGTGCGGAGACCCCCGGGTGAATCCACGTCACCATGTCTGACCAGGAGGCAAAACCTTCAACTGAGGACTTAGGCGATAAGAAGGAAGGAGAATACATTAAACTCAAAGTTATTGGACAgGATAGCAGTGAGATACATTTCAAAGTGAAAATGACAACACATCTCAAGAAACTCAAAGAATCATACTGTCAAAGACAGggAGTTCCAATGAATTCACTCAGGTTTCTCTTTGAAGGTCAGAGAATTGCTGATAATCATACTCCGAAAGAActGGGAATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAAACGGGGGGTCACTCGACGGTTTagataattctttttattttttatttttcctttccctcaatccttttttatttttaaaaatagttcttttgTAATGTGGTGTTCAAAATGAAAATTGAATACTGGCACTCCATCTCTTAGAACATATGAATTCTAGTGTTCAATATTCAttattggttgtttttgttgtgctGATTTTTGGTGATCAGACCTCAGCTCCCTTAATACTGCCCTTTTTCCTTTAAGAGATTTCATGTGTGCACAGAGAGGCCACCCTTTTCAGGACTGTGCATTTTCAGGTTTGTGATGATAAAAAGATCGACCAATGGGAGCTTTCCTATGACCTTTCAATTGGCTCTGAAGTTCCAGCATGTGGTTGCTTCACTCCTGGACTGTGATTTTCAGTGGGAGATGGAAATTTTTCAGAGAACTGAACTGTGGAAAATGACCTTTCCTCAGCTTGAAGCTACTTTTAAAATCTGCGGGTCTGGACCAAAAGAAGAACATCATGTTTGTAGTCAAGATGACAGATACAGTGAGAGCAACAGCTAACTCCAAAGGTGGCTTCactggagagaaagaaagtgtcTTGAGCAAGACAGTATTGTCAGAAGATCCCAGGAAAGTTCTAATGTTCATCAGCAGTTATTAATAAAGTTACTCATACAGAAGTGTACGCAACAGACACTGCTTTTGATTCTGTTTGTACTTTTTGGCCTGGGACATGGGTTTTCAAGGGACATCGTCTGTACCAGCTtcattaaaataaacaatatttgtAAAAACATTA