Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Usp10
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ubiquitin specific peptidase 10
Also known as 2610014N07Rik|UBPO|Uchrp|mKIAA0190
Coordinate chr8:120637099-120684299
Strand +
Gene summary Predicted to enable cysteine-type peptidase activity; p53 binding activity; and transmembrane transporter binding activity. Predicted to be involved in several processes, including DNA damage response, signal transduction by p53 class mediator; cellular response to interleukin-1; and negative regulation of I-kappaB kinase/NF-kappaB signaling. Predicted to act upstream of or within DNA repair and autophagy. Predicted to be located in cytoplasm; intermediate filament cytoskeleton; and nucleoplasm. Predicted to be part of protein-containing complex. Predicted to be active in cytosol; early endosome; and nucleus. Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system gland; and liver and biliary system. Orthologous to human USP10 (ubiquitin specific peptidase 10). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Usp10

Retroname Coord Strand Genomic Region ENSG
Usp10P1 chr1:45807670-45809365 + Intergenic
ENSMUSG00000100843 UCSC

Expression

Transcript Sequences

>NM_001310630.1
ATTTGGTCCTCAAGGGTACAGGAGGCAGGGCTCCGttacccgctgagtcatctcactagcTCCTTCAACGTTTACTTTtatgttttacaaagaaaaaaaaaatctttttttccccaatgcCAGGTAAAACAAGCTAGTGAAGAGAATGAagagtgaaggaatgaatgaatgaacgaacggtCAGAAGAGCGCGCTCCATAGGGTAAGGGATCCTTGGAGATCTCCAGCGGAGATCCCAGGGCGGAGCTCAGGCGGACCCAGCGCAGTAACCACTCCGGAACTCCACCTTGCAGCCCCAGGGTGCCTGGCCAGCTCCATCCTCACGCCCTCGCCTGGAGCAGCCGCCCTCGGCGCGCTGGGGACAGAAGGGTCGCCGGCCCGGGGCGCACGCCCACCTGTCGCGCGCAGGCGCAGAACGCCGCCTGGCTCTCCCGCGGCGCAGTCAGTGCGCAGGCGCGGCGGCCGCTGCGAGTGTGTCTGTGCGGCGAGAAGATGGCGGCGACGGGAGACGCGGCGTGAGAAGCCGGAGCAGCACCGAACCTCATTGAGACGGGCCGCCATGGCCCTCCACAACCCACAGTATATCTTTGGCGATTTCAGCCCTGATGAATTCAATCAGTTTTTTGTGACTCCCCGCTCTTCTGTTGAGCTCCCTCCATACAGTGGGACTCTGTGTAGCATACAGGCTGAAGATGAACTGCCAGATGGACAGGAGCACCAGAGGATCGAGTTTGGTGTAGATGAAGTCATCGAACCTAGTGAGGGGCTGCCGCCAACTCCTAGCTACAGTATTTCAAGCACCTTGAACCCCCAGGCACCCGAATTTATCCTTGGTTGTACGACTTCTAAAAAGATCCCTGAAGCCGTTGAAAAAGATGAGACCTACAGCTCCATTGACCAGTACCCCGCCTCGGCCTTGGCTCTGGAAAGCAACTCTAACGCAGAGGCTGAGACCCTGGAGAACGACAGTGGTGCCGGCGGCCTTGGTCAGAGGGAacggaaaaagaagaagaagcggCCCCCTGGGTACTACAGTTATTTGAAAGATGGCGGTGAGGACAGTGCTTCCCCAGCCACCCTGGTCAACGGCCATGCCACCTCAGTGGGCACGAGCGGCGAGGCTGTGGAGGACGCCGAGTTCATGGACGTGCTTCCTCCAGTCATGCCCAGGACTTGTGACAGCCCTCAGAATCCTGTGGACTTCATCAGTGGCCCTGTCCCTGACAGTCCGTTCCCCAGGACACTAGGAGGCGATGCCAGGACTGCAGGGCTGTGTGAGGGCTGCCATGAAGCTGACTTTGAGCAGCCCTGCCTCCCTGCAGACAGCCTGCTAAGGACAGCTGGGACGCAGCCCTACGTTGGCACCGATACTACTGAGAACTTCGCAGTTGCTAATGGGAAAATACTTGAATCCCCGGGCGAGGACACTGCTGCCAACGGGGCAGAACTGCACACCGACGAGGGTGCAGACCTGGACCCTGCGAAGCCGGAGAGCCAGTCACCTCCTGCCGAAAGTGCGCTCTCTGCCTCTGGCGCCATCCCCATTAGCCAGCCTGCAAAGTCCTGGGCTAGTCTCTTTCATGATTCTAAGCCCTCTGCCTCCTCACCCATGGCGTATGTGGAAACTAAGTGTTCCCCCCCTGTCCCATCCCCCCTGGCCTCTGAAAAACAGATGGAAGTCAAAGAAGGGCTTGTTCCAGTGTCAGAGGATCCTGTAGCCATAAAGATTGCAGAGTTATTGGAGACTGTAACCCTAATACATAAGCCAGTGTCATTGCAACCCCGTGGGCTGATCAATAAAGGAAACTGGTGCTACATTAATGCCACCCTGCAGGCATTGGTGGCTTGCCCTCCGATGTATCACCTGATGAAGTTCATTCCTCTGTACTCAAAAGTGCAGCGGCCTTGCACATCAACGCCCATGATAGATAGCTTTGTTCGGCTCATGAATGAGTTCACTAACATGCCAGTGCCTCCCAAACCCCGCCAAGCTCTCGGGGATAAAATCGTGAGAGATATCCGCCCAGGGGCTGCCTTTgaacccacatacatatacagactcCTGACAGTCATCAAGTCGAGCCTGTCTGAAAAGGGCCGGCAGGAGGACGCAGAGGAGTATCTAGGTTTCATCCTCAATGGACTCCATGAAGAGATGCTGAGCCTGAAGAAGCTACTCTCACCCACGCACGAAAAACACTCTGTTTCCAATGGGCCCAGAAGCGACTTGATAGAGGACGAGGAGCTGGAAGACACGGGCAAGGGCAGCGAGGACGAGTGGGAGCAAGTGGGTCCCAAGAATAAGACGTCCATCACCCGGCAGGCGGACTTCGTCCAGACGCCCATCACTGGCATTTTTGGGGGACACATCAGGTCTGTGGTCTACCAGCAGAGTTCCAAAGAGTCAGCTACTCTGCAACTGTTTTTCACGCTGCAGTTGGACATCCAGTCTGACAAGATACGCACAGTCCAGGATGCGCTGGAGAGCTTGGTGGCCAGGGAGTCTGTCCAAGGTTACACCACCAAAACCAAGCAGGAGGTTGAGGTGAGCCGCAGAGTGACTCTGGAGAAGCTGCCCCCTGTCCTCGTGCTCCACCTGAAGCGCTTTGTCTATGAGAAGACAGGTGGATGCCAGAAGCTGGTCAAGAACATTGACTACCCTGTGGACTTGGAGATCAGCAGAGaactaCTTTCTCCAggcatcaaaaataaaaattttaaatgccagAGAACCTATAGGCTGTTTGCAGTGGTCTACCACCATGGCAACAGCGCTACAGGCGGCCACTACACTACGGACGTCTTCCAGATTGGGCTTAATGGCTGGCTACGAATCGATGACCAAACGGTCAAGGTTATTAACCAGTACCAGGTGGTGAAACCGCCTGCCGACCGCACAGCCTACCTCCTATATTACCGCCGCGTGGACCTGCTGTAACCGTGCCCGTGTGCCCGTGTGTGCCTGACGCTGCTTCCTACAGTTCCCAACTCACTCACTACCCACCTCTCTAGTGGCTCTGTAGAGAGACTCCCTCTGCGCCCGTGGGCTTGGATGGAAGGTGCCTGAGGGCCCGCACAGCGCAGCTCGTGCTGACTGACTTCAGAAGCTGGACTGTTGCCTGGGTGAGGGCACACGAGAGCCGCCGCTTCTGAAGAACCGCTGGTTCCCGGGCGGAGGAGGCGGCTCGCACCGTGTCCCAGTCTGATCGCGTAGTGGAATAAGTCCCGCACCAGCAGCTCTTGTAAATTTGTGAAAATGAATTTtatctttccttaaaaaaataatttttttaattcatcaCACTCTCCTCCTTTACCCTGTAGTTTTTGATAAATGACAAAAACGAGCCAGTCGTCATTAGAGATCGCTCTTActtcaaaaggaaataaatacaaaaaaaacttGTTGCTGGTTCCTAATAGGAAACACATTTTAACGATTACGAGAGGGAAACCGCTGACGTAGACACCGCGGGTCAGACATGTGGGTAGACGTCAGGCTGCAGAGGTGGGTGATTGTAACTTTATTACCCTGAAAAGATTTCAAATCACATTCATGCTGTGTACACATGAACAGTGGGCACAATGATGGACTGACAATTCCCAGTGTCTGCTGTGTAATCTCCCGCCACGCCTCTCTGATGCCGTGTCCCCCACGTACACAGTGTATTGATTCCTAGGAGTATAAAGTTGTCACCCATCAATAAAGATCACAAAGTTGGTTTAAA