Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Vars
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name valyl-tRNA synthetase
Also known as Bat6|D17H6S56E|G7a|Vars1|Vars2
Coordinate chr17:35219883-35235305
Strand +
Gene summary Predicted to enable valine-tRNA ligase activity. Predicted to be involved in valyl-tRNA aminoacylation. Predicted to act upstream of or within translation. Located in mitochondrion. Is expressed in several structures, including alimentary system; cranium; genitourinary system; midbrain; and telencephalon. Orthologous to human VARS1 (valyl-tRNA synthetase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Vars

Retroname Coord Strand Genomic Region ENSG
VarsP1 chrX:92571510-92573921 + Intragenic
ENSMUSG00000083207 UCSC

Expression

Transcript Sequences

>NM_011690.3
GGCGCCTGACCCAGACCCAGGCTCGTCCCGGCACGCGGGTTCCCGTCTCCGTGCTGCACGAGCCACTCTGGCCCCTGCTTGACCCGTCCGGCAGCGGTGGGCCGCGCACGGACCCTCGGGATCGCGCACGCACAGGCGGGGCCCGGCAGCCCTGCGAGGACCCGAGTCCGGAAACGTGCGCTGTCACAAAGGGGGGGACACGTGGGTGCCGCTGTCCCGGCCGCGTTCTCCCGCAGCGGGAGAGCTGCCTCCGCTGCCCGCCACCTCCACCCCGGCCGCCCTGTGGGGCCGCGGCCGTAGCCGGCCGAGTGTGATCGCCGCCTTCAGTCACTGCACCGCGTTCGGACCCTGCACAGCCATGTCCATCCTCTACGTCTCTCCTCACCCCGACGCCTTCCCCAGCCTCCGAGCCCTCATCGCTGCCCGATACGGGGAAGCTGGTGACGGTCCCGGGTGGGGAGGCCCTCACCCCCGCATCTGCTTGCAGCCTCCCCCGAGCAGCCGGACTCCATTCCCTCCGCCTCGCCTGCCCGCCCTGGAGCAGGGACCTGGCGGCCTGTGGGTGTGGGGGGCCCCGGCTGTAGCTCAGCTGTTGTGGCCTGCAGGCCTGGGGGGACCCGGGGGCAGCCGGGCAGCTGTCCTGGTCCAGCAGTGGGTCAGTTATGCTGACACGGAGCTCATACCCGCTGCCTGCGGGGCGACCCTGCCTGCCCTGGGACTTCGAGGTCCTGGTCAGGATCCCCAGGCTGCCCTTGGGGCCCTGGGCAAGGCCTTGAACCCCTTGGAGGACTGGCTGCGGCTGCACACCTACCTGGCTGGAGATGCCCCCACTCTGGCTGACTTAGCTGCTGTGACAGCCTTACTGCTGCCTTTCCGATACGTTCTGGACCCTTCTGCCCGCCGGATCTGGGGCAATGTGACTCGCTGGTTTAACACTTGTGTCCGGCAACCGGAATTCCGGGCTGTGCTGGGAGAAGTGGCCCTGTACTCGGGGGCCAGGTCTGTCACTCAACAGCCAGGCTCTGAGGTCATCGCACCCCAAAAAACACCCGCGCAGCtcaaaaaagaggcaaagaaacgggagaaactagagaaattccagcagaagcagaagacccAGCAGCAGCCCCCGCACGGAGAGaagaaaccaaaaccagagaagaaggagaaacgGGACCCTGGGGTCATTACCTATGACCTCCCTACCCCACCGGGGGAGAAGAAAGaTGTAAGTGGCGCCATGCCCGACTCCTACAGCCCTCAGTATGTGGAGGCTGCCTGGTATCCATGGTGGGAGCGGCAGGGCTTCTTCAAGCCAGAGTACGGGCGTCCTAGTGTGTCAGCACCAAATCCCCGGGGTGTCTTCATGATGTGCATCCCACCCCCCAACGTGACAGGCTCCCTGCACCTGGGCCACGCACTCACCAACGCCATCCAGGACTCCCTGACTCGATGGCACCGCATGCGTGGGGAGACCACCCTATGGAACCCAGGCTGTGACCATGCAGGCATTGCCACCCAGGTGGTGGTGGAAAAGAAGCTCTGGAAAGAGCGGGGTCTGAACCGGCACCAGCTGGGCCGCGAGGCCTTTCTTGAGGAGGTCTGGAAGTGGAAAGCCGAGAAGGGTGACAGGATttaccaccaattaaagaaactTGGCAGCTCCTTGGACTGGGATCGAGCCTGCTTCACCATGGATCCTAAATTGTCAGCAACTGTGACAGAGGCCTTTGTTAGGCTCCACGAAGAAGGGGTCATCTACCGTAGCACCCGCCTGGTCAACTGGTCCTGCACCCTCAACTCAGCCATTTCTGACATTGAGGTGGATAAGAAGGAGCTGACAGGCCGCACCCTGCTTCCTGTGCCTGGCTACAAGGAGAAGGTGGAGTTTGGGGTCCTTGTGTCCTTTGCCTACAAGGTCCAAGGCTCAGACAGCGacgaggaggtggtggtggcaaCAACCCGGATTGAGACCATGCTGGGAGACGTGGCTGTAGCTGTGCACCCCAAGGATCCCAGATACCAGCACTTAAAGGGAAAGTGTGTCGTCCACCCATTCTTGTCCCGGAGCCTTCCCATCGTCTTCGATGACTTTGTAGACATGGAGTTTGGCACAGGTGCCGTGAAGATCACCCCGGCACATGACCAAAATGACTATGAGGTTGGGCAGCGACACAGGCTCGAGGCCATTAGCATCATGGACTCAAAGGGGGCCCTCATCAATGTGCCTCCACCTTTCCTGGGCCTGCCCAGGTTTGAGGCCAGGAAGGCTGTGCTGGCGGCACTGAAGGAGCGGGGCCTGTTCCGTGGAGTCAAGGACAACCCCATGGTGGTGCCGCTTTGCAACCGCTCCAAGGATGTGGTGGAGCCTCTGTTAAGGCCACAATGGTACGTGCgctgtggggagatggctcaggctgCCAGTGCTGCTGTGACCCGGGGTGACCTCCGTATACTGCCTGAGGCCCATCAACGGACGTGGCATTCTTGGATGGACAACATCAGAGACTGGTGCATCTCTCGGCAGCTGTGGTGGGGCCACCGAATCCCTGCCTACTTTATCACCGTCCATGACCCGGCAGTACCCCCTGGGGAGGACCCTGATGGGCGGTACTGGGTAAGCGGACGCACTGAAGCAGAGGCCCGAGAGAAGGCAGCACGGGAGTTTGGAGTGTCCCCTGACAAGATCAGCCTTCAGCAAGATGAGGATGTGTTGGACACCTGGTTCTCCTCCggtctctttcccttctccatcTTTGGCTGGCCCAATCAGTCAGAAGACCTCAGTGTGTTCTACCCTGGGACCCTGTTGGAGACAGGCCATGATATCCTCTTCTTCTGGGTGGCCCGGATGGTCATGCTCGGCCTGAAGCTCACTGGGAAGCTGCCCTTCAGAGAGGTCTATCTCCATGCAATCGTGCGTGATGCTCATGGCAGGAAGATGAGCAAGTCTCTTGGCAATGTCATCGACCCCCTGGATGTCATCCATGGAGTTTCCTTGCAGGGCCTCTATGACCAACTACTGAACAGCAACCTGGATCCCAGTGAGGTGGAGAAAGCCAAAGAAGGACAGAAGGCCGACTTTCCAGCAGGGATTCCCGAGTGTGGCACTGATGCCCTACGCTTTGGACTCTGTGCCTACACATCCCAAGGTCGAGACATCAACCTGGATGTGAACAGGATCCTGGGGTACCGTCACTTCTGCAACAAACTCTGGAATGCTACCAAGTTTGCCCTGCGCGGCCTTGGGAAGGGCTTTGTGCCCTCAGCAACCTCCAAGCCTGAAGGGCACGAGAGCCTGGTGGACCGCTGGATCCGCAGCCGCCTAACTGAGGCCGTGAGGCTCAGCAATGAAGGCTTCCAGGCTTACGATTTCCCGGCCATCACCACCGCCCAGTACAGCTTTTGGCTCTATGAGCTCTGTGATGTCTATTTGGAGTGTCTAAAACCTGTGCTGAATGGAGTGGACCAGGTGGCGGCAGAGTGTGCTCGGCAGACCCTCTACACCTGCCTGGATGTTGGCCTGCGGCTGCTCTCGCCCTTCATGCCCTTTGTCACAGAggagctattccagagactgccccgGCGGACACCAAAAGCGCCTGCTAGCCTCTGTGTCACCCCGTACCCAGAGCCCTCAGAGTGCTCCTGGAAGGACCCTGAAGCTGAAGCTGCTCTTGAACTAGCTCTGAGCATCACTCGAGCTGTGCGCTCCCTGCGTGCTGACTACAACCTGACCCGCACCAGGCCCGACTGTTTCTTGGAAGTAGCCGATGAGGCCACAGGTGCCTTGGCCTCGGCAGTGTCGGGCTACGTGCAGGCTCTGGCCAGTGCGGGCGTGGTGGCTGTCCTCGCCCTGGGTGCTCCTGCACCGCAGGGCTGCGCTGTAGCTGTGGCTTCTGACCGCTGCTCCATCCACCTGCAGCTGCAGGGGCTAGTGGACCCAGCCCGGGAGTTGGGCAAGCTGCAGGCCAAGCGAAGTGAGGCACAGCGGCAGGCTCAGCGGCTGCAGGAGCGCCGTGCTGCCTCCAGCTACTCAGCAAAGGTGCCCCTTGAGGTCCAGGAGGCAGATGAAGCGAAGTTGCAACAGACAGAGGCGGAGCTCAGGAAGGTGGATGAGGCCATCGCCCTGTTCCAGAAGATGCTGTGACCCCCCATTCCAACCCTCAGCCCCCAGTGTTCCATCAACAGGGATGGcagcaataaaatattttcccaacATTC