Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Vbp1
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name von Hippel-Lindau binding protein 1
Also known as VBP-1
Coordinate chrX:74557903-74578552
Strand +
Gene summary Predicted to enable amyloid-beta binding activity; tubulin binding activity; and unfolded protein binding activity. Predicted to be involved in several processes, including negative regulation of amyloid fibril formation; protein folding; and tubulin complex assembly. Predicted to be located in cytosol and intracellular membrane-bounded organelle. Predicted to be part of polysome and prefoldin complex. Predicted to be active in cytoplasm. Is expressed in several structures, including genitourinary system; gut; heart; nervous system; and sensory organ. Orthologous to human VBP1 (VHL binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Vbp1

Retroname Coord Strand Genomic Region ENSG
Vbp1P1 chr3:10818121-10819474 - Intergenic
ENSMUSG00000104185 UCSC
Vbp1P2 chr11:31861970-31863453 - Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_011692.2
GATGCCTCAGAAGGTAGTTATTTGCTCTGGTGCTTTCTGAAGATGGCGGCGGCTAAGGACGGATGCGGCCTAGAAACTGCTGCTGGAAACGGGCGGCGGCTCCACTTAGGGATTCCTGAAGCAGTGTTTGTGGAAGATGTAGATTCTTTCATGAAGCAGCCTGGGAATGAGACTGCAGATACAGTGTTAAAGAAGCTGGATGAACAATACCAGAAGTATAAGTTTATGGAACTCAACCTTGCTCAGAAAAAAAGGAGGCTGAAAGGTCAGATTCCTGAAATTAAACAGACTTTGGAAATTCTGAAATACATGCAGAAGAAAAAAGAGTCTACCAATTCAATGGAGACGAGATTCTTACTGGCCGATAACCTGTACTGCAAAGCTTCAGTCCCTCCTACTGATAAAGTATGCCTATGGTTGGGGGCTAATGTAATGCTTGAATATGATATTGATGAAGCTCAGGCCTTGTTGGAAAAGAATTTATCAACTGCCACAAAGAATCTTGATTCTCTTGAAGAAGACCTTGACTTTCTTCGAGATCAGTTTACTACCACAGAAGTCAATATGGCCAGGGTTTATAATTGGGATGTAAAACGAAGAAACAAAGATGATTCTACCAAGAATAAAGCATAACACTGGCAATTGAAAATGTGATTCAGGTTTTCAAACATGTTAAATAAGCCAAGGTTTAAAGATTGATCTaattttcactgattttttttttcacagcaagattaaaatttaaaaacaccattttatttatttatgaaaacaaaattactttcaaatattttatgaaattaccagtatttttttcatatttcccTAAAATGTAatgctgcttttgttttattttatctgttaTAAGACAACTCCTAACTGAAATGGCCGAGAACTGTGAGGAATGCTATGGAAGCTGCTGAATACTGGGCAccagagcagttttctttttctttattggttgATATTACTCTCACTGGATATGGTAAACCTTTTAGAGGCAGGAAAGACATACAGTTCCAATATTTGTAAGCTTGTTCTCCTTTAGTACTTGAAGGGCATTATcatcttttgttgctgttttgttctgtaAATGGGGTTTCATGTATTTCTGCCTAACAAGTAGCTTTTATAATACTCTGAACTTTTCAGAAAATTGTTATTTGCTTTCCTACACAGTATGAGGGCTATTGACATCCATAACACTTTGATCCCAAGTAAGTATAGTGTGTCTACAATGACAATATAAGGGAGACTTGATCAATGCTAGAGAGTACTACCCATTCAAAACTGTAAGCTAAggtaatttttatattatgtaaCAGTTTTCCAAAGCACCTCGAACAGGAAGAGTAACATAAATATAAATCTGCATTATTTGAAAAGAGTTGTAAGCTTTTTTATTCATGATAAAATTTACATAGGACAGATATAATCTCTGGAAAGCCATTGGTACTGACTGTGGTAAAAGTACTTGGTGATACAGATTCTGGTAAAAACACATGCATGTTATTCCATCTCTGTGTAGTAAAAAGTATACTTGTACAATGTTTTGTACTTGTATTTCATGTTATTAAAATAGTGATGTTCAACCTGTTGCC