Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Vdac1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name voltage-dependent anion channel 1
Also known as Vdac5|mVDAC1|mVDAC5
Coordinate chr11:52251678-52280224
Strand +
Gene summary This gene encodes a voltage-dependent anion channel protein that is a major component of the outer mitochondrial membrane. The encoded protein facilitates the exchange of metabolites and ions across the outer mitochondrial membrane and may regulate mitochondrial functions. This protein also forms channels in the plasma membrane and may be involved in transmembrane electron transport. Multiple pseudogenes of this gene are found on chromosomes 1, 2, 3, 6, 8, 9, and X. [provided by RefSeq, Sep 2015]

Retrocopy(s) from Vdac1

Retroname Coord Strand Genomic Region ENSG
Vdac1P2 chr1:44683080-44684434 + Intragenic
ENSMUSG00000089877 UCSC
Vdac1P7 chr6:122543084-122544427 - Intergenic
ENSMUSG00000089931 UCSC
Vdac1P10 chr8:7051180-7052259 - Intergenic
ENSMUSG00000109463 UCSC
Vdac1P9 chr8:37621860-37623319 + Intergenic
ENSMUSG00000109932 UCSC
Vdac1P12 chrX:8823095-8823697 + Intergenic
ENSMUSG00000083871 UCSC
Vdac1P5 chr3:154229545-154229694 + Intragenic
N/A UCSC
Vdac1P1 chr1:31775137-31776836 + Intergenic
ENSMUSG00000082159 UCSC
Vdac1P3 chr2:20041328-20042744 - Intragenic
ENSMUSG00000082164 UCSC
Vdac1P4 chr2:88402341-88402991 + Intergenic
ENSMUSG00000081073 UCSC
Vdac1P6 chr5:137894322-137895147 - Intragenic
ENSMUSG00000083813 UCSC
Vdac1P8 chr7:116402796-116403746 - Intergenic
ENSMUSG00000108740 UCSC
Vdac1P11 chrX:149471471-149472679 + Intergenic
ENSMUSG00000081396 UCSC

Expression

Transcript Sequences

>NM_001362693.1
GACCCAGCTTCCTCCGCCGAGAGGACGAACTCCAGGCACGGCCATGCCCTGGATCCCCCAGCCCCTACACGCCCTAGCCGGCCCACGCCCGGAGTAGGTGGCGCCGGGTCCCTCCCGCGCATGCCAGTGTCTTCCCGGGCGGAACGGGCTGCCCTGAGTGGACTTAGGCCGCAGGAACAGGGACCTGGGCCTGGACTGAGAGCGAGACCCCATAGGGAGCCATACGCTTGGCCTCCTTGGCCTCGGGGACGGAGTCCGTGTTCTGTGTCGCCAAATGCAACTGTGCATTCTGGAAACTGTTTTCAGGGCCTGACATCAGATTGGAGGCCCGCAACTCTACACggtttgtccaaggtcacactgAACATGGCCGTGCCTCCCACATACGCCGATCTTGGCAAGTCCGCCAGGGATGTCTTCACCAAGGGCTACGGCTTTGGCTTAATAAAACTTGATTTGAAAACGAAGTCAGAGAATGGATTGGAATTTACCAGCTCAGGCTCTGCCAACACGGAAACCACCAAAGTGAACGGCAGCCTGGAAACCAAGTACAGATGGACTGAGTATGGGCTGACGTTTACAGAGAAGTGGAACACAGACAACACCCTGGGCACTGAGATCACTGTGGAAGACCAGCTTGCTCGTGGACTGAAGCTCACCTTTGATTCGTCATTCTCGCCGAACACTGGgaaaaaaaatgctaaaatcaAGACAGGGTACAAGAGGGAGCACATCAACCTCGGCTGTGACGTGGACTTTGACATCGCTGGGCCCTCGATCCGGGGCGCTCTGGTGCTTGGCTATgagggttggctggctggctaccAGATGAATTTTGAGACCTCGAAGTCCCGAGTGACCCAGAGCAACTTCGCAGTTGGCTATAAGACGGATGAATTCCAGCTTCATACtaatgtGAATGACGGGACAGAGTTTGGTGGCTCCATTTACCAGAAGGTGAACAAGAAGTTGGAGACTGCTGTCAATCTCGCCTGGACTGCAGGAAACAGTAACACTCGCTTCGGAATAGCAGCCAAGTATCAGGTCGACCCTGATGCCTGCTTTTCGgccaaAGTGAACAACTCTAGCCTGATTGGCTTAGGGTACACTCAGACCCTAAAACCAGGTATCAAACTGACGTTGTCAGCCCTGCTCGATGGCAAGAACGTCAATGCGGGTGGCCACAAGCTTGGCCTAGGACTGGAATTTCAAGCATAAATGAATATTGTACAATCGtttaattttaaactattttgcaGCATAGCTACCTTCAGAATTTAGTGTACCTTTTAATGTTGTATGTTGGGGATGCGAGAGTTGATAAATACCACGTTAGACCTCCAGGCTAAGGATGACTCGGCTTTAAGGTGTTTACCATTTCAGAGGTACAGCAGAAACCCCATTCCAGAAAGGGTCCTTTTTAGCTGTAGGCGTGGGTTGGGGAGGAGCCCCTGTAGAGATGCCAGGCTACAAGTGGAAAGCTGGGAACATGTGGGTCCTTTGTAAATCTGTATCCAGTCCCCAGATGAAATTGTGACTTCCCGAGCATCGAACCCTGGTGTCCAGATCCTATCTGCTCGGAAGCATGTACACACCTGCGTGAAAGGGATGTTTTTAGACTGATCCTCACACCCTGTTCCCATCGTGCCCTGTTCCCATCCTAGCCCATCACTTAACCTGTTTTACACCAAAAGTAGTCTTTAGGGTGTGGTTAGCTATTTCTTTTGTGCCATTTTAGGGTGGAGAGGGTGGGCGTGATGGAGCCAGTCATTCAGGACTTAAttcttccttgtgttgtggtgtggttttctttcttcttcttcttttttttttttaattccttctttCGCCATTGCACCAGAGTATGAAATAGCTTCCGGGTTCTCCGGCTCTGAGCTGGGCGGTGATTGTGGTCACACCCTGACAACACTAGGGATCTCAACTGACTCCTCTTGTAGCCTCACCACTATTTTTTAGCAGTTTAATGGGTACATTATAGAGTCTTCCATTTTGTGTGGAATTAGCTCCTCCCCTTCAAATGCTGTAATTAACATCacttaaaataaaacttgaatAAAATACTGAAACCTCA
>NM_011694.6
CACGCCTCCCTATCGCCCCGTGCCAGAGTGCACGCAGGCCTTTACGCGCGGCCACACATGATCACAGAGCCGCAGAGGGCGAGAGCGCGGCTCGCGAGTGGGAAGAAGACCCCGAGACTGGTCTGGGCGCTGTCCGGGGTGGAGCCGAGGGCGGAGCTTCGGGGTCCGGCGCGCAGAGCTGGGGCGTGTCCGCGCCGCCGCGATCTGCGCCGCTCCGCCCTCGGCCCGTTCGCTGCGCTCCCAGCCTCCTCGCCGCAACCCCCGCCGTAGCTGCCGCTGCTCCCGCCGTCACCGCCTCCGAGAACATGGCCGTGCCTCCCACATACGCCGATCTTGGCAAGTCCGCCAGGGATGTCTTCACCAAGGGCTACGGCTTTGGCTTAATAAAACTTGATTTGAAAACGAAGTCAGAGAATGGATTGGAATTTACCAGCTCAGGCTCTGCCAACACGGAAACCACCAAAGTGAACGGCAGCCTGGAAACCAAGTACAGATGGACTGAGTATGGGCTGACGTTTACAGAGAAGTGGAACACAGACAACACCCTGGGCACTGAGATCACTGTGGAAGACCAGCTTGCTCGTGGACTGAAGCTCACCTTTGATTCGTCATTCTCGCCGAACACTGGgaaaaaaaatgctaaaatcaAGACAGGGTACAAGAGGGAGCACATCAACCTCGGCTGTGACGTGGACTTTGACATCGCTGGGCCCTCGATCCGGGGCGCTCTGGTGCTTGGCTATgagggttggctggctggctaccAGATGAATTTTGAGACCTCGAAGTCCCGAGTGACCCAGAGCAACTTCGCAGTTGGCTATAAGACGGATGAATTCCAGCTTCATACtaatgtGAATGACGGGACAGAGTTTGGTGGCTCCATTTACCAGAAGGTGAACAAGAAGTTGGAGACTGCTGTCAATCTCGCCTGGACTGCAGGAAACAGTAACACTCGCTTCGGAATAGCAGCCAAGTATCAGGTCGACCCTGATGCCTGCTTTTCGgccaaAGTGAACAACTCTAGCCTGATTGGCTTAGGGTACACTCAGACCCTAAAACCAGGTATCAAACTGACGTTGTCAGCCCTGCTCGATGGCAAGAACGTCAATGCGGGTGGCCACAAGCTTGGCCTAGGACTGGAATTTCAAGCATAAATGAATATTGTACAATCGtttaattttaaactattttgcaGCATAGCTACCTTCAGAATTTAGTGTACCTTTTAATGTTGTATGTTGGGGATGCGAGAGTTGATAAATACCACGTTAGACCTCCAGGCTAAGGATGACTCGGCTTTAAGGTGTTTACCATTTCAGAGGTACAGCAGAAACCCCATTCCAGAAAGGGTCCTTTTTAGCTGTAGGCGTGGGTTGGGGAGGAGCCCCTGTAGAGATGCCAGGCTACAAGTGGAAAGCTGGGAACATGTGGGTCCTTTGTAAATCTGTATCCAGTCCCCAGATGAAATTGTGACTTCCCGAGCATCGAACCCTGGTGTCCAGATCCTATCTGCTCGGAAGCATGTACACACCTGCGTGAAAGGGATGTTTTTAGACTGATCCTCACACCCTGTTCCCATCGTGCCCTGTTCCCATCCTAGCCCATCACTTAACCTGTTTTACACCAAAAGTAGTCTTTAGGGTGTGGTTAGCTATTTCTTTTGTGCCATTTTAGGGTGGAGAGGGTGGGCGTGATGGAGCCAGTCATTCAGGACTTAAttcttccttgtgttgtggtgtggttttctttcttcttcttcttttttttttttaattccttctttCGCCATTGCACCAGAGTATGAAATAGCTTCCGGGTTCTCCGGCTCTGAGCTGGGCGGTGATTGTGGTCACACCCTGACAACACTAGGGATCTCAACTGACTCCTCTTGTAGCCTCACCACTATTTTTTAGCAGTTTAATGGGTACATTATAGAGTCTTCCATTTTGTGTGGAATTAGCTCCTCCCCTTCAAATGCTGTAATTAACATCacttaaaataaaacttgaatAAAATACTGAAACCTCA