Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Vps45
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name vacuolar protein sorting 45
Also known as mVps45
Coordinate chr3:95907144-95969715
Strand -
Gene summary Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to act upstream of or within protein transport. Located in Golgi membrane and endosome membrane. Human ortholog(s) of this gene implicated in severe congenital neutropenia 5. Orthologous to human VPS45 (vacuolar protein sorting 45 homolog). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Vps45

Retroname Coord Strand Genomic Region ENSG
Vps45P1 chr2:51434986-51436685 + Intergenic
 ENSMUSG00000084334 UCSC

Expression

Transcript Sequences

>NM_013841.3
CGCAGTCCCAGCGGTCCTGAGTAGGGGGCGGGTGGAAGCTCCGCGCCTTCCTGGGGTCTCTAAGGTCTACAACATCTCTAAATAGCGTTCCCATTGTTTCTTCATTCAACAAACGTGATGAATTTcagctccccttctctctttagGAAACCCAGTTGAGTCTCATTCTATGACCTACCAAATACAAAATGCCGTCTCTTGATGCTACTTTGTTTGGATACTTTAGAAAACCGGGGCTGCCTCTGTAACCTAGCCTGGGCTATCAGAGAACTTGCTATGCAGTACAGACCTGGGACCCCGCTGCCCCAGCCTGCCCAGTGCTACGATGACGTGCGAGGGCTTCAGAAAAGATGCTCAGCAAACAGTGTCCGAGAGAGCTGTATCCCGCGGTGCGCCAAGCGCTTCCCTACTCAGGACCAGAAGCCAGCACAGCGCGGGTTCGGGGAAACAGGCTGCCTTCCACTCCCTACCGAGAAGCGTCGGGAATGGCACCGTCGCTTAGCTGCTGAGTCTGAGTCCCGGACTCCACGGAGGAACTACAATTCCCAGTATCGGAGCTACCCGGACTCCCGGAAGCCGAGGCTTTGGCGACCGGAAGCAGCTGAGACCCAACAGGCCTGAGGTTAATTCAGCCAGGAAAGTGGGTGGGAAGGGCTGTGGGGCACCTGTCAATTCGCCACCATGAATGTGGTCTTTGCTGTGAAGCAGTATATTTCCAAAATGATAGAGGACAGCGGGCCGGGCATGAAGGTACTTCTCATGGATAAAGAAACGACTGGTATAGTGAGTATGGTCTACACACAGTCAGAGATTCTTCAGAAGGAAGTATACCTCTTCGAACGAATTGATTCTCAAAATCGAGAGATCATGAAACACCTAAAAGCAATTTGTTTCCTTCGACCCACAAAGGAGAATGTGGAATATCTGATCCAGGAGCTCCGAAGACCCAAGTACagcatatattttatttATTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTCACTGGCTGAAGCTGACGAGCAGGAAGTTGTGGCTGAAGTTCAGGAATTTTATGGTGATTACATTGCGGTGAATCCACATTTGTTTTCTCTCAATATTTTGGGTTGCTGTCAGGGTCGAAATTGGGATCCAGCCCAGCTATCAAGAACGACTCAAGGGCTGACAGCTCTCCTTTTGTCTCTGAAGAAGTGCCCCATGATTCGTTATCAGCTTTCATCAGAGGCTGCAAAGAGACTGGGAGAATGTGTTAAGCAAGTGATAAGTAAAGAGTACGAACTCTTTGAATTCCGGCGGACAGAGGTTCCTCCGCTACTTCTCATTCTGGATCGCTGCGATGACGCCATTACCCCGCTGCTCAACCAGtGGACATATCAGGCCATGGTCCATGAACTACTGGGCATAAACAACAACCGGATTGATCTTTCCAGAGTGCCAGGAATCAGCAAAGACTTAAGAGAGGTGGTCCTGTCCGCTGAAAATGATGAATTCTATGCTAATAACATGTACCTGAACTTTGCCGAGATTGGTAGCAATATAAAGAATCTCATGGAAGACTTCCAGAAGAAGAGACCAAAAGAGCAGCAAAAGCTGGAATCCATAGCAGACATGAAGGCCTTTGTTGAAAATTATCCACAGTTCAAAAAGATGTCTGGGACTGTCTCAAAGCACGTGACAGTGGTCGGGGAACTGTCTCGGTTGGTCAGTGAGCGGAATCTGCTGGAGGTTTCAGAAGTTGAGCAAGAACTGGCCTGTCAGAATGACCATTCTAGTGCTCTTCAGAATGTGAAGAGACTCCTGCAGAATCCGAAAGTCACAGAATTTGATGCAGTTCGCCTGGTGATGCTTTATGCTCTACATTACGAGCGCCACAGCAGCAACAGCCTGCCAGGACTCATAGTGGACCTCAGGAGTAAAGGTGTTGCTGAGAAGTATCGGAAGcttGTGTCGGCAGTTGTTGAATATGGTGGTAAACGGGTTAGAGGAAGTGACCTCTTCAGTCCCAAAGATGCTGTGGCTATTACCAAGCAGTTTCTCAAAGGACTGAAGGGAGTGGAAAATGTGTATACACAGCACCAGCCTTTCCTGCATGAGACCCTGGATCATCTCATCAAAGGAAGGCTTAAGGAAAACCTCTATCCTTATTTAGGCCCCAGCACACTCAGAGACAGGCCTCAGGATATCATCGTGTTTATTATTGGAGGAGCCACCTATGAAGAGGCTCTGACAGTCTATAACCTGAACCGCACCACTCCTGGAGTGAGGATCGTtctgggaggaacaacaatacacAACACAAAAAGCTTCCTAGAGGAAGTCCTGGCTTCTGGGCTGCACAGCCGCAGCAGGGAGAGCTCGCAGGCCACCTCAAGGTCAGCAAACAGAAGATGAGATGGCAGTGGAGAGCGGCGAGAATGTCATGGCCTCCTCTTACCTGCCTCGGCCCTTCCCTGCTGACCAGGGGCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGACGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTGTATTTGACAGCA