Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Xlr
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name X-linked lymphocyte-regulated
Also known as -
Coordinate chrX:52779085-52799683
Strand -
Gene summary Predicted to be involved in meiotic cell cycle and spermatogenesis, exchange of chromosomal proteins. Predicted to be located in lateral element. Predicted to be active in synaptonemal complex. Is expressed in germ cell of testis; gonad; and testis. Human ortholog(s) of this gene implicated in spermatogenic failure 4. Orthologous to human SYCP3 (synaptonemal complex protein 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Xlr

Retroname Coord Strand Genomic Region ENSG
XlrP1 chr4:123329350-123330072 + Intragenic
Intragenic
ENSMUSG00000081528 UCSC

Expression

Transcript Sequences

>NM_011725.4
agtatgctttgtggtggccacgaAGCCGAGTTCTTGAGGAAGCGAAGTTCTTGAGGAAGCCGAGAAGTTCTTGAGAAAACCTAAATTTCTTAGTGGAAAGGCAGTGTTTTGAATATTCTCTAGAGACAACAATGGAAAACTGGGACTTGTCAAGTGATGAAATGCAAGATGGGAATGCTCCAGAATTGGACGTTATTGAAGAACATAATCCAGTAACTCGTGATGATGAGAAtgcaaatcctgaagaagtagttggagatacacgatctccagtacaaaatattctgggaaaatttgaaggtGACATTAACAAGaggcttcacataaagagaaaacgcatggaaacttatatcaaagattctttcaaaGACAGCAACGTGAAATTAGAACAACTTTGGAAAACGAACAAAcaagagagaaagaagattaacaacaaattttgtgagcagtatataactacatttcagaagtttgatatggatgtccagaaattcaatgaagaacaagaaaaatcagtgaacaattatcaaaaagaacaacaagcattaaaactgtccaaatgtagtcagagccagaccctggaagcaattAAAGACATGCATGAAAACTACATGGAGggtCTGATGAACTTGGAGACCAACAACTACAATATGctttttgatgtagatggtgaactgagaaaagaaaTGTCAGTGTTTAAAAAAGACCTCATGAAGCatactctgaagtactcttctagtttcccatcttcagactaaGGAAGCATGCATATTTTGCACTTGCTGGTACAtttgtaaccaaataaaaaattCGCTAACttttttgtctcctatgaaacagagtttgaaaggctctttaatccttgttattctgatgattctaagaaggaagttaaCCCCCAGTGAAGttattacaaagttaactaggaggtatacctttagagtcaaaatagaactcctttatttttaaacatctttaatcattttcttatttaagtGTAAGAGCCtgtttatattaacttccaaataaaatgttaataaatatgTGAGTGGCAAA