Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Tgif2
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name TGFB-induced factor homeobox 2
Also known as 4921501K24|5730599O09Rik
Coordinate chr2:156681737-156697490
Strand +
Gene summary Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within several processes, including nodal signaling pathway; positive regulation of neuron differentiation; and regulation of gastrulation. Predicted to be located in centrosome and nucleoplasm. Is expressed in several structures, including alimentary system; brain; forelimb phalanx; genitourinary system; and sensory organ. Orthologous to several human genes including TGIF2-RAB5IF (TGIF2-RAB5IF readthrough). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tgif2

Retroname Coord Strand Genomic Region ENSG
Tgif2P1 chr4:89134947-89136720 + Intergenic
ENSMUSG00000107513 UCSC
Tgif2P2 chr17:40426108-40428947 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_173396.3
CCACGCTCTGCACAAAGTTTGTTTCTGCCTCGGGGCGGTGGGGGAGGGTGCGGCAGGCgggatgggaggagaggggatCTGACGTCAGGTCGCGAGGTGCTTTCCAGCCGCGAGCTGTCAGGCGGGTGTCAGACCCGGCAGGTACGCGGCGCGTTCCCCCGGTGCCCCCCGCCCCGGCCGGGTGGTCCCACACCCCACCGAGGCCGCGTGGGCCGGAAAGCCGCCAGGGAAGGCTCCCCAGAGGTCCAGCTTAGCCCCTAAGCATCATGTCGGACAGCGATCTAGGCGAGGATGAGGGGCTCCTGTCACTGACCGGCAAGAGGAAGCGCAGAGGGAACCTGCCCAAGGAGTCAGTAAAGATCCTCCGGGACTGGCTCTATCTGCACCGCTACAACGCCTACCCCTCAGAGCAGGAGAAGCTAAGTCTCTCTGGACAGACCAACCTCTCGGTGCTGCAGATATGTAACTGGTTCATCAATGCCCGTCGTCGCCTTCTCCCTGACATGCTTCGGAAGGATGGCAAAGACCCTAATCAGTTCACCATCTCCCGTCGTGGGGGTAAGGCCTCTGATGTGGCTCTCCCCAGGGGCAGCAGCCCCTCTCTGCTGGCTGTGTCTGTTCCAGCCCCCACTAACATGCTCTCCTTGTCTGTGTGCTCCATGCCACTCCACTCAGGCCAAGGTGAAAAGCCAGCAGCACCCTTCCCACAAGTGGAGCTGGAATCCCCCAAGGCCCTGGTGACCCCTGCTAGCACACTCACCCTGCTGACTAGGGCAGAGGCTGGAAGCCCCACGGGTGGACTCTTCAATACGCCACCACCCACACCCCCAGAGCAGGACAAGGATGACTTCAGCAGCTTCCAGTTGCTGGTGGAGGTGGCGCTGCAGAGGGCTGCCGAGATGGAGCTTCAGAAGCAGCAAGAGCCAGCGCCACCTTTGCTACACACTCCGCTGCCTTTCGTCTCAGAAAACGCCAAGTAGGCACCTGCTCCCGGGTGGCTTGAGGTTCCTGGCTCACTGCCCTTTCATGCAGAGGGTTATCCAAGTACGGATCACTGCCAAGCATCAGGACCATTCTGTCCAGTCCTCAGCGGATGTCGCTGCGCTGCACTGTTACGGGGCCTGTACTCTGCTGAGTGCCATTCCTTCAAGCGTCCTCTCCGAGGAGACCAAGGcaccagagccaggcatggtgttgctgctgctcctccagagagcCCTGGGACACCTGCACTCCAGCCTGCTTTCCTAGGCAGGCTCAGGAAAGCTGCCAAGTCCAGACTTGAGCTGGGTCCAAGCCGCCCCTAAGCTGTGCCTCTTTTGGTCGAGCCAGGTGTGCACATTCCAACCTATTCAAAGGACAAAGGAAATGCCCAGCAGATGTCACAGAACCGACTCCAGTTGAATGTTTAGATTTttgctaaattgttttattttccttttgctgtGGTTTGTGTTAATGCAGTAGGTAGCCCAGAAGcacaggtgtggggagagagcaCCTTACACGGTGGGTGGAGCTCGGTAAGTGGGTAATCTACTTCCCACAGGATGGTTGTATAGGGACCAGCAGATTCTCTGCAGTGGTGCTGAGTTCAGACTAGAGTGGTTGTTTAATTCTTGGTTTGGTCTTCCCTATtataaaagacagaaggaaaatatCCACAGGTGGTGGGTTATTTGCACCAGACGGTCATTTAGACACAGCAGAGACAGATGACAAAACCAGAGGCACACGTGTTTCTATTGTCGTGGTTAAGCTAGAGTGAAAcagctctgtttttctctctgttctgagtaactcccctcaccccaccccagcgACCCCCACCCTGCACCACCTTTGTAGCTTGTTTCGGATTTATTCTGGAGCTTGGCAAGAATGTCGTGTGCCAGCATCTACTTGGGAGGAGTGAGCCATCTGCTGGTCATTAGGCCCTTCGGAAAGCTGCTTGTTCACAGAGGCAGCTGGAACCTTCCTGGAGGAGAGGCTGCTGAGGCTACCGACTGGCCCACCTCCCTTCAGGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGGGGAAACAGACCACACTTGGTCTTAATCTCTCCCCTTTTCCCGTTTACTTTGCTTAGTTTTCAGCAACAGTATACCCCATCTTTATATCCTAAGAAACACTAATCCTAGATTTGTATTAACCAAAATACTTGTGTTCTGAATAACCAGAAGATGTGAGGAGCCCTGACTGTGGTCTGAGGTTCACCCGGGTGTGAGCACAGACGGGGCTCTTGGATGTTGACTGGCTTGGAGTGCCTGTTCCGAGGAAGGCAGAGACCACTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTCTCCTGAGTGACTTCACCCATCCCTTGCTGTGCAAGTGGGCGCGAGAATGGCTATTTGTAAGGGGCTGCTTCCCTGGGCTCTGCCTCATGCCTCCCTCTGGCTTCCTGTCCTGTAGGAGACCCAGCAGGCTCAACTCTCTGTCACCCTGAGGCACTGCTGGGAAGGGAACATGGCTTCATTGACTTTGTGGTTTGCCCACTGCTACCCCACCTGTCTGTGAGACCCCATGATGGCTGTAGGATGCTAAGGCGGGGGTGATACTAGGATGAGGGATTTCTTTTCCCCCCACAGTGCACTGagcaagggaggagggagggagccatGCTGCTGACATATTCTGGCATTCCCCCTCCTGGGATAAAACAGGGCATCAGAAAGGTAGAGCGGTCTCTGCTTAGGTTGCCTGTAAGATAAATGTGGAGAAGCACGGTTGTCCCATTGAACAATATTTGAGCAAAAAACTACTGTAAATAactggtttttgtcttttgtcaaataaaattgttttggttttgtttatgttttaaagtcaaa