Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pabpc4
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name poly(A) binding protein, cytoplasmic 4
Also known as -
Coordinate chr4:123172722-123192718
Strand +
Gene summary Enables mRNA binding activity. Acts upstream of or within myeloid cell development and regulation of mRNA stability. Predicted to be located in cytoplasm. Predicted to be part of ribonucleoprotein complex. Predicted to be active in cytoplasmic stress granule; cytosol; and nucleus. Is expressed in central nervous system; sensory organ; and tooth. Orthologous to human PABPC4 (poly(A) binding protein cytoplasmic 4). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pabpc4

Retroname Coord Strand Genomic Region ENSG
Pabpc4P4 chr16:15036755-15039728 + Intergenic
 ENSMUSG00000116213 UCSC
Pabpc4P6 chr18:32164146-32164815 + Intragenic
 ENSMUSG00000085300 UCSC
Pabpc4P1 chr9:96154960-96155243 - Intragenic
 N/A UCSC
Pabpc4P2 chr15:59261663-59262002 - Intragenic
 N/A UCSC
Pabpc4P3 chr15:90586569-90587088 + Intergenic
 ENSMUSG00000116404 UCSC
Pabpc4P5 chr17:32169527-32170278 + Intragenic
 ENSMUSG00000091548 UCSC

Expression

Transcript Sequences

>NM_001356377.1
gaaaagaagaggaaaaaaaaaagcaaaagggaaaaaaagaagaaaaagaaccagaCAGCGACTTGTGCTGGGAGCCCGTGGGGAAGTGACTTTCACAGCTTCCGGCCTGCCTGTCCGTCAgcgtctgtctgtccgtccggtGGTGAGCCATCCCCCTCGGCCCGGCCCGCCCCTGCACGCCTCTGCGCCGCGTGGCAGCCCCGCGCCCCGGCTGGCCGCACCACGTGTCCGCACTGCCCTTCGCCGGCACCCGCAAAGATTTGGTTTCCCCCTTCCTGGGCTGCTGTAACTGTAAACCGCCGGGAGTCCGGGGCCTATATTTATCACGAAACGCGTGTTCCCAAGGCGGCCGTGAGCGCAGCATCTGATtgcctcttgaaaattttttGCCCCCTTTACGAGGGGATTtcctactttaatttttattttttaagcctcAAGCCAGGACAGCTGGAGAGTACAAACTCCAGGAGCGGGCCATATTGTTTTTGAGAGCCTTTTGTCTTGGGGCTTTTGCAGTCCCGTGCAAGTCGTCCCGCACACGGGTCCCGGCTCGGAGCCTCCCTGCTCCAGCCTTCTCCGGCGTCGCTGGTGCCACCTGTGCGCTGCGGCGCGTGCCATAGCTCCTCGGAGCCCCTTTTGTCCTGCAGTAGGCCTTGTTAGAAGTCCTCCTGGCGGGGCTCGGGGtcgtggggggtggggagatgaaCGCTGCAGCCAGCAGCTACCCCATGGCCTCCTTATACGTGGGCGATTTGCACTCGGACGTCACCGAAGCCATGCTGTATGAAAAGTTTAGCCCTGCGGGGCCTGTGCTGTCCATCCGGGTCTGTCGCGATATGATCACCCGGCGCTCTCTGGGTTATGCCTACGTCAACTTCCAGCAGCCAGCTGACGCTGAGAGGGCCTTGGACACCATGAACTTCGACGTGATGAAGGGAAAGCCGATCCGCATCATGTGGTCGCAGAGGGATCCCTCGTTGAGAAAATCTGGGGTGGGAAATGTCTTCATCAAGAACCTGGACAAATCCATAGACAACAAGGCACTGTATGacactttctctgcctttggAAACATCTTGTCCTGTAAGGTGGTCTGTGATGAGAACGGCTCTAAGGGCTATGCTTTTGTTCACTTCGAGACCCAAGAGGCCGCCGACAAGGCCATCGAGAAGATGAATGGCATGCTTCTCAATGACCGTAAAGTGTTCGTGGGTAGATTCAAGTCTCGCAAAGAGCGGGAAGCGGAGCTTGGAGCCAAGGCCAAGGAATTCACCAATGTTTATATCAAAAACTTTGGAGAAGAGGTGGATGATGGGAATCTGAAAGAGCTCTTCAGCCAGTTTGGTAAGACCCTAAGTGTCAAGGTGATGAGAGACTCCAGTGGGAAGTCCAAAGGCTTTGGCTTTGTAAGTTACGAGAAACACGAGGATGCCAATAAGGCTGTGGAAGAAATGAATGGAAAGGAAATGAGCGGGAAAGCCATATTTGTAGGCCGTGCACAGAAAAAGGTAGAAAGGCAGGCTGAGCTGAAGCGGAAGTTTGAGCAGCTCAAGCAGGAGAGGATTAGCCGGTACCAGGGGGTGAATCTCTACATTAAGAACTTGGATGACACCATTGATGATGAGAAATTGAGGAGagagttttctccctttggaTCAATCACCAGCGCGAAGGTGATGCTAGAAGATGGGAGAAGCAAAGGGTTTGGCTTTGTCTGTTTCTCCTCTCCTGAAGAGGCGACCAAAGCTGTCACCGAGATGAATGGACGCATTGTGGGCTCCAAGCCTCTGTACGTCGCCCTGGCCCAGAGGAAGGAAGAGCGGAAGGCTCATCTGACCAACCAGTACATGCAGCGTGTGGCGGGGATGAGAGCACTCCCTGCCAGTGCCATCTTAAATCAGTTCCAGCCTGCAGCTGGTGGCTATTTTGTGCCTGCAGTTCCGCAGGCTCAGGGAAGACCCCCATATTACACGCCTaaccagttagcacagatgaGGCCTAATCCACGCTGGCAGCAAGGCGGGAGACCTCAAGGCTTCCAAGGAATGCCAAGTGCCCTGCGGCAGTCTGGGCCTCGTCCAGCTCTTCGACATCTGGCTCCAACTGGTAATGCTCCGGCCTCTCGTGGCCTTCCTACTACTGCTCAGAGAGTCGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCTGTGGCTCCATACAAGTACGCCTCCAGTGTCCGCAGCCCACACCCTGCCATCCAGCCGCTGCAGGCCCCCCAGCCTGCAGTCCACGTCCAGGGTCAGGAGCCCCTGACTGCCTCCATGCTTGCTGCAGCGCCCCCCCAGGAGCAGAAGCAGATGCTGGGGGAGCGTCTGTTCCCGCTTATCCAAACAATGCATTCAAACCTGGCTGGGAAAATCACCGGGATGCTGCTGGAAATCGACAACTCTGAGCTGCTGCACATGCTGGAGTCCCCCGAGTCCCTCCGCTCCAAGGTAGATGAAGCGGTGGCAGTCCTGCAGGCTCACCATGCCAAGAAAGAAGCTGCCCAGAAGGAGTCGAAAGCCAAATAACCCCTCATGGCATCCAGCTAAGGTCTGAAGACATCCTAGTTTGTCTGTGGACCTCCACACCAAGAACCAAGTTGCAAATTCAATAGGTCATTTTGTATCAGAAGGTCAATTATGAAGCACCTATAAGTTTTTCaattataagaatatattctctGGGTTCTGTTGTGACCCAgatgataacttttttttttctattatgggttctggttttttttttccctcatcccAGAAATTGGTTTTGATGTACCCAAGACTTAAGTTTctcaaataaaggaaataaaatctccATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAGAACTGTTGGGCTctgcatatattaaataaatttactttcccttttggttttt
>NM_130881.3
gaaaagaagaggaaaaaaaaaagcaaaagggaaaaaaagaagaaaaagaaccagaCAGCGACTTGTGCTGGGAGCCCGTGGGGAAGTGACTTTCACAGCTTCCGGCCTGCCTGTCCGTCAgcgtctgtctgtccgtccggtGGTGAGCCATCCCCCTCGGCCCGGCCCGCCCCTGCACGCCTCTGCGCCGCGTGGCAGCCCCGCGCCCCGGCTGGCCGCACCACGTGTCCGCACTGCCCTTCGCCGGCACCCGCAAAGATTTGGTTTCCCCCTTCCTGGGCTGCTGTAACTGTAAACCGCCGGGAGTCCGGGGCCTATATTTATCACGAAACGCGTGTTCCCAAGGCGGCCGTGAGCGCAGCATCTGATtgcctcttgaaaattttttGCCCCCTTTACGAGGGGATTtcctactttaatttttattttttaagcctcAAGCCAGGACAGCTGGAGAGTACAAACTCCAGGAGCGGGCCATATTGTTTTTGAGAGCCTTTTGTCTTGGGGCTTTTGCAGTCCCGTGCAAGTCGTCCCGCACACGGGTCCCGGCTCGGAGCCTCCCTGCTCCAGCCTTCTCCGGCGTCGCTGGTGCCACCTGTGCGCTGCGGCGCGTGCCATAGCTCCTCGGAGCCCCTTTTGTCCTGCAGTAGGCCTTGTTAGAAGTCCTCCTGGCGGGGCTCGGGGtcgtggggggtggggagatgaaCGCTGCAGCCAGCAGCTACCCCATGGCCTCCTTATACGTGGGCGATTTGCACTCGGACGTCACCGAAGCCATGCTGTATGAAAAGTTTAGCCCTGCGGGGCCTGTGCTGTCCATCCGGGTCTGTCGCGATATGATCACCCGGCGCTCTCTGGGTTATGCCTACGTCAACTTCCAGCAGCCAGCTGACGCTGAGAGGGCCTTGGACACCATGAACTTCGACGTGATGAAGGGAAAGCCGATCCGCATCATGTGGTCGCAGAGGGATCCCTCGTTGAGAAAATCTGGGGTGGGAAATGTCTTCATCAAGAACCTGGACAAATCCATAGACAACAAGGCACTGTATGacactttctctgcctttggAAACATCTTGTCCTGTAAGGTGGTCTGTGATGAGAACGGCTCTAAGGGCTATGCTTTTGTTCACTTCGAGACCCAAGAGGCCGCCGACAAGGCCATCGAGAAGATGAATGGCATGCTTCTCAATGACCGTAAAGTGTTCGTGGGTAGATTCAAGTCTCGCAAAGAGCGGGAAGCGGAGCTTGGAGCCAAGGCCAAGGAATTCACCAATGTTTATATCAAAAACTTTGGAGAAGAGGTGGATGATGGGAATCTGAAAGAGCTCTTCAGCCAGTTTGGTAAGACCCTAAGTGTCAAGGTGATGAGAGACTCCAGTGGGAAGTCCAAAGGCTTTGGCTTTGTAAGTTACGAGAAACACGAGGATGCCAATAAGGCTGTGGAAGAAATGAATGGAAAGGAAATGAGCGGGAAAGCCATATTTGTAGGCCGTGCACAGAAAAAGGTAGAAAGGCAGGCTGAGCTGAAGCGGAAGTTTGAGCAGCTCAAGCAGGAGAGGATTAGCCGGTACCAGGGGGTGAATCTCTACATTAAGAACTTGGATGACACCATTGATGATGAGAAATTGAGGAGagagttttctccctttggaTCAATCACCAGCGCGAAGGTGATGCTAGAAGATGGGAGAAGCAAAGGGTTTGGCTTTGTCTGTTTCTCCTCTCCTGAAGAGGCGACCAAAGCTGTCACCGAGATGAATGGACGCATTGTGGGCTCCAAGCCTCTGTACGTCGCCCTGGCCCAGAGGAAGGAAGAGCGGAAGGCTCATCTGACCAACCAGTACATGCAGCGTGTGGCGGGGATGAGAGCACTCCCTGCCAGTGCCATCTTAAATCAGTTCCAGCCTGCAGCTGGTGGCTATTTTGTGCCTGCAGTTCCGCAGGCTCAGGGAAGACCCCCATATTACACGCCTaaccagttagcacagatgaGGCCTAATCCACGCTGGCAGCAAGGCGGGAGACCTCAAGGCTTCCAAGGAATGCCAAGTGCCCTGCGGCAGTCTGGGCCTCGTCCAGCTCTTCGACATCTGGCTCCAACTGGTAATGCTCCGGCCTCTCGTGGCCTTCCTACTACTGCTCAGAGAGTCGGGTCTGAGTGCCCGGACCGCTTGGCTATGGACTTTGGTGGGGCTGGTGCCGCCCAGCAAGGGCTGACTGACAGCTGCCAGTCTGGAGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCTGTGGCTCCATACAAGTACGCCTCCAGTGTCCGCAGCCCACACCCTGCCATCCAGCCGCTGCAGGCCCCCCAGCCTGCAGTCCACGTCCAGGGTCAGGAGCCCCTGACTGCCTCCATGCTTGCTGCAGCGCCCCCCCAGGAGCAGAAGCAGATGCTGGGGGAGCGTCTGTTCCCGCTTATCCAAACAATGCATTCAAACCTGGCTGGGAAAATCACCGGGATGCTGCTGGAAATCGACAACTCTGAGCTGCTGCACATGCTGGAGTCCCCCGAGTCCCTCCGCTCCAAGGTAGATGAAGCGGTGGCAGTCCTGCAGGCTCACCATGCCAAGAAAGAAGCTGCCCAGAAGGTGggcactgttgctgctgctacctcttagacaagaaaaaaaGAGTCGAAAGCCAAATAACCCCTCATGGCATCCAGCTAAGGTCTGAAGACATCCTAGTTTGTCTGTGGACCTCCACACCAAGAACCAAGTTGCAAATTCAATAGGTCATTTTGTATCAGAAGGTCAATTATGAAGCACCTATAAGTTTTTCaattataagaatatattctctGGGTTCTGTTGTGACCCAgatgataacttttttttttctattatgggttctggttttttttttccctcatcccAGAAATTGGTTTTGATGTACCCAAGACTTAAGTTTctcaaataaaggaaataaaatctccATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAGAACTGTTGGGCTctgcatatattaaataaatttactttcccttttggttttt
>NM_148917.3
gaaaagaagaggaaaaaaaaaagcaaaagggaaaaaaagaagaaaaagaaccagaCAGCGACTTGTGCTGGGAGCCCGTGGGGAAGTGACTTTCACAGCTTCCGGCCTGCCTGTCCGTCAgcgtctgtctgtccgtccggtGGTGAGCCATCCCCCTCGGCCCGGCCCGCCCCTGCACGCCTCTGCGCCGCGTGGCAGCCCCGCGCCCCGGCTGGCCGCACCACGTGTCCGCACTGCCCTTCGCCGGCACCCGCAAAGATTTGGTTTCCCCCTTCCTGGGCTGCTGTAACTGTAAACCGCCGGGAGTCCGGGGCCTATATTTATCACGAAACGCGTGTTCCCAAGGCGGCCGTGAGCGCAGCATCTGATtgcctcttgaaaattttttGCCCCCTTTACGAGGGGATTtcctactttaatttttattttttaagcctcAAGCCAGGACAGCTGGAGAGTACAAACTCCAGGAGCGGGCCATATTGTTTTTGAGAGCCTTTTGTCTTGGGGCTTTTGCAGTCCCGTGCAAGTCGTCCCGCACACGGGTCCCGGCTCGGAGCCTCCCTGCTCCAGCCTTCTCCGGCGTCGCTGGTGCCACCTGTGCGCTGCGGCGCGTGCCATAGCTCCTCGGAGCCCCTTTTGTCCTGCAGTAGGCCTTGTTAGAAGTCCTCCTGGCGGGGCTCGGGGtcgtggggggtggggagatgaaCGCTGCAGCCAGCAGCTACCCCATGGCCTCCTTATACGTGGGCGATTTGCACTCGGACGTCACCGAAGCCATGCTGTATGAAAAGTTTAGCCCTGCGGGGCCTGTGCTGTCCATCCGGGTCTGTCGCGATATGATCACCCGGCGCTCTCTGGGTTATGCCTACGTCAACTTCCAGCAGCCAGCTGACGCTGAGAGGGCCTTGGACACCATGAACTTCGACGTGATGAAGGGAAAGCCGATCCGCATCATGTGGTCGCAGAGGGATCCCTCGTTGAGAAAATCTGGGGTGGGAAATGTCTTCATCAAGAACCTGGACAAATCCATAGACAACAAGGCACTGTATGacactttctctgcctttggAAACATCTTGTCCTGTAAGGTGGTCTGTGATGAGAACGGCTCTAAGGGCTATGCTTTTGTTCACTTCGAGACCCAAGAGGCCGCCGACAAGGCCATCGAGAAGATGAATGGCATGCTTCTCAATGACCGTAAAGTGTTCGTGGGTAGATTCAAGTCTCGCAAAGAGCGGGAAGCGGAGCTTGGAGCCAAGGCCAAGGAATTCACCAATGTTTATATCAAAAACTTTGGAGAAGAGGTGGATGATGGGAATCTGAAAGAGCTCTTCAGCCAGTTTGGTAAGACCCTAAGTGTCAAGGTGATGAGAGACTCCAGTGGGAAGTCCAAAGGCTTTGGCTTTGTAAGTTACGAGAAACACGAGGATGCCAATAAGGCTGTGGAAGAAATGAATGGAAAGGAAATGAGCGGGAAAGCCATATTTGTAGGCCGTGCACAGAAAAAGGTAGAAAGGCAGGCTGAGCTGAAGCGGAAGTTTGAGCAGCTCAAGCAGGAGAGGATTAGCCGGTACCAGGGGGTGAATCTCTACATTAAGAACTTGGATGACACCATTGATGATGAGAAATTGAGGAGagagttttctccctttggaTCAATCACCAGCGCGAAGGTGATGCTAGAAGATGGGAGAAGCAAAGGGTTTGGCTTTGTCTGTTTCTCCTCTCCTGAAGAGGCGACCAAAGCTGTCACCGAGATGAATGGACGCATTGTGGGCTCCAAGCCTCTGTACGTCGCCCTGGCCCAGAGGAAGGAAGAGCGGAAGGCTCATCTGACCAACCAGTACATGCAGCGTGTGGCGGGGATGAGAGCACTCCCTGCCAGTGCCATCTTAAATCAGTTCCAGCCTGCAGCTGGTGGCTATTTTGTGCCTGCAGTTCCGCAGGCTCAGGGAAGACCCCCATATTACACGCCTaaccagttagcacagatgaGGCCTAATCCACGCTGGCAGCAAGGCGGGAGACCTCAAGGCTTCCAAGGAATGCCAAGTGCCCTGCGGCAGTCTGGGCCTCGTCCAGCTCTTCGACATCTGGCTCCAACTGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTTGCTGCCGCCGCTCCCAGGGCTGTGGCTCCATACAAGTACGCCTCCAGTGTCCGCAGCCCACACCCTGCCATCCAGCCGCTGCAGGCCCCCCAGCCTGCAGTCCACGTCCAGGGTCAGGAGCCCCTGACTGCCTCCATGCTTGCTGCAGCGCCCCCCCAGGAGCAGAAGCAGATGCTGGGGGAGCGTCTGTTCCCGCTTATCCAAACAATGCATTCAAACCTGGCTGGGAAAATCACCGGGATGCTGCTGGAAATCGACAACTCTGAGCTGCTGCACATGCTGGAGTCCCCCGAGTCCCTCCGCTCCAAGGTAGATGAAGCGGTGGCAGTCCTGCAGGCTCACCATGCCAAGAAAGAAGCTGCCCAGAAGGTGggcactgttgctgctgctacctcttagacaagaaaaaaaGAGTCGAAAGCCAAATAACCCCTCATGGCATCCAGCTAAGGTCTGAAGACATCCTAGTTTGTCTGTGGACCTCCACACCAAGAACCAAGTTGCAAATTCAATAGGTCATTTTGTATCAGAAGGTCAATTATGAAGCACCTATAAGTTTTTCaattataagaatatattctctGGGTTCTGTTGTGACCCAgatgataacttttttttttctattatgggttctggttttttttttccctcatcccAGAAATTGGTTTTGATGTACCCAAGACTTAAGTTTctcaaataaaggaaataaaatctccATAAATATGGCTGAATTTGATGCCAGTTTTATGTTACAATCTTGGGCTTTTGCTAGAACTGTTGGGCTctgcatatattaaataaatttactttcccttttggttttt