Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Brat1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name BRCA1-associated ATM activator 1
Also known as Baat1
Coordinate chr5:140690246-140705134
Strand +
Gene summary A similar gene in human encodes a Breast Cancer 1 (BRCA1) interacting protein that is involved in cell cycle checkpoint signaling. The similar human protein is localized to DNA double strand breaks caused by ionizing radiation, and regulates cellular DNA damage response through interactions with Ataxia Telangiectasia Mutated (ATM) and DNA-dependent Protein Kinase. A pseudogene of this gene is located on chromosome 3. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2013]

Retrocopy(s) from Brat1

Retroname Coord Strand Genomic Region ENSG
Brat1P1 chr3:10035554-10037042 - Intergenic
ENSMUSG00000103698 UCSC

Expression

Transcript Sequences

>NM_001276287.1
GGAGATCCTGGTAAGGCGGAGTTCGAGCTTCGGCCAGGCAGTCTAATGGTGCATTTTGCACTCTCGGGCCTAATTCCCGTAGCGGAGGGATGCGGGGGCGGGATTAGAACCCCTAGGCTAACTCGCAGTCGCCGAGAGCGCACCTCTTACCCGGATTTGGGAGGAACTGCCTGCCTGATCATGGACCCAGAATGCTCCAGGCTCCTCCCGGCTCTCTGTGCTGTTTTGGCAGATCCCAGACAGCTGGTGGCAGATGACACCTGCTTGGAGAAACTGCTGGACTGGTttaaaacagtgacagaggcagAGTCTAGCCTCCAACTACTACAGGACCATCCCTGCTTAATGGAGCTCCTGTCCCATGTGCTGAAGCCACAGGACGTGAGCCCTAGGGTCCTCTCCTTTGCTCTGCGCCTTGTTGGGGTCTTCGCAGCCCAGGAAGACTGTTTTGAGTACCTTCAGCAGGGAGAGTTGTTGCTGGGGCTCTTTGGGGAGTCAGGTGCCCCCGGCTGGGCAGCCTGGAGCATCCCAAGTGTGCGCAGCGGCTGGATCCAGGGTCTGTGCTACCTGGCACACCACCCTAGCGCCCTGCACTTCCTGGCTGACAGTGGTGCTGTGGACACGCTCTTCTCCTTGCAGGGAGACCCCAGCCTGTTCGTCGCCTCAGCAGCCAGCCAGCTCCTAGTACATATCCTGGCTCTGTCCATGCAAGGTGGAGCCCCAGGGTCCCCCGTCCCTGAAGCTGCTGCTTGGCCTATGTGTgcccagaagattgtgaaccATGTGGATGAGTCCCTGCATGCCAAAGCCACCCCCCAGGTCACACAGGCCTTGAATGTCCTGACTACGACCTTCGGGCGCTGCCATAACCCCTGGACAGGGGTCCTCTGGGAGCGGCTAAGTCCCCCTGTTGCCCGCCTGTTTGAGAGAGACCCCATTCCAGCCGTGCACGCGCTCATGGACCTTCTTCTTAGTGTGGCCAGgtcGCCTGTGTTGAATTTTGCAGCCTGTGGCCTGTGGGAGATGCTGGCCCAGACTCTGAGCCGCCTGAGCCCCATACAAGCTGGGCCTCTAGCCCTGGGGACCCTGAAACTTCAGCACTGTCCCCAGGAATTGAGGACCCAGGCCTTTGGAGTCCTCCTACAGCCACTGGCCTGTATCCTGAAAGCTACCACTCAGGCCCCTGGACCTCCAGGCTTGCTGGATGGGACTGTGGGTAGCTTGCTGACTGTGGATATACTCTTGGCTTCAAAGTCAGCCTGTGTGGGACTCCTTTGCCAGACTCTGGCTCACCTGGAGGAGctgcagatgctgCCCCAGTGCCCCTCACCCTGGCCACAGGTGCATCTGCTGCAAGCTGCTTTGACTATATTGCATCTCTGTGATGGCTCAGCGGACCCCAGCTCCAGTGCAGGAGGCCGTCTCTGTGGGACTCTGGGTGGCTGTGTTCGTGTCCAGCGAGCAGCCCTTGACTTCTTGgggaccctgtctcaggggacaAGCCCCCTGGAGTTGGTTCTGGAGGTATTTGCTGTTCTCCTGAAGACCCTGGAGAGCCCAGAGTCCAGCCCCATGGTCCTAAAGAAGGCCTTCCAGGCCACACTCAGATGGCTCCAGAACCCACACAAGACCCCCAGCAGCTCTGATCTCAGCTCCGACGCCCTGCTGTTTCTCGGAGAGCTGTTCCCCATACTACAGAAGCGCCTATGCAGCCCATGTTGGGAGGTGAGGGACTCTGCCCTGGAGTTCCTGACGCATCTGATCCGACACTGGGGAGGGCAGGCTGACTTCAGAGAGGCACTGCGTTCCTCAGAAGTACCCACACTTGCCCTCCAGCTTCTCCAAGACCCAGAGAGTTACGTCCGAGCAAGTGCCGTGGGTGCCGCTGGGCAGCTCTCCAGCCAGGGTCTGCAGGCCGCTCCCGCTAGCCCCGAGAACTCGCAGGCCCAACAGGGCCTACTCATGGACCTTATGCATATCCTGTCCACTGACTCAGAGGGCTTCCCTCGAAGGGCTGTGTTACGGGTCTTCACGGACTGGCTGAGGGATGGCCATGCTGACGTGGTTCGAGACACGGAGTGGTTCGTGGCCACTGTTCTCCAGGCAGTGAGCCGGGATCTGGACTGGGAGGTCCGAGTGCAGGGTTTGGAGCTGGCACGGGTGTTCCTCACCCAGGCACTGGGCCAGCCCAGCCTCCACTGTCCCTATACAGTGGGCCTGCCCAGGGCCTCCTCTCCCCGCCCACACCCGGAATTCTTGCAGACTCTCTGCCGTCTGCCGCTCTTTGAGTTTGCCTTTTGTGCCTTGCTTGACTGTGACCGACCGGTGGCCCAAAAGGCCTGTGACCTGCTCCTCTTCTTGAGGGACAAGACAGTTCCCTGCAGTagccctcgggaggcaggggACAGCCCCAACTCAGCCTCAGTGGAGGCTGCCCTGCAGAGGTGGCGGGAAGGAGAGCAGGCCCAGCCCCTAGGGGACCTGGATCCTGAGGCCATGCTAGCCATCCTCAGGGCCTTAGACCTGGAGGGCCTGCAGGGCAGGCTGGCCAAGAGCAGCGACCATGTGGAGAAGAGCCCACAGTCCCTGCTGCAGGACATGCTGGCCACGGTGGGTGTGTTGGAGGAGAACGAAGCTGACTGCTACTAAGGCGTGTCCACGTCCTGTCCCTGTTTCCATCCTGTGCCAGCAGGAGGACCCCAGCCCAGGTCAGCAGCTCAAGAGACCCTGCAGGGGGTGGATCACATGTTTTAAGCCGGGTACGATAACACACCTATGATCACAGCGTTTAAAAGACCAAGGGAGGAGAATGTAGAGTTCCCGGCCAGCCTGGACTAGAtagcaaccctgtctcaagaaaacccaagaaatcaaatcaaaacaaaatctcCACCCTTTGTGTGCTGTGCATGCAGACCGGAGGCCAGCCTCCAGTGTTCTTCCTCAGGTGCtgtccaccttggtttttgagaaaaggtctctcaCTAGGACTTGGTACTCCCTGATGAGGcttgccagtgagctccagggatcccgcCACCACCTCCTCAGCACCGGGATCATAATACTGTATCCCTGTGCCTGGGTCTAcatacatgggtgctgggatttgaactcaggtcctcatgcttgcacggcaagcactttacccactgaaccatctccccaggtcCCACAGAATCCTACTTTCCACGTGTTATTAAAGAGGTGGCTTGTTTTCTGCTCAGAACAGGTAGTACTGATGTCTATAACCTTCAATTGTGTATGTGGATTAACAAAGCCCCACTGTGATCTGCATATGGCCTTCAGCTCTCTGCTCCGTCACCCAACGTTTGAAAGTCCCATAATCTTTAAAGAATTCAGATacattaaaagttcaaagtcacaACTGTGGgtcctgtaaaataaaataaaaaaaaattttttttaaa