RCPedia: Genes

Summary

Gene Name	Nlrp2	Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie	Mus musculus
Full Name	NLR family, pyrin domain containing 2
Also known as	E330007A02Rik\|NBS1\|Nalp2\|PAN1\|PYPAF2
Coordinate	chr7:5301546-5354034
Strand	-
Gene summary	Predicted to enable several functions, including Pyrin domain binding activity; aspartic-type endopeptidase inhibitor activity; and caspase binding activity. Predicted to be located in Golgi apparatus and cytosol. Predicted to colocalize with chromosome, telomeric region. Is expressed in early conceptus and gonad. Human ortholog(s) of this gene implicated in gestational trophoblastic neoplasm. Orthologous to several human genes including NLRP2 (NLR family pyrin domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nlrp2

Retroname	Coord	Strand	Genomic Region	ENSG
Nlrp2P1	chr19:15357623-15357952	+	Intragenic	N/A	UCSC

Expression

Transcript Sequences

>NM_177690.3
GTGAGACTGAGTGAAAGCTGGTGTGGTGGAGAGTTCTCTAGAGCTGAAAGCTCGGATCTCACCTGTGGGTCAAGATGGAACATTTTGATCCCCTGGGTTTCAACCTAAAAGACGTCCTGAGAAAGCTGGACAAGACTGAGTTGAACAATTTCAAGAGAACATTGAGGAGCTGTTCTCTGCCAGAtacaatgaaacagatcaacaagCTGACAATGGACCTGGCTAATGGAGCTCAGCTAGCAGAAATTCTCACAGACCACTGCCCCAGTGCTTGGATAAAGAGAGTCACCGTCCAGATCTTAGAGGAAATAAACCGTGTAGATCTAGCTGAGTTAGTAGTAAAGCAAATCGAAGaagcagTATTAAAGGTACCTGAGGAAAAGGTTTCTTCTAAACCAAGAGAACCCTCGGGGACACTAACTTTCCCATGGAATTTTGTTCAAGGAGCTAAAAGGCCAGAGGACAAGCAAAAAGAGGAATGGAAGACTAGATACACAGCTAAATGGAAGCAGAACTTCTGGCCTAAATGCAATAAAGAAATCTATGTGGTTACCGAGAGCTACAAGACACTCCTGGCATTGTGTAACCCAAAGATAGAAACCCCATTTGCTCATGCAATTGTGCTGCATGGCCCTCCAGGCTCTGGGAAAACCACAATGGCAAAGCAGCTAATGTTAGAATGGTCAGAGAGTAAGCAGGCCCAGATTTTCTCATGTGCCTTCTACATCAGCTGCAGGGAAGTAAATAATACTAAACCTTGCACTTTTGCCCACCTCCTCTCCATGGACAATCCCTCCTGGAGGGACTGTGTGATTCGAGATCTAATCCTGGGAAAGGAATTCTTATTTGTGGTAGATGGTTTTGATGAGCTGACATTCCCAGCAGGAGCTCTGATCCGTGACCTTTGTGGTGACTGGAACACAGTGAAGCCTGTAGAGGTCTTACTGGGCAGTTTGCTGAAGAGGAAGATGGCACCTCATGCCACCCTGCTGGTAACCACACGGACACAGTCTTTGCACCAAATCTTTGTCATGATGGATCAGCCACTACTAGTAGAAACTCTGGGCTTCTTGGAGCAAGAAAAGCAGGAGTACTTTCAGAAATACTTTGAAGatgaggagggtgaggaggaggataAAGGTGAGGGAAAGGCACTTAGAGCTCTCAAGGAAGTGAGATGCAATGCTGATCTATACCAAATGGCCTCACTTCCTACTGCATGTGGGATATTCTGCCTCTGTCTGGAGCTAAGGATGAAGAAGGGGGAAGACCTGTCTCTGACATGTCAGACATACACCTCTATGTTCCTGAACTTCCTGTGCGAAGTCTTCTCATCAGAAACCTGTGAGGACCATCTCAATGAGGAATTCCAAATCTTATTCAAGAAAATATGTATCCTGGCTGCCAATAGTCTCTTGGAACAGGTGCCCATACTCTGTGAAGAAGACTTcttgacattaaaattgaacctaAACAATTTGCATCCCATGGTGTGCAGGCACATCCTCTTTAAGGACAGTTCCAGTACACACTGTCTCTCTTTCATCTGCCTCGGTATCCAGCAACTCCTGGCTGCAATAATATTTGTTCAGGAGCTTGGACAGGAAAGCAAGGGTGTCTCTAAATATAGTATACAGAACATGCTTTCAAGGGAAGCAAGATTAAAAAACCCTGACCTGTCTGGGCTGCTGCCATTTGTATTTGGCCTCCTGAATGAGACTCGTATTCAAGAGTTGAAGACTACTTTTGGCTGCCAAATATCAACTGAGGTCAAGAGAAAATTCCTGGAGTGTGAGTCAGGGGAAAATAAACCCTTACTATTACTGATGAATATGCAAGAAATCTTGTCCTGTCTCTATGAATCTCAGGAGGAGGGGTTTGTGAAGGAAGCCATGGTCCTCTTTGAGGACATCTCCTTGCATTTGAAAACCAGCACTGACCTCATTCATGCTTCATTCTGCCTCAAGAACTCTCAGAACTTGCAGACAATGTCCCTGAAAGTAGAAAAGGCGGTCTTTCCAGAGAATGTTGCTGCACTAGAGTCCACAGCTAAGCATCAAAGGTCCCCGGATGAACAACGCATGTTAACTTTCTGGACAGACTTTTGTGACACATTTAATTCAAATAAGAAACTGGTATTTCTAGACATCCATGAAAGCTTCCTCAACAGCTCTGCACTGGAGATTCTTTGTGAAAAgctgccctctgcttcctgttgTCTCCAGAAAGTGGTCCTCAAAAATATTTCCCCAGATGATGCCTACGAGAAATTGTGCCTCATTTTTAATGGTTATAAAACCATCTCACATCTGATCCTGCAAGGTGGCAACCTGGACAGCATGCATCACTCACTGTGTGAGGTTCTGAAAAATCCAGCCTGCAACCTGAAGTTTCTCAGCCTGGGATCTTGTTCTACTGCTGCTCAGAAATGGGATGACTTCTTCCCAGTCCTGAAAGTCAATCAATCCCTGATATTTCTGGATCTCACAGACAACAGTCTCTTGGACAAAAGTGCTAAGCTCCTATGTAATATTTGGAAGGAACCAAAGTGCATACTGCAGAGGGTATCGTTGGAGAACTGTCAGCTCACTGAAGCCTGCTGCAAGGACCTCTCTTCCGTTTTGATGGTCAGCCGAACTCTGACACACCTCAGCCTGGCCAACAATAAACTTGGGGATAACGGAGTGAAAAACCTGTGTGAAAGCATAAGCTGCACGGAGTGCAATCTACAGACCCTGGTGCTGTGGTCCTGTAACATCACCAACGCTGGTTGCCACTATCTCTCAAAGATGCTCAAACAAACACTGAGCCTGAAACACTTGGATCTGGGGCTAAATCGCATCGGAACCAAAGGAGCAAAGTTTCTGTGTGAGGCTTTGAAGAACCCCAAGAGTAAATTGAAAAGTCTGTGGCTGTGTGGATGCTCCATCACTCCACTGAACTGCCAAGACTTCTCTGAGACTCTTAGAAGCAACAAGAGCCTGAACACTCTAGACCTGTCTCAGAACGTCCTGGGAACTGATGCCATAAAGACATTCTGTGAAGCCTTGAAACTTCAGATTTGCCCCCTGCAAATGCTTAGATTGAAATTTGATGAAGCTAAACCTAGTATCCAGAACCTGATCCAAGAGATGAAGGTGAGCCATCCACAACTGAGAATCAGCAGTGACCAAGTGGATCTTAAgaatcctcctcttcctcatttcaTTTTTTGAGGCCATTCTTCTCCAAAAGATGTGGGTGAAGACTCTCTGGGCACCCTCTCTGATTTATTGGCATCTGAGATAAATGTCCTTATCCTTCCCAGATCTATGTATAAAACTCACAAATGTCATTAAACAGGAATAAATGTAAAACATTCGTATCACTGGTATATTGGGGAATAAAAGGGAAAACATGCATGA