Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name COTL1
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name coactosin like F-actin binding protein 1
Also known as CLP
Coordinate chr16:84565596-84618078
Strand -
Gene summary This gene encodes one of the numerous actin-binding proteins which regulate the actin cytoskeleton. This protein binds F-actin, and also interacts with 5-lipoxygenase, which is the first committed enzyme in leukotriene biosynthesis. Although this gene has been reported to map to chromosome 17 in the Smith-Magenis syndrome region, the best alignments for this gene are to chromosome 16. The Smith-Magenis syndrome region is the site of two related pseudogenes. [provided by RefSeq, Jul 2008]

Retrocopy(s) from COTL1

Retroname Coord Strand Genomic Region ENSG
COTL1P1 chr17:16853861-16856114 + Intergenic
ENSG00000229749 UCSC
COTL1P2 chr17:20564463-20564743 + Intergenic
ENSG00000235323 UCSC

Expression

Transcript Sequences

>NM_021149.5
AGTGGAAGCCGCCGCCGCGCTCGCAGCTTGCAGGCGCCGCGTAGCCGTCGCCACCGCCGCCAGCCCGTGCGCCCTCGGCGCGTACCCGCCGCGCTCCCATCCCCGCCGCCGGCCAGGGGCGCGCTCGGCCGCCCCGGACAGTGTCCCGCTGCGGCTCCGCGGCGATGGCCACCAAGATCGACAAAGAGGCTTGCCGGGCGGCGTACAACCTGGTGCGCGACGACGGCTCGGCCGTCATCTGGGTGACTTTTAAATATGACGGCTCCACCATCGTCCCCGGCGAGCAGGGAGCGGAGTACCAGCACTTCATCCAGCAGTGCACAGATGACGTCCGGTTGTTTGCCTTCGTGCGCTTCACCACCGGGGATGCCATGAGCAAGAGGTCCAAGTTTGCCCTCATCACGTGGATCGGTGAGAACGTCAGCGGGCTGCAGCGCGCCAAAACCGGGACGGACAAGACCCTGGTGAAGGAGGTCGTACAGAATTTCGCTAAGGAGTTTGTGATCAGTGATCGGAAGGAGCTGGAGGAAGATTTCATCAAGAGCGAGCTGAAGAAGGCGGGGGGAGCCAATTACGACGCCCAGACGGAGTAACCCCAGCCCCCGCCACACCACCCCTTGCCAAAGTCATCTGCCTGCTCCCCGGGGGAGAGGACCGCCGGCCTCAGCTACTAGCCCACCAGCCCACCAGGGAGAAAAGAAGCCATGAGAGGCAGCGCCCGCCACCCTGTGTCCACAGCCCCCACCTTCCCGCTTCCCTTAGAACCCTGCCGTGTCCTATCTCATGACGCTCATGGAACCTCTTTCTTTGATCTTCTTTTTCTTTTCTCCCCCTCTTTTTTGTTCTAAAGAAAAGTCATTTTGATGCAAGGTCCTGCCTGCCATCAGATCCGAGGTGCCTCCTGCAGTGACCCCTTTTCCTGGCATTTCTCTTCCACGCGACGAGGTCTGCCTAGTGAGATCTGCATGACCTCACGTTGCTTTCCAGAGCCCGGGCCTATTTTGCCATCTCAGTTTTCCTGGACCCTGCTTCCTGTGTACCACTGAGGGGCAGCTGggccaggagctgtgcccggtgcctgcagccttcataagcacacacgtccattccctactaaggcccagacctcctggtatctgccccgggctccctcatcccacctccatccggagttgcctaagatgcatgtccAGCATAGGCAGGATTGCTCGGTGGTGAGAAGGTTAGGTCCGGCTCAGACTGAATAAGAAGAGATAAAATTTGCCTTAAAACTTACCTGGCAGTGGCTTTGCTGCACGGTCTGAAACCACCTGTTCCCACCCTCTTGACCGAAATTTCCTTGTGACACAGAGAAGGGCAAAGGTCTGAGCCCAGAGTTGACGGAGGGAGTATTTCAGGGTTCACTTCAGGGGCTCCCAAAGCGACAAGATCGTTAGGGAGAGAGGCCCAGGGTGGGGACTGGGAATTTAAGGAGAGCTGGGAACGGATCCCTTAGGTTCAGGAAGCTTCTGTGTAAGCTGCGAGGATGGCTTGGGCCGAAGGGTTGCTCTGCCCGCCGCGCTAGCTGTGAGCTGAGCAAAGCCCTGGGCTCACAGCACCCCAAAAGCCTGTGGCTTCAGTCCTGCGTCTGCACCACACATTCAAAAGGATCGTTTTGTTTTGTTTTTAAAGAAAGGTGAGATTGGCTTGGTTCTTCATGAGCACATTTGATATAGCTCTTTTTCTGTTTTTCCTTGCTCATTTCGTTTTGGGGAAGAAATCTGTACTGTATTGGGATTGTAAAGAACATCTCTGCACTCAGACAGTTTACAGAAATAAATGTTTTTTTTGTTTTTCAGAAAA