Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Cnot1
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name CCR4-NOT transcription complex, subunit 1
Also known as 6030411K04Rik|D830048B13
Coordinate chr8:96445559-96534741
Strand -
Gene summary Predicted to enable armadillo repeat domain binding activity; molecular adaptor activity; and nuclear receptor binding activity. Predicted to contribute to poly(A)-specific ribonuclease activity. Involved in regulation of stem cell population maintenance and trophectodermal cell differentiation. Located in P-body. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in holoprosencephaly. Orthologous to human CNOT1 (CCR4-NOT transcription complex subunit 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cnot1

Retroname Coord Strand Genomic Region ENSG
Cnot1P1 chr14:24119802-24120966 + Intergenic
 ENSMUSG00000090381 UCSC

Expression

Transcript Sequences

>NM_001372353.1
GGGCGCCATTTTGTCGAGAAAACAAGCGGAGTTAACCGAAGAGGGGGGTCGAGGAGAGCCGGAGTCGAGGACCCAGGAGTTTCCTGTGTCCAGCGCTGCGGGAGCCGACTGAGGTGCCATGTTTCAGAACAGAGTAAGACACTTGGTAAAGAAGAACTGAAGACATTTACAGATAACAGAGATAGCCTAATTACAAAGAAAGCATTAACCTGCCTCTGAGGTGACTAAAGGGGAATAATGGTGATTTTGCGCCGGGCTCGGCCGCCTGCTTCCGCCCCAACCAGCAATGAATCTTGACTCGCTCTCGCTGGCCTTGTCTCAAATCAGCTACCTGGTGGACAATTTAACCAAGAAAAACTACCGAGCCAGCCAGCAGGAAATACAGCATATTGTGAATCGGCACGGTCCTGAGGCAGACAGGCATTTATTACGCTGCCTATTTTCACATGTGGATTTCAGTGGCGATGGTAAAAGCAGTGGCAAAGATTTCCATCAGACACAGTTTCTGATTCAGGAGTGTGCCTCGCTGATTACAAAGCCAAATTTTATCTCAACATTGTCATATGCCATTGATAATCCATTGCACTACCAGAAGAGTTTAAAGCCTGCACCCCACTTATTTGCCCAGCTGAGTAAAGTTCTCAAGCTAAGTAAAGTACAGGAGGTCATTTTTGGTCTTGCCCTTTTGAATTCTTCTAGCCCAGATCTCAGGGGTTTTGCTGCCCAGTTTATTAAACAGAAGCTTCCGGATCTTCTGCGTTCTTACATTGACGCAGACGTCAGTGGAAATCAAGAAGGTGGCTTCCAAGATATAGCAATAGAGGTCCTACACCTCCTACTCTCCCATCTCCTCTTTGGGCAGAAGGGAGCCTTTGGAGTTGGACAGGAACAGATAGACGCCTTTCTTAAGACACTACGCAGAGatttTCCCCAAGAGCGCTGTCCTGTGGTGCTTGCACCACTTTTATACCCTGAAAAACGGGACATTCTAATGGACAGGATTTTGCCTGATTCTGGAGGGGTAGCTAAAACCATGATGGAGAGCTCGCTAGCTGACTTCATGCAGGAAGTGGGCTATGGCTTTTGTGCAAGTATTGAAGAATGTCGCAATATAATCATGCAGTTTGGTGTTCGGGAGGTCACAGCTGCCCAGGTTGCCAGGGTTTTGGGAATGATGGCTCGGACTCATTCAGGATTAACAGACGGTATTCCATTACAGAGCATCTCTGCTCCTGGCAGTGGGATCTGGAGCGACGGAAAAGATAAAAGCGAGGGggcacaggcacacacgtggAATGTCGAGGTTTTGATTGATGTTCTTAAAGAGCTGAACCCGAGTTTGAATTTCAAGGAAGTAACTTATGAACTGGACCATCCTGGATTTCAGATTCGTGACAGCAAAGGACTTCACAATGTGGTTTATGGCATTCAAAGGGGTCTGGGCATGGAAGTGTTTCCAGTAGATTTTATATATAGGCCTTGGAAACATGCAGAAGGCCAGCTCTCCTTCATCCAGCATTCCCTGATAAACCCAGAGGTCTTCTGTTTTGCTGACTACCCCTGTCACACTGTTGCCACTGATATTTTGAAAGCACCACCAGAGGATGACAATCGAGAAATTGCCACATGGAAAAGCTTGGATTTGATTGAATCTCTGCTGAGGCTTGCAGAGGTTGGGCAGTATGAGCAAGTGAAACAACTCTTCAGCTTCCCTATCAAACACTGTCCAGACATGTTGGTATTGGCCTTACTTCAAATCAACACTTCCTGGCACACCCTACGCCATGAACTCATCTCTACTTTGATGCCAATTTTCCTTGGAAACCATCCTAACTCTGCCATTATTTTGCACTATGCATGGCATGGGCAGGGGCAGTCTCCATCAATTCGCCAACTTATAATGCATGCAATGGCAGAATGGTACATGAGAGGGGAGCAGTATGATCAGGCCAAATTGTCTCGAATACTTGACGTGGCCCAGGACTTGAAGGCCCTGTCGATGCTGCTGAACGGCACTCCATTTGCTTTTGTCATTGACCTTGCTGCACTCGCTTCACGGCGGGAATACCTCAAACTTGACAAGTGGCTAACAGATAAGATAAGAGAGCATGGGgagcCTTTTATACAAGCATGTATGACTTTTTTAAAGAGAAGGTGCCCTTCTATTTTGGGTGGACTTGCCCCAGAGAAAGATCAGCCCAAAAGTGCTCAACTTCCCGCTGAAACTCTGGCAACAATGTTGGCTTGTCTGCAGGCTTGTGCAGGGAGTGTTTCTCAAGAGTTATCAGAGACCATCCTCACCATGGTAGCCAATTGCAGTAATGTAATGAATAAGGCCAGACAGCCACCACCTGGAGTTATGCCAAAAGGTCGCCCTCCTAGTGCTAGCAGCTTAGATGCCATTTCTCCTGTTCAGattGACCCTCTTGCTGGAATGGCATCTCTTAGTATAGGTGGTTCGGCTGCCCCTCACACCCAGAGCATGCAGGGTTTTCCTCCAAATCTGGGTTCTGCGTTCAGTACCCCTCAGTCACCAGCAAAAGCATTTCCACCACTTTCAACCCCAAATCAAACAACGGCCTTCAGTGGGATTGGAGGACTCTCCTCACAGCTTCCAGTAGGTGGTCTTGGCACAGGAAGCCTGACTGGCATAGGAACTGGGGCCCTTGGACTTCCTGCAGTGAACAATGATCCTTTTGTACAGAGGAAACTGGGCACCTCTGGACTCAACCAGCCTACATTCCAGCAGAGTAAGATGAAACCTTCCGACTTGTCTCAGGTGTGGCCAGAGGCAAATCAGCACTTTAGTAAAGAAATTGATGATGAAGCAAACAGTTATTTCCAGCGAATATATAATCACCCACCACATCCAACCATGTCTGTTGATGAGGTATTAGAAATGCTACAGAGATTTAAAGACTCTACAATAAAAAGGGAACGAGAAGTATTTAACTGTATGCTGAGGAACTTGTTTGAAGAATACCGGTTTTTCCCTCAGTACCCTGATAAAGAATTACATATAACAGCTTGCTTGTTTGGTGGCATAATTGAAAAAGGACTGGTCACTTACATGGCATTGGGTCTGGCCCTGCGATATGTTCTTGAAGCCTTACGGAAGCCTTTTGGATccaaaatgtattattttggtaTTGCTGCACTAGATAGATTTAAAAATAGATTGAAGGACTATCCTCAGTATTGTCAGCACCTGGCTTCTATCAGCCACTTTATGCAGTTCCCACATCATTTGCAGGAGTACATTGAGTACGGACAGCAGTCTCGAGATCCTCCTGTGAAAATGCAGGGCTCTATTACTACCCCTGGAAGTATTGCACTGGCTCAGGCCCAGGCTCAGGCCCAGGTTCCAGCAAAAGCTCCTCTTGCCGGTCAGGTTAACACAATGGTAACCACCTCAACAACCACCACTGTTGCTAAAACGGTTACAGTCACCAAGCCAACGGGAGTCAGCTTTAAGAAAGATGTGCCACCTTCTATAAATACAACAAATATCGATACATTGCTTGTGGCCACAGATCAAACTGAGAGGATTGTGGAGCCCCCAGAAAATATTCAAGagaaaattgcttttattttcaacAATCTCTCCCAGTCAAATATGACACAGAAGGTTGAAGAGCTTaaagaaactgtgaaggaagaatTTATGCCTTGGGTTTCCCAGTATCTGGTTATGAAAAGAGTCAGTATTGAGCCAAACTTTCATAGCCTGTATTCAAACTTTCTTGATACATTGAAGAATCCTGAATTTAACAAGATGGTTCTGAATGAAACCTACAGAAACATTAAAGTGCTGCTGACTTCTGATAAAGCTGCGGCCAATTTCTCAGATCGTTCTTTGCTGAAGAACTTGGGACATTGGTTAGGAATGATCACATTAGCTAAAAATAAACCCATCTTACACACAgACTTGGATGTGAAATCTTTGCTGTTAGAGGCTTACGTTAAAGGACAGCAAGAGTTGCTCTATGTGGTGCCCTTTGTTGCCAAAGTTCTAGAGTCCAGCATTCGCAGCCTGGTTTTTAGACCACCAAACCCCTGGACAATGGCAATTATGAATGTATTGGCTGAGCTGCATCAGGAGCATGACTTAAAGTTAAACCTGAAGTTTGAGATTGAGGTGCTCTGTAAGAACCTTGCATTAGACATCAATGAGCTCAAACCTGGAAACCTGCTGAAAGATAAAGATCGTCTGAAGAACTTAGATGAGCAACTCTCTGCTCCAAAGAAAGATGTCAAGCAGCCCGAAGAGCTTCCTGCCATCACAACAACAACAACTTCTACAACACCAGCTACCAGTACTACGTGTACAGCCACAGTTCCACCACAGCCACAGTACAGCTACCACGACATCAATGTCTACTCTCTAGCAGGCCTGGCACCTCATATTACTCTAAACCCTACAATCCCTTTATTTCAAGCTCATCCTCAGCTGAAGCAGTGTGTGCGGCAAGCAATTGAAAGAGCTGTCCAGGAGCTTGTCCATCCTGTGGTGGATCGCTCAATTAAGATTGCTATGACTACGTGCGAACAGATAGTCAGAAAGGACTTTGCCCTGGATTCTGAGGAGTCTCGAATGAGAATAGCAGCTCATCACATGATGCGGAACTTGACAGCTGGAATGGCTATGATTACTTGCAGGGAACCTTTACTGATGAGCATATCCACCAACCTCAAAAACAGCTTTGCCTCAGCCCTGCGTACTGCATCCCCACAGCAAAGGGAAATGATGGACCAGGCTGCTGCTCAGTTAGCTCAGGACAATTGTGAATTAGCTTGTTGTTTTATTCAGAAAACTGCAGTGGAGAAAGCAGGCCCTGAGATGGACAAGAGATTGGCAACTGAATTTGAGCTGAGGAAGCATGCCCGGCAAGAAGGACGTAGGTACTGTGATCCTGTGGTCTTAACCTACCAAGCCGAGCGGATGCCGGAGCAGATCAGGCTGAAAGTTGGTGGTGTGGACCCAAAGCAGCTAGCCGTCTATGAAGAGTTTGCACGAAATGTGCCTGGCTTCTTACCTACAAATGACTTAAGTCAGCCTACAGGGTTTTTAGCTCAGCCCATGAAGcAAGCTTGGGCAACTGATGATGTAGCGCAGATTTATGATAAGTGTATTACAGAACTGGAGCAGCACCTACACGCCATTCCACCCACTCTGGCCATGAATCCTCAAGCCCAGGCTCTCCGAAGTCTTTTAGAGGTTGTAGTGTTGTCTCGGAATTCTCGGGATGCGATAGCTGCTCTTGGATTACTACAGAAGGCTGTAGAAGGCTTATTAGATGCCACAAGTGGTGCTGACGCCGACTTACTGCTGCGATACAGGGAGTGCCACCTGTTGGTACTGAAAGCTCTGCAGGATGGCAGGGCATATGGATCTCCATGGTGCAACAAACAAATCACAAGGTGCCTAATTGAATGTCGagatgaatataaatataatgtgGAGGCTGTGGAATTGTTAATTCGAAATCATTTGGTTAACATGCAGCAGTATGATCTTCATCTTGCTCAGTCGATGGAGAATGGCTTGAACTATATGGCCGTGGCGTTTGCTATGCAACTGGTAAAAATTCTGCTGGTGGATGAAAGGAGTGTTGCCCATATTACTGAGGCAGATCTGTTCCATACCATTGAAACCCTCATGAGAATTAATGCTCATTCCAGAGGCAATGCTCCAGAAGGGTTGCCCCAGCTGATGGAAGTGGTGAGATCCAACTATGAAGCAATGATTGATCGTGCTCATGGAGGCCCTAACTTTATGATGCATTCTGGGATCTCTCAAGCCTCAGAATATGATGACCCTCCAGGCCTGAGGGAGAAGGCAGAGTATCTTCTGAGGGAATGGGTGAATCTCTACCATTCAGCAGCAGCTGGCCGCGACAGTACCAAAGCATTCTCTGCGTTTGTTGGACAGATGCACCAACAAGGAATACTTAAAACTGATGACCTCATAACAAGGTTTTTTCGTCTTTGCACTGAAATGTGTGTTGAAATCAGTTACCGTGCTCAGGCGGAGCAGCAGCACAATCCTGCGGCTAACCCTACCATGATCCGGGCCAAGTGCTACCACAACCTGGATGCCTTTGTCCGCCTCATTGCACTGTTAGTGAAGCACTCTGGGGAGGCCACCAACACTGTCACAAAGATCAACCTGCTCAATAAGGTTCTCGGTATAGTAGTGGGAGTTCTCCTACAGGATCATGATGTTCGGCAGAGTGAATTTCAGCAACTTCCGTACCATAGGATTTTTATCATGCTGCTGTTGGAGCTCAATGCACCCGAGCATGTGTTGGAAACCATTAATTTCCAGACTCTTACTGCTTTCTGcaatacATTCCACATCTTGAGACCTACTAAAGCTCCTggctttgtatatgcttggctcgaATTGATTTCCCATCGGATCTTTATTGCAAGAATGCTGGCACATACGCcacagcagaagggGTGGCCTATGTATGCTCAGCTGTTGATTGATTTATTCAAATATTTAGCACCTTTCCTTAGAAATGTGGAACTCACTAAACCTATGCAAATCCTCTACaagGGTACTCTGAGAGTGCTGCTGGTTCTTTTGCATgatttcccagagttcctttgtgattaccATTATGGGTTCTGTGATGTGATCCCTCCTAATTGTATCCAGTTAAGAAATTTGATCCTGAGTGCCTTCCCAAGAAACATGAGGCTCCCAGACCCATTCACTCCTAATCTGAAGGTGGACATGTTAAGCGAAATTAACATCGCACCTCGGATCCTCACCAATTTCACTGGAGTGATGCCGCCTCAGTTCAAAAAGGATTTGGATTCTTATCTTAAAACTCGGTCGCCGGTCACTTTCCTGTCTGATCTGCGTAGTAACCTACAGGTATCTAATGAGCCCGGGAATCGCTACAACCTCCAGCTTATCAATGCATTGGTGCTCTACGTAGGGACTCAGGCTATCGCACACATCCACAACAAGGGCAGCACGCCCTCAATGAGCACCATCACCCACTCAGCACACATGGACATCTTCCAGAACCTGGCTGTGGACCTAGACACTGAGGgCCGATATCTCTTCTTAAATGCAATTGCGAACCAGCTACGGTACCCAAACAGCCACACTCACTACTTCAGCTGCACAATGTTGTACCTTTTTGCTGAGGCGAACACTGAGGCAATCCAGGAACAGATCACAAGGGTTCTCTTGGAACGGTTGATTGTAAATAGGCCACATCCTTGGGGTCTTCTTATCACCTTCATTGAGCTGATTAAAAACCCAGCATTTAAGTTCTGGAACCATGAATTTGTACACTGTGCCCCAGAGATTGAAAAGTTATTTCAGTCTGTTGCACAGTGCTGCATGGGACAGAAGCAGGCTCAGCAAGTGATGGAGGGGACCGGTGCCAGTTAGATGAACTGTGTATATCCCTTGCAGATGCATCAGCCTTGGTCCGCTGAACCAAGTTCATAAACTGAAGATTCCTCCTGACTTTCCTAGCCCTTTGGTTCTCAGGGGTCTGCCCCACCAACTGCTGGGGTTGATCTCCTGTCTATGTGGGCAAGTTCCAAagtttaaatgcattttttttttgactcttggCCAAAATTTAGAAGATGCTGTGAATATCATTTTGAACTTGTGTAAATATATGAAAGAGAAAACTTTTGTCTGAAACTTCTTGGGTTTGTGTAAAGTGTGTACGTATGTAAACTACCTTGTAACAGGCAGTTGATGGCATGCTCTTGTCTCAAGCATAGCAGCATGTCTTCCGACATCCATGACATTCCAAAGATTAGCAAATACTGAAttcatgcaatttttttttaaaacgtaGCTAAGGAAGCTTACAAAGCCACATAAGTTATAAGTGTAGACTAGATAGACCAGGGGGTTCTGCTTGCCTCTGGAAAGGTAGTTGACCTGCTTTGGTGGTCCTAAGGGAGAACATACCCAAAGAGGAACATCTCTGGCCTGCGATTCTGCTTCACCTTGTTTAGGCTGTACAGCCTAGTTAAACAACAAAAGTCAAAAAGACTACTACAGCTGCTGCTTTTTATAAGGATCAGGATCGTAAATGTTCCGTGAACAGCTAGGCCCGTGTTATATTTTGTAGCCTTTGTAGTTTCTGGGCCTTAATCAGCTTTCATGTATGTGTGAAGACGGTAAACATTAAAGTCATGACATGCATATGAGTCCACTGTGCCTTtctcagtagcagcagcagccagtgctGGTTGTAAACGTGGACAACCCAGCCAACTGGGAaatgtcactttaaaaaaaaagatgtattgattttatatatgtgagtacactgatgctgtcttcagacgcaccagaagagggcatcagctcccactacagatggttgtgagccaccatgtggtttctgggaattgaactcaggacctctggaagagcagtcagtgctctttaccactgagccatctctccagcccaatagtCACTTCTTAATGACCAGATTTTCCTGTTACTACTTGATTCTTTGGGAGTCCTGCTATTGCATAGTCCAGGCTAGCATCCCTTGCCTCACTGGGACATTACAACCATCCCCAGTAAGGACATTTTGTGTACCATTTCTGTGTCGACTGGAGGAAGCTGTTAGAGCAAGAAAATCTGTGTGGttaaactatatttaaaaacTTGTGTGGGGGTTTTGTCTTGGTATGAGTATTTGGAAGAATTCCACTTCTAATTAATTTGTCCTTGAGAGGTGAGTTGTGATAAGACTGATGGTCCAGTAAGATGTCATACTTCACGGGAATGTGCTAAAGAAAGTTTGAACTTCTCAAAGTTGAACTCAGCCCATGTTTATTAAGTTCTAAAAAAATCTGATGGCATTAGTAAAAATAGCATGCTCCTAAA