Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Phaf1
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name phagosome assembly factor 1
Also known as D230025D16Rik|Lin10
Coordinate chr8:105951779-105979685
Strand +
Gene summary Predicted to enable PDZ domain binding activity and glutamate receptor binding activity. Predicted to be involved in Golgi to plasma membrane protein transport. Predicted to be located in membrane and phagophore assembly site. Predicted to be active in dendrite; synaptic vesicle membrane; and trans-Golgi network. Is expressed in several structures, including adrenal gland; genitourinary system; liver; lung; and spleen. Orthologous to human PHAF1 (phagosome assembly factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Phaf1

Retroname Coord Strand Genomic Region ENSG
D230025D16RikP1 chr10:55975615-55978167 - Intragenic
Intragenic
 ENSMUSG00000112528 UCSC

Expression

Transcript Sequences

>NM_145604.3
AGTTGCTCTGGGCGCTGCTGTTGCTACAGCCTCTCCTGCCGGGGCTGCTGCCCGGGAGGTTGAAGGGAGGTGAAGTGTGTTGTTGTGTTCGTGCTGCCGTCGCCGCCCGGAACCGAGTGGAGAGCCGGACGTCCGCGGGCTGGCGAGAGCGACCAGTCAGCAGCTGCGTGCTCTCCTCAGGCCGGGTCCTGTCTGCGCTGCCGCAGGGAGGCCGCCCGGCCCAGCGAACCGACCCAATGCTGGACCTGGAGGTGGTGCCTGAACGCTCTCTGGGGAACGAGCAATGGGAATTCACTCTGGGAATGCCTCTGGCGCAGGCGGTCGCCATTCTTCAGAAGCACTGTCGCATCATCAGAAACGTCCAGGTTCTCTACAGTGAGCAGtcTCCTCTAAGCCATGACCTCATCCTTAACCTGACTCAGGACGGGATCACACTACTGTTTGATGCTTTCAACCAGAGACTCAAGgtGATTGAAGTTTGTGAGTTGACAAAAGTAAAGTTAAAGTATTGTGGAGTGCATTTTAACTCTCAGGCCATCGCTCCTACCATTGAGCAAATTGACCAGTCTTTTGGCGCAACCCATCCTGGAGTGTACAACTCTACTGAGCAGCTCTTCCACCTCAACTTCCGAGGActgtctttctcttttcagtTAGACTCGTGGACGGAGGCTCCCAAGTATGAGCCCAATTTTGCCCATGGTCTAGCTTCTCTTCAGATACCCCATGGAGCAACTGTAAAACGAATGTACATCTATAGTGGGAACAGCCTCCAGGATACCAAGGCTCCTGTGATGCCCTTGAGCTGTTTCCTGGGGAATGTATATGCTGAAAGTGTAGACGTTCTTCGAGATGGAACTGGACCCTCAGGGTTGCGACTTCGCTTGCTCGCTGCAGGTTGTGGACCTGGAGTGTTAGCAGATGCCAAAATGAGAGTATTTGAGCGTGCGGTGTATTTTGGTGATTCTTGCCAAGATGTTCTTAGCATGCTTGGCTCTCCACACAAAGTCTTCTATAAATCTGAAGACAAGATGAAAATTCACTCTCCTTCCCCTCATAAACAAGTTCCGTCCAAGTGCAACGACTACTTTTTTAACTATTTTACTCTCGGAGTGGACATCCTGTTTGATGCAAATACACACAAAGTGAAGAAGTTTGTCCTGCATACCAATTACCCTGGGCATTATAATTTTAACATTTACCAccgctgtgagttcaagatcccACTGGCCATAAAGAAAGAAAATGCAGGTGGTCAGACTGAAATATGCACAACCTACAGCAAGTGGGACAGCATCCAGGAGCTTCTGGGCCATCCTGTGGAGAAGCCTGTTGTCTTGCACAGGTCCTCATCCCCAAATAACACCAATCCGTTTGGCTCCACATTCTGCTTTGGTCTTCAGCGGATGATCTTTGAGGTCATGCAGAACAACCACATTGCCTCAGTGACCCTGTATGGCCCCCCCAGGCCTGGTGCCCACCTGAGAACAGCAGAGCTGCCCTAAGGACATCACTGTTTTCCCTGTCCATGGAACTGTGCGTCACATCCAGCTCAGTGGGTCTCTGTGCCACCCTGTGTGTTTGCTTGGACACCTTGGCAGTGTTGAAGGGCCCTGGGACTCAGAAGGGTTTGGAAGTAGGATTTGGGCTGAGTCCTCTGCCGTGGGACGGAGGACCCAGATACTCTGTCCTAAGCCTGCTGTTGCCAGGAGAGAACACAGTGTGCAAAAAGAAGCACAAACTTAGAGCCATGATGAGGGCTCTCATAACTAACATGTAATAAAGGACACGTCAGCCCCTGCCCTGCTCACATAGGGAAGACAGGACTCTTTCTCTAGCTAAGAAAATATTCCCAGGATGAGAACAGGCTCCTGCTTTTGGCCCGACATTGCCACGTGGCCCCTAAGGTGAGCAGAGCAGGTAGCATGTCGGTAGTACTTGGTTGCAATATTTGCACTCCATCCACTTTAGTGACTTGATGAGCTGGCTGTGGCTGGTGTGGCCCACTGCCCTTCCCTGCTTCTCCTGTGAGTGCTCCTTGCCGTGCCCAGGTGGCACCTAAGTGGATGAAATCGTTTCCTACCAGGTATGTACCAGGCCTGGTTCCCACTGCTGCTCTGGGAGCCAGCCTTTAAGGTCACCTGTGTCTCTTGGTCCAACCTGGCTGACAGGGCTGCATGTCTCCATCTTGTTTGCCTCTTTTATTTAATGCCAAAGTGTTAGCCAAAGACACCTTCCTCCTTTTGTTACATTACAGCATTCTGTTATGCACTGTGGGCCAGCTCCTTGCCCTAGTTCTGGgcactggcctggcctggcctggctacTTGGTTTGAGGCCTAGAGGCTCAAGGAACACTAGGCTGCTTGGTTTCTTACATGGGTCTTGCTAATGGGAAGTAGCATATATGTGCTTTAAAATAGTAATCCTTTTGAAAAGAATTGAGAAGAGAAACATATAAttttatcccatttttaatattttggtcTAGCAACTTGTGATACATAGATGACAATTTTGTGAGTTTTTCAAATGTGTGTACAGATTTTTGTAAATAATGACTTTTGTAATTAACTCATGTACAGCCTCATCTTGTATAGTTCATGATGAATGTGCAGGGGACCTGCCCCAGCTGTCTGTATGGTTCCTGGGCCTACAGCCAGGCCTGTGTGGCACTCCCATGACTGATTTGACAGGTGTCTTCCCATTTGGACCTTCGTCTGGCCAGAGACCCTGCACATCCCACTGTCAGGGTAGCCAGGACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCAATAAAGCacctatgcccacagtgacagCGTGCCATGTGCTGCCACTGGGCTGTTTGTACTAAAA