Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Chmp1a
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name charged multivesicular body protein 1A
Also known as 2900018H07Rik|Pcoln3
Coordinate chr8:123931000-123939527
Strand -
Gene summary Predicted to enable protein domain specific binding activity and protein homodimerization activity. Predicted to be involved in several processes, including midbody abscission; mitotic sister chromatid segregation; and regulation of cell cycle process. Predicted to be located in early endosome; microtubule organizing center; and nuclear lumen. Predicted to be part of ESCRT III complex. Predicted to be active in multivesicular body. Is expressed in 4th ventricle choroid plexus; 4th ventricle choroid plexus epithelium; cerebellum; cerebellum Purkinje cell layer; and cortical plate. Human ortholog(s) of this gene implicated in pontocerebellar hypoplasia type 8. Orthologous to human CHMP1A (charged multivesicular body protein 1A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Chmp1a

Retroname Coord Strand Genomic Region ENSG
Chmp1aP1 chr3:67513084-67515188 - Intergenic
 ENSMUSG00000103206 UCSC

Expression

Transcript Sequences

>NM_145606.3
GACAGCCGGCCGCGCGACCGGAAGCGGTGGCGACCCCGGAAGCCCTCGCGGAGACAGCGGGTCCGTAACATCGCGTCCCCTGCGCCGCCCCGAGGGCTGTGCTAGCCCGACCGGCCATGGACGATACCCTGTTCCAGTTGAAGTTCACAGCGAAGCAGCTGGAGAAACTGGCCAAGAAGGCCGAGAAGGACTCCAAGGCTGAGCAGGCCAAAGTGAAGAAGGCCCTTCAGCAGAAAAATGTGGAGTGTGCCCGGGTGTATGCTGAAAATGCCATCCGCAAGAAGAATGAAGGTGTAAATTGGCTCCGAATGGCCTCCCGTGTGGACGCAGTGGCCTCCAAGGTGCAGACAGCTGTGACCATGAAGGGGGTGACCAAGAATATGGCCCAGGTGACCAAGGCTCTGGACAAGGCCCTGAGCGCCATGGACCTTCAGAAGGTGTCTGCAGTGATGGACAGGTTTGAGCAGCAGGTGCAGAACCTGGATGTGCACACATCGGTAATGGAGGATTCCGTGAGCTCTGCCACCACGCTGACCACGCCTCAGGAGCAGGTCGACAGCCTCATTGTCCAGATAGCTGAGGAAAACGGCCTGGAGGTCCTAGACCAGCTCAGCCAGCTGCCAGAGGGAGCGTCTGCTGTGGGCGAGAGCTCTGTGCGCAGCCAGGAGGACCAGCTGTCCCGGAGGTTGGCTGCCCTGAGGAATTAGCACGTCCGTGGCAGCTGCTGCCTCCCTTGTCCTGTGATTGTTCTGGAGGCTTCTGCCCAACTGCTTCACTTTCTCCAACCCTTCGTAGCTGCCTGGGCTCTTTTCCAACCTGTCAGGCTGGCGCCTTAGAACTGAGCCTTAGGTTGGGCAGCGGGTCTCTGTCCTGGTATTGAATTTGCACAAGTGTGTGGTGACATATGTGCTTGTGGGCCACAGCTGGAGGATGGCAAGCTTTCTGTTGTCCTCTGCCTATGTGGAGTTGACAGGGTTTGGCCTGCAGATGTGTCTGGACTTGAGCCCAGTGCTTTGGGGCCTTGAGACTCCAGCGACTGCACACCCGCTCTGTGCTGCGGCCAGGGAGGGTGAGAACCATCGCTCCTTTGCCAGGTAACTCTTGGGAGCCTCTCCCCCTTCTGCATAGAGGAAATCCCAGTGTGTGACAGCCCTTAAGGTTCCTGTGGACTTTGTGTACCAAGGTGTCCAGTGCCACCAACACTGACCTGGGGCCTTTACAAATGGTTGCTCTCCTCCATCTTCCCAGGGCTGCGGTCCTGGTGTCTACTGCCGGCCGGCTGAGTCTGCGTGGGCTTTCTGTCTCTCAGCTCCCTTTCCCAGCCCACAGGGACAGAAGTACCATCCACTTTCAAGTCCAGCTCCTTCCTAAGAGATTCTTCCACCTTACTCTGCAGCTGCCTCTGGAAGAACTTTGGGCTGCTGGGGCTGAGCTGTCTGCTTGATGCTGACAGACTCCTAGTGTCAGCTCCCAGGCCGCCTTAGAGCTGCTCATTCCTGAATGACTGGCTCCCCTGCCCTTTTAGACAAAGGCTGCTGCTTTCAGCCTTCTCCAAGGGAGAGCCTGGCTGGCTAACAGAGGGAGCCTGAGTCAGTCACATCTGGCAGCTGGCAGCAAGCTCTTCATCCCTCCACAGTGAGGAAGCTGGCAGCGAGCAGGTAGACCTGGAGACTGCACGGCTGCTGATTGGTCTTCTATCTCCTGAAGTTTACTCATGTTCTTAAAACTCCTGGTGACTTTGTTCTTTTGCCAACGTAGAAAGCACAGTGGACGGGTTGTGTTTGTCCCAGCCCTCTCTGTAGGCTGAGCAGTGCAGCGGCGCCCACAGGTTTACACacaagtttggtttggtttcttctgTTCTGCACTTTGGAGTCCCTGGGTATTCCACATTACAAGTTGATGTTATAGGTGGGGGCTGGAATTGTTGCCCTGGATGTGGGGACCAAGGTACAATCTAACCATGGGCCCCCACAAGGCTTCCTGAAATCAAATGTTAGGTGTTGAGAGTAGCTGCAGTCTCGGGATAACTTGTGAGTTCCCTGGGTCCTGGAGGGTGCAGGGTTTGTGGAACAGTAGTAGGGATGGGGAGCTGGGCTGGGTTCATCAGAATGGGCGTGTCTGCCTTCACAGTGCTGTCCTAAGTAAATAAAGGGATTGGTGAAGAACgt