Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Sc5d
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name sterol-C5-desaturase
Also known as A830037K02|A830073K23Rik|Sc5dl
Coordinate chr9:42162888-42175607
Strand -
Gene summary Predicted to enable C-5 sterol desaturase activity. Predicted to be involved in cholesterol biosynthetic process via lathosterol. Predicted to act upstream of or within steroid biosynthetic process. Predicted to be located in intracellular membrane-bounded organelle. Predicted to be active in endoplasmic reticulum membrane. Is expressed in central nervous system; ganglia; gut; and liver lobe. Orthologous to human SC5D (sterol-C5-desaturase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sc5d

Retroname Coord Strand Genomic Region ENSG
Sc5dP1 chr6:66260426-66261842 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_172769.2
CGGGGCTCTGCTGAGCGGGCGGTGTCTCGGGCGCTCTGGCTCGTACTCTCCGCTGGCTGTAAAGCCGCGGCTGACGGAGCTGCTGGGCCTGGCAGGTTCAGTCCTCGCCCTTATCTGATGGTAGATCCTGCCTCCAAGTGACAGACACAACCATTGTTTATTGGGTCACATACCAGGGGCTGCGATGGACCTGGTTCTCAGTGCCGCCGATTACTACTTCTTCACTCCGTATGTATATCCAGCCACGTGGCCCGAGGACAACATCATCCGACAAACTATTAGCCTCCTGATTGTCACAAACCTGGGTGCTTACATTCTCTACTTCTTCTGTGCAACCCTCAGCTATTATTTTGTCTATGATCATTCCTTAATGAAACACCCACAGTTTTTAAAgAACCAAGTCTCGCGTGAGATCGTGTTCACTGTCAAGTCTTTGCCTTGGATCAGCATCCCCACCGTCTCACTGTTCCTGCTGGAGCTGAGGGGTTACAGCAAACTCTACGATGACATCGGAGACTTTCCAAATGGCTGGATTCATCTCATGGTTAGCGTCGTATCCTTCCTCTTTTTCACAGACATGTTGATCTACTGGATTCATAGGGGCCTGCACCACAGACTGGTCTACAAGCGCATACATAAACCACATCATATTTGGAAGATCCCCACGCCGTTTGCAAGTCATGCTTTTCACCCTGTGGACGGCTTCCTTCAGAGTCTGCCTTACCATATATACCCCTTTGTCTTTCCACTGCACAAGGTGGTCTACTTAGGTTTATATGTCTTGGTTAATGTCTGGACAATTTCTATTCATGATGGTGATTTTCGGGTTCCCCAGATCTTAAGGCCATTTATTAACGGGTCAGCTCACCACACAGACCACCACATGTTCTTTGACTATAACTATGGACAGTATTTCACATTGTGGGATAGAATTGGAGGCTCTTTTAAACATCCTTCCTCTTTTGAAGGGAAAGGACCACATAGTTACGTGAAGAACATGACAGAAAAAGAATCTAACAGCTTTGCAGAAAACGGCTGTAAAGGCAAAAAAGTAGGCAATGGAGAGTTTACAAAGAATAAGTAGATTATTGCCCAGTTATTaactattttaaataagaaaataatctacACAGTCAAGATACCTAGCAAATAAGTGGTGCCATTGGAATGTCAGCATTGCTTGAGTGTCATGCTGAGGGATGGTCCTGACAGTAAACAGCGGGAAGACACCGGGAGCATTGTAATCGCTTGGTTAATTGTCCGACATTGGTCCAGGAACAACTTGTCTTTTCAGCCGGCTGACCTGCAGCCTGTACAGCTCTGAAGCATCTTTAAATACGATAGAAAATAAGCTACTCAAGAAGCTGGTCTGTGTCCTTTTGCCTTAGTCCATGCATACTCATTAAGGAAAAAAAGTACCATTGTGCTAAACGCTACTGAGACTAACCAGGAAACCCTAACGATGAAGATGGTCCTGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTTGCAGGACTTCATTCAAATAGGAATATCAGTCCAAGCAAGCTGATACGTGAGTGGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGTACTTCCTATACAGAGGCACCTTACTCTCTGGGGCATTATCAgattttaataaatgaataaataaatggtattttttttaaatgtcagctCTTCCATAATTCAGTCTAGATAGGAGATTATTTAACTGAAGATCTTGGtgagtgtcatttttttttcttttttctttttttggtttttcaagacagggtttctctgtgtagccctggctgtcctggaactctgtagactgggctggcctcgaactcagagatctgcctgcccttgctgggatcagaggtgtgcaccaccactgcccagcttgaagTGTGTCATTTAAAACCACTGTTTAATAACCCTACAGACATGAATCTGGATAATGCTAGGTATAAACTTGTGGCACCCAGTGACATCTTTTTTTAATCAAGTGGACACACTTTTGATGTATTTCTCAGTTACAaagctgacttttttttaatgaagggaATAATTGCCAAGTACTTAAATCTACCTGAGGTACACTTTTAAACCTCATCTTctatttcttccctctcttctgcaaatgaacaaaacaaaacataaaggtGGTTGTTGTAAGCTAAGTATATTTGTGGAGGGAGAAGATATGTTTTTATAAAGTTATTCTAATGGCTatttgtgc