Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Topbp1
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name topoisomerase (DNA) II binding protein 1
Also known as 1110031N14Rik|2810429C13Rik|D430026L04Rik|mKIAA0259
Coordinate chr9:103182351-103227627
Strand +
Gene summary Predicted to enable identical protein binding activity. Predicted to be involved in DNA replication initiation; mitotic G2/M transition checkpoint; and response to ionizing radiation. Predicted to act upstream of or within reciprocal meiotic recombination. Located in condensed nuclear chromosome and male germ cell nucleus. Is expressed in embryo and metanephros. Orthologous to human TOPBP1 (DNA topoisomerase II binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Topbp1

Retroname Coord Strand Genomic Region ENSG
Topbp1P2 chr7:40698084-40698262 - Intragenic
ENSMUSG00000100732 UCSC
Topbp1P1 chr7:38141580-38141758 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_176979.5
CGCGCCCCCCGACTTGGTGCCCGTGGGCCCTCGGGCTCCACCTAGTTCAGCTATGTCCAGAAATGACCAAGAGCCGTTTCTTGTGAAGTTTTTAAAGTCTTCGGACAATTCAGAATGCTTTTTTAAAGCTCTTGAGtcaATAAAGGAATTACAATCAGAAGATTATCTTCAGATTATTACAGATGAGGAAGCATTGAAGATAAGAGAGAATGACAAATCGCTTTATATCTGTGACCGTTTCAGTGGCACTGTTTTTGATCACCTTAAACAGCTTGGCTGCAGGATTGTTGGTCCTCAAGTGGTCACATTTTGTATGCGCCACCAGCAATGTGTCCCAAGAGCTGAGCATCCAGTCTACAACATGATAATGTCTGACGTAACTGTATCCTGTACAAGCCTGGATAAAGACAAACGGGAAGAAGTTCATAAATACGTACAAATGATGGGTGGACGAGTATACAGAGACCTTAATGTATCAGTCACTCACCTTATTGCAGGAGAAGTTGGGAGCAAAAAGTACTTAGTTGCTGCTAATCTGAAGAAGCCTATTTTGCTACCTTCTTGGATAAAAACCCTTTGGGAGAAGTCACAAGAAAAAAAAATAACCAAGTACACTGATGTAAACATGGAAGACTTTAAGTGTCCTATTTTTCTTGGTTGCATTATCTGTGTGACTGGCTTAAATGGAATACACAGAAAGACAGTCCAGCAACTCACGGCTAAGCACGGAGGCCAGTACATGGGACAGTTGAAGATGAATGAGTGTACACACCTCATTGTGCAAGAACCAAAAGGACAAAAATACGAATGTGCCAGGAGATGGAATGTGCACTGTGTGACCCTGCAATGGTTTCATGACAGTATTGAGAAAGGCTTTTGTCAGGATGAATCTATATACAAGGCTGAAACCAGAGTAGAAGCAAAGATGGTGCCTGATACTTCAACACCCACTGCTCAGAGCAATGCTGAAAGTCACACGCTCGCAGATGTCAGCCATATATCCAACATAAATGGCAGCTGTGTAAATGAAACAATGTTTGGTTCAACTACTAGCAAACTTGAATGTTCCCTTGAAAACCTAGAAAATCTGGACATCAGTATGTTTCAAGCTCCTGAAGACTTATTAGATGGCTGTCGGATATATCTTTGTGGTTTTAGTGGCAGAAAGCTGGATAAGCTGAGAAGGCTTATTAACAGTGGAGGTGGAGTTCGATTTAATCAACTAAATGAAGATGTAACTCATGTAATTGTGGGAGATTATGATGACGACGTGAGGCAGTTCTGGAGCAAATCATCTCACAGGCCTCACGTAGTGGGAGCAAAGTGGTTGCTGGAGTGTTTTACTAAAGGATATATACTTCCTGAAGAGTCCTATATCCACACTAACTACCAGCCAGCTGGAATTGCAGTTTCCGATCAGCCTGGAAACCAGACAGCTGTCTTAGACAAGAGCGGCTCATTCTCCAAGAGCGCCCTTGTTCCTGCTGAGAGGCTTCAGCAGGCCGACGAGGATCTGCTTGCTCAGTATGGAAATGACGACTCCACGATGGttgaAGCTAAGCTATCTGAAGCTTTAGAGCCTGAAGTCGGGCCTTGCCCTGGTTCTGCTCACCGTGAGCCCTGTGATGATTCCACTCACATTTCTGTGCAAGAGGAAAACAAGTCGTCTGTCAGTCATTGCATCCTTGATGACTCTACAGTTCGTGAAGAAGGCTTATTTAGCCAGAAGAGTTTCCTTGTTTTGGGTTTTAGTgttgaaaataaatgtaatattgtAGACATCATAAGAGAGCATGCTGGCAAGATTGTGTCCCTTCCCAGCAGAATTGTTGCTGACTATGCTGTGGTTCCACTGCTGGGATGTGAGGTAGACGTGACGGTGGGAGAAGTTGTTACAAACACGTGGCTGgtTACGTGTATAGACAACCAGACATTAGTTGATCCCAAGTCGAATCCCCTCTTCACACCAGTCTCAGTAATGTCGGGAGTGACTCCTTTAGAGGACTGTGTGATTTCCTTCAGTCAGTGTGTGGGAGCAGAAAGAGATTCCTTGGTATTCTTAGCAAATCACCTTGGAGcaagTGTTCAAGAATTCTTTGTTCGCAAAGCCAATGCAAAGAAAGGCATGCTCGCCAGCACACATCTTATAGTGAAGGAACCGACTGGTTCCAAATACGAAGCTGCAAAGAAATGGAGTTTGCCGGCAGTTAACATTTCATGGCTCTTAGAAACTGCGAGAATCGGGAAGAGAGCAGATGAAAACCATTTTCTGGTTGACAACGCACCTAAACAAGAACAAGTTTTAGAAACTAAGATACCAAATGGAGTGAGTTCAAATCCAGATTTACCAGCACATCCTGACGCACACTTGGAAATTCACAGAAAAAAGGCGGTTACACCTTTGGACATGAATCGCTTTCAGAGTAGAGCCTTCCGTGCTGTCATTTCACAGCAGAGGGGGCAGGACCCCACCTTTCCACCAGTACGGCAGCCCCTTACTAAGGAGCCCTCTTTACACCTGGACACACCATCAAAGTTTCTGTCCAAGGACAAGCTTTTCAAGCCATCCTTTGATGTGACGGATGCACTTGCAGCCCTGGAAACCCCAAATGCTGCCAGCCAGAAGCGGAAACTAAGCTCACCACTCTCTGAAGTCATCGTCAGAAACCTGACAGTTGCTTTGGCAAATAGTTCCCGAAACACTGACAGTCATTCTGCCAGCCCTCAGCTGAAGGGTGCCCATTTGGAGGAGGAAGAGACTCGGAAACCACTTGACAGcgttgtggtgtgtgtgagtaagAAGCTCAGTAAGAAGCAGAGTGAGCTCAATGGGGTCGCAGCATCACTGGGAGCAGAGTACAGGTGGAGTTTCGATGAGACTGTTACTCATTTCATTTACCAGGGTCGGGCAAATGACAGTAATCGAGAATATAAATCTGCAAAGGAAAGAGGGGTGCACATCGTGTCCGAGCATTGGCTATTAGAGTGTGCTCAAGAGTATAAGCATCTTCCTGAATCTCTTTATCCACACACTTACAATCCCAAAATGAGTTTGGACATCAACACAGTGCAAGATGGGCGGCTCTGTAACAGCCGGGCACCCTTGGCAGTTTCTGCATCTAAGGATGATGGGCCAGATCATCTGTCTGTAGAAGGAAATGAGACAAACACTATGGGCACAAATGACAAAGAGTCACCTCTGttgaatgggagtggaagagatgACTGTAAAGGAGCTCTGACCCAGGCCTTGGAGATGAGAGAGAACTTCCAGAAGCAGCTGCAAGAGATCATGTCAGCCACCTGCATTGTGAAGACGCCTGCCCAGAAGACTTGCATGTCAAGAAGCAGCTGTAACAGCGCCTCTTCAACTCCTGACAGCGCTCGCTCTGTGCGGAGCGGACGAAGCCGAGTCCTGGAGGCACTCAGGCAGTCTCGGCAGGCAGTGCCTGATGTGAACACGGAGCCGTCCCAGAACGAGCAGATCATTTGGGACGACCCGACAGCAAGGGAAGAGAGAGCAAGGCTTGCCAGCAACTTACAGTGGCCCAGCGACCCCACACAGCATTCTGAGCTTCAGGTTGAGATAAAAATGCCGGATGACTCTCCCTCTCGAAAGCCTGTGTACCATTCAGAAATTGCTGAGCAGGCCTCGTGTGTTACTCAAGCCCCAGGGCACCCAGGCTCTGAAGAACCAGAGCCTCCAGTAGCAGAAAGGCCTTTGATCCCCGAGCCGCAAGCCCCCGCTGTAGCTTCCCCCCTGGCTAAGCCGCCTGTGGCCCCACAACCTGCAGACAAGATTGAAACACAGGAGGAGACGCacagaaaagttaaaaaacaGTATGTGTTCCAGATGTCGTCTCTGAATTCTCAAGAGCGGATTGATTACTGTCGCCTGATTAAAGACTTAGGTGGGTCGGTGATCGAGAAGCAGTGCTCTGACCCCAGCTGCACACACATGGTTGTGGGCTACCCACTGCGCAATGAGAAGTACTTAGCTTCTATGGCAGCTGGTAAATGGGTGCTTCATCGCTCCTACCTAGACGCTTGCAAGACAGCTGGGCGCTTTGTGCAGGAAGAAGACTACGAGTGGGGAAGTAGCTCCATACTTGATGCTCTCCCTGACGTCACTGAGCACCAGCAGAAGCTCGCACTGGCGGCAATGAGATGGAGGAAAAGAATCCAGCAAAGTCAAGAATCCGGCATTGTTGAGggAGCATTTAGTGGCTGGAAAGCTATTTTACGTGTTGATCGGCCCCGAGAAGCTGGGTTCAAACGCCTTCTTCAGGCAGGAGGAGCAAAGGTGTTATCTGGTCATCCAGAACCTTTACTTAAAGATGCTACGCATCTCTTTTGTGACTTCAATAAACTGAAACCTGATGACTGCAGAGTTTTCATCGCAGAGGCTACTGCCCAGAACATGGTCTGCTTGAAAACAGAATATATCGCTGATTATCTCATGCTGGAATCCCCTCCTTGTGCAGACAATTACCGTGTATCCGAAGCTGCTTTATTCCATAATAAGAAAGGTGGGCCTGGATTACCACAGAAGAGGAAAACTCCTGCAGAGAATGTAGTCAAACGGCCTCGAGTACACTGAAGTGAGCCATACACAACCACCCAACGAATGTTTTTGAGTTTAGTGTGCTTGCCTAAAATGTATAAAGTGCACTAGAAAATTTTCAGCTACAACCTGAACATTGCTGTGATGCATTTGTGTAGCAGTTTAAAGGCATACATCTGAAGGACTATGCTTCAGATTCTAATGATCCTGTAAACTGGATACCTTTAACCTGAATTTGAATCACTGGTTATTGACTGTTCCTAATGAGGCTGAAATAGTTTTAACAAGGAGATTTGTTTCAAAAATGTCATAGTTCATAAAAGCAAAAGTTATACATTAGGGTTATTTcatgttttcctgatttttatatatgtattcttGCCATTTAACCTCTTTAACAGCCTGAGCAGAGAGTTTAACAATGAAGCTGGGGCTCTaaacttaaaatatgtatatatgtaaatgtgtgtatgtataaacttCTATCATTTGCCAAACTTGGGCACCAAAACTTTgagataaagaataaaaaaaaatagcaacttAAA