Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Gene Name SSBP3
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name single stranded DNA binding protein 3
Also known as CSDP|SSDP|SSDP1
Coordinate chr1:54225432-54413479
Strand -
Gene summary Predicted to enable single-stranded DNA binding activity and transcription coactivator activity. Predicted to be involved in head development and positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within hematopoietic progenitor cell differentiation. Predicted to be part of protein-containing complex. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from SSBP3

Retroname Coord Strand Genomic Region ENSG
SSBP3P1 chr7:39833213-39834950 + Intergenic
 ENSG00000233225 UCSC
SSBP3P9 chr14:18644834-18646579 - Intergenic
 ENSG00000257731 UCSC
SSBP3P12 chr14:19668473-19670210 + Intergenic
 ENSG00000257751 UCSC
SSBP3P3 chr2:129992534-129994243 + Intergenic
 ENSG00000217289 UCSC
SSBP3P2 chr2:131351875-131353593 - Intergenic
 ENSG00000224425 UCSC
SSBP3P14 chr22:15571876-15573621 - Intergenic
 ENSG00000213727 UCSC

Expression

Transcript Sequences

>NM_018070.5
AGACCAgcggcggcggcggcggcggcggcggcagcggTGCTGGAGGCGCAGAgggcggcgcaggcggagccgggcgggcgcgcgagcgagcggagagcgggcggccgtgcgggcggcggcggcggCACCCCCAGGCCGAGCCGGCGCGGAAGGAGTTCCAGGGCGATGGGGCCGCGGCCGGGGCTGACGCTTTGACAGCTGGAAAGAGCGCGGAGCCAGCGCCTgggggggagggaggggagcgcggcgaggagagcgccagcgagcgagagagcgagcgagcgccggggagggggccgggagcgagggGCAGCTCGGGAGAGCCGGAGCGGTAGCGGCGGCGGCGGCGGCGGCGGCGAGGCTCGGCGCCCTCTTCCCTGCAAACCATGTTTGCCAAAGGCAAAGGCTCGGCGGTGCCCTCGGATGGGCAGGCTCGGGAAAAGTTAGCTTTATACGTCTACGAATATTTACTGCACGTAGGAGCACAGAAATCTGCACAGACCTTCTTATCGGAGATTCGATGGGAAAAAAACATCACGTTGGGAGAACCGCCTGGGTTTTTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTACTGTGCAGCTCCTGAAAGGAGAGACACTTGTGAACATTCAAGTGAAGCAAAAGCCTTTCATGATTATAGTGCAGCAGCTGCCCCGAGCCCCGTGCTTGGCAACATTCCCCCCAACGATGGGATGCCGGGAGGCCCCATCCCGCCAGGTTTCTTTCAGGGTCCTCCGGGGTCACAGCCCTCGCCGCACGCACAGCCTCCACCTCACAATCCTAGCAGCATGATGGGACCCCACAGTCAGCCTCCGGGAGGAGTTCCTGGGACACAGCCATTGCTGCCCAATTCTATGGATCCCACACGACAACAAGGCCACCCCAACATGGGAGGATCAATGCAGAGAATGAACCCTCCCCGAGGCATGGGGCCCATGGGTCCCGGCCCACAGAATTACGGCAGCGGCATGAGACCACCACCCAACTCCCTCGGCCCCGCCATGCCCGGGATTAACATGGGCCCGGGAGCTGGCAGACCCTGGCCCAATCCTAACAGTGCTAACTCAATTCCATACTCCTCCTCATCACCTGGTACCTATGTGGGACCCCCTGGTGGTGGCGGTCCTCCAGGAACACCCATTATGCCCAGTCCCGCAGATTCAACAAATTCCAGTGACAACATCTACACAATGATTAATCCAGTGCCGCCTGGAGGCAGCCGGTCCAACTTCCCGATGGGTCCCGGCTCGGACGGTCCGATGGGCGGCATGGGTGGCATGGAGCCACACCACATGAATGGATCATTAGGGTCAGGCGACATAGACGGACTTCCAAAAAATTCTCCTAACAACATAAGTGGCATTAGCAATCCTCCAGGCACCCCTCGAGATGACGGCGAGCTAGGAGGGAACTTCCTCCACTCCTTTCAGAACGACAATTATTCTCCAAGCATGACGATGAGTGTGTGATCCCCCCTTCTCCGAGACGCTGAGAGAGCAGGCATTGCAGGCGGGAAGATGCCAGAAATTATGCAAGAAGTGAGGTGTCATTATCCAGGAGCTGGTGGGGAGGGCATCTCCCTGCTCCCCTCAACCCCCTCCCACCCCATCCACGCCCCCTACCTTTCCCAATTTTAGTTTCATGCAATAAAAAGGCCAAACTTTTTATTCCATAAAACAAGAAGGACAAAACTCTCAAAAATGTATTTCAAGTCAGTGACCAGAAAAATCCCACCCCTTGCCCTTTCCCCAAAGGACCTTTTCTGTACATGACACTTTTTTGTTGTTTTTTGTTTGGGGTTTTACCATTGTTGGGATTTTTTTATTTGTTTTCAGGGGGGTTTTTTGGGGGAAAATTTTTTTAAATGGAAGCTTCTAGCAAGCCCCCCACCCCAATCAACCTCTATGCTTTCTTCTTaaaaaaaaaaaaaaaggaaaaaggaaaaaaaaaaaaggaaaaCCAGAAGCCCTGCTGTCTGTCTGTGCCCAAGCCCTTCCACCAGAAAAGCTAGTCTAGGTGTGAGAGCCCACATTGTCTGTAGCCATCAAAAATAATAATAATAAACTGGACAGTTTACAATCGTTGGTTTCTTTCAAAAGGCCTTTTTTGGAAAGAAGAAAAGGCAGTCACCGTTTTCCACTTGGGGTTTTGGTTTGTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTCATCCTGTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCCTCCTCCTCTCCTGGACCTCCCTTCCGTCCTGGCCTCCCTGCCTCTCCAGCCCCTCCTCTGCCCCCACCCCAGTCTTCCCAGTGAGAATCCTGCCAGCTGGGTGGTGGCCTGGCGCAGAGTGGGAGAGGCTGCCACTGACAGGATGGCTATGACCTGGGACATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCATCGTGTGCACCGGCTTGGGGGGCTGGAGTTCCGGTTTTCTTTGTTTTTTCTCTTTATtcgtcctttctcaaagatgggatactgatcagaattgctctgtatatgcttgggactggatggaaagacTTTGGAGCAGCTGTGGGGGGTGGGGGGACACCGACAACCAAACAGACGTGCTGGCTCCAGTCCTGTTTTTACTTTCAAAAACCAACAAGCCCGACAGTGGAGCCTGTCCCCTCCCGGGAGGGTGCTCATGGCCCCACTCACCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCTTTGTACATTGACATGCCCTTCTCCTTCCTCCCTCCCCTGTAGCTGGTCTTTGTTTTACTCCCTCCCTTTCTGATCCATGTATATCATATTATGTGAGATATCATCTGCCTGAAAAAAGACTTTGTGCGGATTATTGGGAACATTGTAGCTGTTTCTGTGTTTTTTCTTACCTTGTAGTCTGGTTCTGAATTAAGAGAGGAAAAAAAAGTAATTATGATACATTGTAGTTTGTGTACGATATATGTTGATAACGTTTTATTAAAGGGACATCTTTTTTCCGCA
>NM_145716.4
AGACCAgcggcggcggcggcggcggcggcggcagcggTGCTGGAGGCGCAGAgggcggcgcaggcggagccgggcgggcgcgcgagcgagcggagagcgggcggccgtgcgggcggcggcggcggCACCCCCAGGCCGAGCCGGCGCGGAAGGAGTTCCAGGGCGATGGGGCCGCGGCCGGGGCTGACGCTTTGACAGCTGGAAAGAGCGCGGAGCCAGCGCCTgggggggagggaggggagcgcggcgaggagagcgccagcgagcgagagagcgagcgagcgccggggagggggccgggagcgagggGCAGCTCGGGAGAGCCGGAGCGGTAGCGGCGGCGGCGGCGGCGGCGGCGAGGCTCGGCGCCCTCTTCCCTGCAAACCATGTTTGCCAAAGGCAAAGGCTCGGCGGTGCCCTCGGATGGGCAGGCTCGGGAAAAGTTAGCTTTATACGTCTACGAATATTTACTGCACGTAGGAGCACAGAAATCTGCACAGACCTTCTTATCGGAGATTCGATGGGAAAAAAACATCACGTTGGGAGAACCGCCTGGGTTTTTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTACTGTGCAGCTCCTGAAAGGAGAGACACTTGTGAACATTCAAGTGAAGCAAAAGCCTTTCATGATTATAGTGCAGCAGCTGCCCCGAGCCCCGTGCTTGGCAACATTCCCCCCAACGATGGGATGCCGGGAGGCCCCATCCCGCCAGGTTTCTTTCAGGGTCCTCCGGGGTCACAGCCCTCGCCGCACGCACAGCCTCCACCTCACAATCCTAGCAGCATGATGGGACCCCACAGTCAGCCTTTTATGTCACCGCGATACGCAGGCGGCCCCAGGCCCCCGATCAGAATGGGAAACCAGCCTCCGGGAGGAGTTCCTGGGACACAGCCATTGCTGCCCAATTCTATGGATCCCACACGACAACAAGGCCACCCCAACATGGGAGGATCAATGCAGAGAATGAACCCTCCCCGAGGCATGGGGCCCATGGGTCCCGGCCCACAGAATTACGGCAGCGGCATGAGACCACCACCCAACTCCCTCGGCCCCGCCATGCCCGGGATTAACATGGGCCCGGGAGCTGGCAGACCCTGGCCCAATCCTAACAGTGCTAACTCAATTCCATACTCCTCCTCATCACCTGGTACCTATGTGGGACCCCCTGGTGGTGGCGGTCCTCCAGGAACACCCATTATGCCCAGTCCCGCAGATTCAACAAATTCCAGTGACAACATCTACACAATGATTAATCCAGTGCCGCCTGGAGGCAGCCGGTCCAACTTCCCGATGGGTCCCGGCTCGGACGGTCCGATGGGCGGCATGGGTGGCATGGAGCCACACCACATGAATGGATCATTAGGGTCAGGCGACATAGACGGACTTCCAAAAAATTCTCCTAACAACATAAGTGGCATTAGCAATCCTCCAGGCACCCCTCGAGATGACGGCGAGCTAGGAGGGAACTTCCTCCACTCCTTTCAGAACGACAATTATTCTCCAAGCATGACGATGAGTGTGTGATCCCCCCTTCTCCGAGACGCTGAGAGAGCAGGCATTGCAGGCGGGAAGATGCCAGAAATTATGCAAGAAGTGAGGTGTCATTATCCAGGAGCTGGTGGGGAGGGCATCTCCCTGCTCCCCTCAACCCCCTCCCACCCCATCCACGCCCCCTACCTTTCCCAATTTTAGTTTCATGCAATAAAAAGGCCAAACTTTTTATTCCATAAAACAAGAAGGACAAAACTCTCAAAAATGTATTTCAAGTCAGTGACCAGAAAAATCCCACCCCTTGCCCTTTCCCCAAAGGACCTTTTCTGTACATGACACTTTTTTGTTGTTTTTTGTTTGGGGTTTTACCATTGTTGGGATTTTTTTATTTGTTTTCAGGGGGGTTTTTTGGGGGAAAATTTTTTTAAATGGAAGCTTCTAGCAAGCCCCCCACCCCAATCAACCTCTATGCTTTCTTCTTaaaaaaaaaaaaaaaggaaaaaggaaaaaaaaaaaaggaaaaCCAGAAGCCCTGCTGTCTGTCTGTGCCCAAGCCCTTCCACCAGAAAAGCTAGTCTAGGTGTGAGAGCCCACATTGTCTGTAGCCATCAAAAATAATAATAATAAACTGGACAGTTTACAATCGTTGGTTTCTTTCAAAAGGCCTTTTTTGGAAAGAAGAAAAGGCAGTCACCGTTTTCCACTTGGGGTTTTGGTTTGTGCAACAGGCAGGGGAGGAGTGGGGACGCGTTTGTTCTAGCTTGATTTCCATGGCAACAGCAGCGGCACGCTTGGACCCCAGAACCCAGCACCCTCATCCTGTGGCCAGAGGGGCCGGACCACTGACCCCTTTCAGGATTCCACCACAGCCCAGACCGTCACCGTGACCCGGTGGCATGCACTGTTCCCAGGACACCCTCCTCCTCTCCTGGACCTCCCTTCCGTCCTGGCCTCCCTGCCTCTCCAGCCCCTCCTCTGCCCCCACCCCAGTCTTCCCAGTGAGAATCCTGCCAGCTGGGTGGTGGCCTGGCGCAGAGTGGGAGAGGCTGCCACTGACAGGATGGCTATGACCTGGGACATGGAAACAGTGACCTCCGCGTTCTGGTCCCGAGATCCTCGCATCAGCGTCATCGTGTGCACCGGCTTGGGGGGCTGGAGTTCCGGTTTTCTTTGTTTTTTCTCTTTATtcgtcctttctcaaagatgggatactgatcagaattgctctgtatatgcttgggactggatggaaagacTTTGGAGCAGCTGTGGGGGGTGGGGGGACACCGACAACCAAACAGACGTGCTGGCTCCAGTCCTGTTTTTACTTTCAAAAACCAACAAGCCCGACAGTGGAGCCTGTCCCCTCCCGGGAGGGTGCTCATGGCCCCACTCACCTCATCACCCCACGGAAACCTTTGTGTCTTGCCCTGGAAGACACCCGAATTCTTTGTACATTGACATGCCCTTCTCCTTCCTCCCTCCCCTGTAGCTGGTCTTTGTTTTACTCCCTCCCTTTCTGATCCATGTATATCATATTATGTGAGATATCATCTGCCTGAAAAAAGACTTTGTGCGGATTATTGGGAACATTGTAGCTGTTTCTGTGTTTTTTCTTACCTTGTAGTCTGGTTCTGAATTAAGAGAGGAAAAAAAAGTAATTATGATACATTGTAGTTTGTGTACGATATATGTTGATAACGTTTTATTAAAGGGACATCTTTTTTCCGCA