Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Tmtc3
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name transmembrane and tetratricopeptide repeat containing 3
Also known as 9130014E20Rik|B130008E12Rik|mSmile
Coordinate chr10:100279764-100323230
Strand -
Gene summary Predicted to enable mannosyltransferase activity. Acts upstream of or within several processes, including lung development; muscle cell development; and post-embryonic development. Predicted to be located in endoplasmic reticulum. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; respiratory system; and trunk mesenchyme. Human ortholog(s) of this gene implicated in lissencephaly 8. Orthologous to human TMTC3 (transmembrane O-mannosyltransferase targeting cadherins 3). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tmtc3

Retroname Coord Strand Genomic Region ENSG
Tmtc3P1 chrX:153751133-153757929 - Intergenic
 ENSMUSG00000083554 UCSC

Expression

Transcript Sequences

>NM_001110013.1
GCGGGAGTCTGCGGCCGCCCtggaagagctgggggaaggCTCGGGAGGCGGGAGGAGCGGCTGCTAAGGTGCGGCCGCCCCGGAGTCCGAGCGTGGCAGGCTATGACTGTGTTTTCTGCGGAGTCCTTCTCCGGTCCACCATCCCAGAAGCTTTCCTGAACCGTCTCCTGGCGGAGCCGCCCTCAGTTTGAGGGTGATCGATGCTTGAAGGGAAGATGGCTGATATTAACTTCAAAGAAGTGACTTTAATAGTCAGCGTGGTTGCCGCCTGCTACTGGAACAGCCTGTTCTGTGGGTTTGTTTTTGATGATGTTTCAGCAATATTGGATAATAAAGACCTGCATCCATCTACacctttaaaaactttatttcagaaTGACTTCTGGGGAACTCCTATGTCTGAGgaGAGAAGCCACAAGTCATACAGGCCCTTAACGGTGTTGACATTTCGCTTAAATTATCTCCTCAGTGAGCTGAAACCCATGTCTTACCACCTCCTGAACACAGTGTTCCACGCTGTCGTCAGCGTGATCTTCCTTAAGGTCTGCAGACTCTTTCTGGATAAGAGGAGCAGCATGATTGCGGCTCTGCTCTTCGCAGTGCACCCAATCCATACCGAGGCAGTCACAGGTGTTGTAGGAAGAGCGGAACTCTTATCATCTGTCTTTTTCCTAGCTGCCTTTCTCTCGTATACTAAGTCAAAAGGACCAGATAATTCCATAGTGTGGACCCCGATTGTATTAACCGTGTTTTTAGTGGCTGTTGCAACATTGTGTAAGGAACAAGGAATAACGGTTGTCGGAATTTGTTGTGTATATGAAGTATTTGTGGCCCAAGGGTACACCTTGCCGATGTTATGCACCGTTGCCGGGCAGTTTCTGCGCGGGAAGGGCAGCATTCCGTTATCTATGCTGCAGACACTGGTGAAGCTCATTGTCCTGATGCTCAGTACCTTGCTACTCGTTGTGGTCAGAGTCCAAGTTATTCAGTCACAACTTCCAGTGTTTACCAGGTTTGATAATCCAGCTGCTGTAAGCCCAACCCCGACACGACAGCTGACTTTTAACTATCTCCTTCCTGTGAATGCCTGGCTTCTGCTGAATCCTTCGGAGCTCTGCTGTGATTGGACCATGGGGACAATACCACTGATAGAATCATTTCTAGATGTTCGAAATCTCGccacttttgctttcttttgctttctgggGGCTTTGGGAATATTCAGTCTCAGATACCCTGGTGACTCCTCAAAGACTGTCCTAATGGCGCTTTGTTTAATGGCGTTACCATTTATTCCCGCATCAAACCTGTTCTTTCCTGTTGGATTTGTGGTTGCTGAGCGAGTACTATATGTTCCTAGCATGGGGTTCTGTATTTTAGTAGCCCATGGATGGCAAAAAATTTCAAACAAAAGTGTGCTGAAAAAGCTCTCGTGGGTTTGTCTGTCCATGGTGATACTAACCCATGCCTTGAAAACACTTCATAGAAATTGGGACTGGGAGTCAGAATATACATTGTTTATGTCAGCCCTAAAGGTGAATAAAAACAATGCCAAATTATGGAATAATGTGGGTCATGCTCTGGAGAATGAGAAGAACTTTGAGAAAGCTTTGAAATACTTCTTGCAGGCTACCCATGTTCAGCCAGatgaCATCGGTGCCCACATGAATGTAGGAAGAACTTATAAAAACTTAAACAGAACTAGAGAAGCTGAAGCGTCTTACATGCTGGCTAAATCACTGATGCCTCAGATTATCCCTGGTAAAAAATATGCAGCCAGAATTGCCCCTAATCACCTAAACGTTTATATCAATCTGGCCAACCTTATTCGAGCAAATGAGTCCCGCCTGGAGGAAGCGGACCAGCTGTACCGACAGGCCATCAGCATGAGGCCAGACTTCAAACAGGCTTACATTAGCAGGGGAGagttgcttttaaaaatgaataagccTCTCAAAGCAAAGGAAGCATAtcttaaagcactagagctggacaGAAATAATGCAGATCTCTGGTACAACTTGGCAATTGTTTATATTGAACttaaagaaccaaatgaagctcTGAAGAACTTTAATCGAGCTTTGGAACTGAACCCTAAACATAAGCTAGCACTGTTCAATTCTGCTATTTTAATGCAGGAATCAGgTGAAGTTAAACTCAGACCTGAAGCTAGAAAACGGCTTCTAAATTATGTAAATGAAGAGCCACAGGATGCTAATGGCTATTTCAATTTGGGGATGCTCGCCATGGATGACAAAAAGGATTCAGAAGCTGAGTCTTGGATGAAGAAAGCTATCAAATTACAACCTGACTTCAGAAGCGCTTTGTTTAACCTGGCACTCCTGTATTCGCAGACTGCTAAGGAGTTAAAGGCATTGCCAATTTTAGAAGAGCTGCTTAAATACTATCCTGACCATACCAAGGGTCTCATTTTAAAAGGAGACATTCTGATGAACCAAAAGAAGGATATACCTGGAGCTAAAAAGTGTTTTGAAAAGATCCTGGAAATGGATCCAAGCAATGTGCAGGGGAAGCACAACCTGTGTGTTGTGTACTTTGAAGAGAAGGAGTTACTAAAAGCTGAGAGGTGTCTTGTGGAAACATTGGCATTAGCACCTCATGAGGAGTATATTCAACGCCATTTGAGTATAGTCAGGGATAGAATCTCCTCTTCTGGTATTGTGGAGCAGCCACTGGCCCCAGCTGATAAGACTCCAggtacagaggagagagaggaaatccCTTCTGAGGATGTAAAAGAAATCAGCAGTGAATCCAGACCACcacaaatcttaaaaacaaacaataacagaaACTCTAAATCCAACAAGCAATCAACAGAAAATGCAGACCAAGATGCCCcccataaaacaacaaaagacatcAAAGAAATTGAGAAGAAAAGAGTTGCTGCTTTGAAAAGGCTAGAAGAGATTGAACGTATTTTAAATGGAGAATAATGCTAATTCTGCATCATGTAACAATGTTTGCAAGACCTTCAGTCTATATCATGCGTTTGCTTGTTCTGGAGACCGAAAAATGTCAAGAATATATACTGGTTTTTCAGAAACTGTGTAAGGTCCTCTCTATAGGATCAAAATGAGAGTTTCATTGAAGACCTACCTGTCCCaggatatatattttataagcTAGGGCACAAATTTTAATTTGGGTGACTCAAAGAGAAATCACAAATTTCAGGTCACAATTTGAAACTTTtattacagaaagaaaaaggtgTGTGTTTAATATACAAAGAAAAGGGTGGGGAGTACTGGTAAATCTTTCTACTAATCTGATTGAAAAATACGGGGTGTCAAAGATGAACCCTTGGAGATAAGTCCGAATTGTACTGGGCTTTGTGAATTCCCATTTATTaactctttttcatttttctttacctcTTTGGATCTAGAAATGGACTGGTACTCATGAAAGacattctcttttcttcagtaatTCTTCTCATAAGCCAAGCAACATTGTATTGCAAATGTAtactgttttctttctgtgttctttcaTTGGGATTAGAAGGAATGGTAGGGAAAAAAAACATGATAAAGTATATCATGCATCACAGAGATGACATGTTAGCTTAGGAATGCATTTGTCCTGCACTCTAAACTGTAAAGTAGGGaaagtgttacacacacacactcctagtgGTGCTCACTAATACTCTATTCTCTTTCACACTGAGAGTGCTCTGACATAAGCTACATTACCATGACTACTCATGACACTTGCTCCCCAAAGGGTTCTGCTTCTGGCTTTAAGCTTTAGAGTAATTAGAGTAATCTCCTCCATCTTATTCTCTCTGGTCTTCAGTTAAAATCAATTTTCTGTTTCCAAACTAATACCTTCGCCATTCTTACCTACCTAAGCCACTACACTCAGTTTTGCTTAACTGAAGGCAACACAATGTGACATTTACTTTTAAACACTAGATTCCTCTTatggtatatattttattaagtatttattttaactACTGATCTTTCATAAAAATTTTCAACGTTTAGTTTAAATTGTTAGTTCCCTTGAGTTAACTAATCTCTAATTATATCTTAGAAACCATACTTCCGAAATGTTTTCTAAGAAACTTTTTATAAATAGGTCACAAGAAACATGTTCTGCATTAAAGACCCATTCCTTTTAGtttcccagaggacctgacatagatttctttctttctttttaaggtaATTTAACTCTAGCACTAAAGCCAGTGGGTGTTAGTTCTCGACCCAGGAGATTTTGGTAACCATCAAAGCAGTATCTTGTTTCAGTTTTTAGAGTGTATCTTTGTGACTTCAGATATGGAGTGGAGAATACCTCATGTACTATAACTTGAAGATGAAGTTACTAttctctctgtatatctctggaAAAGTTTTTGCTGATAATCACTACAATGAAAATTCTAAGTGGAGGACAGCTCAGTACATAAAGTCAAAGGAAACCTTTTATGAtaacaaacataataaaagtttGAAGACTATTTTAGTAAATTTATATAGCTAGTCAAGTGATTAAGATAAATATTAATATCCAATAGTTTTTATAGAAAAACATCTTTTATTAGCACTCATAATAATGTCTGTCACAAAGAAAGTACTCATACttgaatttaatttatttaaaacaaatccaTTTTGAATAGCAATTATTAATTATTACCAATCAATGATACCCAACCTCATTTCATACTAGAATCCTGTGGGAGCTTTTCTGAAATTGAATCATGCTTCAGTCTTTCCCAAAATCTCTTTGAGTGATTCTCATCTATAGTTAGAGTTCAGGGCTACTGCTCTAAATTAGTTCAGAaaaggtccttttttttttctcctgtgttaAATTTGTAAATTAGTAATGCAACCCAATTAAGTTTTGATGGCTTAAATCCCACTAAGGAATATATtctattgaaaatataaatagtaAATTCTATCAAACTTGGTTATGGTCAAATTAATATTTAAGTCCGTGAAATTTTATTGAAACTATTCAGATGAGAAGATACAATAAATATCGCTCCACCCCCAGCTGCCTCAATGCTGTCATCTTGAAGACATGAGAATGTAAACATTTTAAGCCCAGTTTACTATCTTATGGTTTAGCACTTTGGATATCTCAattttaaaagcacacacacacacacacacacacacgacatatcACAGGATTGTGTGCAGATATAAAAGGATATAGCTTAATTTTCAACATTTTACAAATCTACTTGTCATAAGTTCTAGCAAAGCTTTGACAATCTTATGTTTCTCCTTCACCACTCGAGTTCAATTCTAAATTGCTACTATAAAAAACTATAGTTTCcctattaacatttaaaattggaaGTTTTCTAATTCTTCTAGTGACAAGCCCCACTCACCAACCCTCCTCTTCCAGGTTAGGCCTTATAATGATGCTCAAACAGGTCTGAACTCAAAGGCTCCAGTGATCCTGTTGCAGTTCCCTCCCTGTGTGCCTGGGAAGACTGGCATGTGCATCCTTGCCCAGTCCCAGTGTGATTATCTGACGTCAGTGACGTTGACAATAAGATAACTAGTTATATCACTTTGTTTAACGTTTCGTTTATACTCTTAGGTATTTAGTGTGTGAATTACACAATTCTAATAAAACATCATGCCTTTCTTTACATCTCAGTTTTCAACTTCATGTTATAGAATGCTTCAAAGATGCTTTAATGAAAATTATTAAGAATATATAGATTTGTATGTCAATTTATACTTCAAAATCCATATATttgtcatatttatttttttatttgcatggccaaatgatatttaaaatgagcccccccccccaaatatctGGTAACTGTTAAAACTCTTGTCACTTATCCATATTAAGGGTTCGTTAAAAAGTAGTTAAAATTGTATGCATTTTTATATTACTATGATCTTTGTGTGTATCACATTTCTAAATATTCATTAttaaattgttactttttaaaactttca