Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Banf1
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name BAF nuclear assembly factor 1
Also known as Baf|Bcrp1|L2bp1/Baf
Coordinate chr19:5414661-5416904
Strand -
Gene summary Enables DNA binding activity. Acts upstream of or within DNA integration. Predicted to be located in condensed chromosome; cytosol; and nucleus. Predicted to be active in nucleoplasm. Human ortholog(s) of this gene implicated in progeria. Orthologous to human BANF1 (BAF nuclear assembly factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Banf1

Retroname Coord Strand Genomic Region ENSG
Banf1P1 chr11:82616046-82616282 + Intragenic
ENSMUSG00000083203 UCSC
Banf1P2 chr13:14215942-14216105 + Intergenic
ENSMUSG00000113819 UCSC
Banf1P3 chrX:111211854-111212520 + Intergenic
ENSMUSG00000082669 UCSC

Expression

Transcript Sequences

>NM_011793.3
AAAACGCATTCTCCTCGGAGGTCTCGATCCCACAGACCGGAAGGGCCGCTGGAGAAACAAAAGCCATCGAAAGCCGGATGGCTTCTTGAGAGGAACCGGAAAACAGCGACCCCCGTGGGCGCCGCGGCTGGCGATTGCGCGTCAACTCTATGGCTCCGGGTAGCTAGACCTGCCCAGTTTGGGGATTAGTTTTGAAGGTCGCGCATAAAACGACCCGGAAGCGGAAGTCGAGGAACCGTCTCGTAGCTTGAGGTCTGGGCGGGAGCGGCCGAGTGGCGCGAGGAGCCGTTACCAGAGCCGGAGCCTCCGGTTAAGCCTGATCACGATGACAACCTCCCAAAAGCACCGAGACTTCGTGGCAGAGCCCATGGGGGAAAAGCCAGTGGGGAGCCTGGCCGGGATTGGTGACGTCCTGAGCAAGAGGCTGGAGGAAAGGGGCTTTGACAAGGCTTATGTGGTCCTTGGCCAGTTTCTGGTGCTAAAGAAAGATGAAGACCTCTTCCGAGAATGGCTGAAGGATACATGTGGTGCCAATGCCAAGCAGTCCCGGGACTGCTTTGGGTGCCTTCGAGAATGGTGTGATGCCTTCTTGTAGTGTTCTCTGGGGATCCCTCATACCCCAGCCACAGCACAGTTTCCAGAGTCTGCAGCAGGGCAGGGCTCCTCCCTGTCCTCCATAAAGGAAAAGATGGCTGTTGTCACCCTCACCTCCTATGTACTCCAGGGTCTATGGGGAGTTCTCTCCCCTCAGCGTTTCAATCTTTCTGGGATCGTTTCCCTTGCATGCCTTTCCCTTCCACCTCCCCCTGCAGTTCCGTGGCAGCAGTTACCAACTTTCCTGAATGGATTCCTGGCCCCCTTCTCCCTCACTATCTGTTGGATGCCCTTTggctcctttcctttttttggcAAAAACAGTCACTGTCcttataaaagatttttaaattaataaaatcagtggCCTTCATACTTGG