Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ldhb
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name lactate dehydrogenase B
Also known as Ldh2
Coordinate chr4:176701980-176719999
Strand -
Gene summary This gene encodes the B subunit of lactate dehydrogenase enzyme, which catalyzes the interconversion of pyruvate and lactate with concomitant interconversion of NADH and NAD+ in a post-glycolysis process. Alternatively spliced transcript variants have also been found for this gene. Recent studies have shown that a C-terminally extended isoform is produced by use of an alternative in-frame translation termination codon via a stop codon readthrough mechanism, and that this isoform is localized in the peroxisomes. Pseudogenes have been identified on chromosomes X and 9. [provided by RefSeq, Feb 2016]

Retrocopy(s) from Ldhb

Retroname Coord Strand Genomic Region ENSG
LdhbP1 chrX:89121443-89122500 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_012595.2
CAGGGCGGCAGCCccgcctcctcctcctcctcttcTTGTAGAGCCAGAGTCGGCTGTCCGCAGAGCAGCCTGCTGACTTTGCAGTGGTTCCCCTGCCTCAGCGCGCCGCAGAGCCTCCTCTTGTCTGGACAAGATGGCAACCCTTAAGGAAAAGCTCATTGCGCCAGTCGCAGACGACGAGACTGCCGTCCCGAACAACAAGATTACTGTAGTAGGCGTTGGACAAGTTGGAATGGCTTGTGCTATCAGCATTCTGGGGAAGTCTCTGGCTGATGAGCTTGCCCTGGTGGATGTCTTGGAAGACAAGCTCAAAGGAGAAATGATGGATCTGCAGCACGGGAGCTTATTTCTCCAGACTCCGAAAATCGTGGCTGATAAAGATTACTCCGTGACAGCCAATTCTAAGATTGTGGTGGTGACCGCGGGAGTCCGCCAGCAGGAGGGGGAGAGTCGGCTCAACCTGGTGCAGAGAAACGTCAATGTATTCAAGTTCATTATTCCTCAGATCGTCAAGTACAGCCCCGACTGCACCATCATCGTGGTTTCCAACCCAGTGGATATTCTTACCTATGTCACCTGGAAGCTGAGCGGGCTACCTAAGCACCGCGTGATTGGAAGTGGATGCAATCTGGATTCTGCTCGGTTTCGTTACCTCATGGCCGAAAAGCTTGGTATTCATCCCAGCAGCTGCCACGGCTGGATCCTGGGCGAGCACGGGGACTCCAGTGTGGCAGTGTGGAGCGGGGTGAATGTGGCAGGAGTCTCCCTCCAGGAACTGAACCCAGAGATGGGAACGGACAATGACAGCGAGAACTGGAAGGAGGTGCATAAGATGGTGGTGGACAGTGCCTATGAAGTCATCAAGCTAAAAGGCTACACCAACTGGGCCATCGGCCTAAGTGTGGCTGACCTCATCGAATCCATGCTGAAAAACCTCTCTCGGATTCACCCCGTGTCTACAATGGTGAAGGGAATGTACGGCATCGAGAACGAAGTCTTCCTCAGTCTCCCGTGCATCCTTAATGCTCGGGGACTGACCAGCGTCATCAACCAGAAGCTGAAGGACGATGAGGTCGCTCAGCTCAGGAAGAGTGCGGACACCCTGTGGGATATCCAGAAAGACCTCAAGGACCTGTGACTGCCAGGCGCCAGGCTGTAGAAATCCAAACCTCCAATGTGACTAAGTGAACCTTTAGTCTTCGGCCTTGTACGTAGGTCACAGTTTGCTTCTTCCCTAACATGTGATAATGAGCTCACAGATCAAAACCAGGAGTGTTTGATGTTTGCACTAGGAGCTCCTGAACAAATAAAGTTTAGCAATTGCAGCATA