Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Mt1
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name metallothionein 1
Also known as Mt|Mt1a
Coordinate chr19:11301991-11303007
Strand -
Gene summary Predicted to enable copper ion binding activity and zinc ion binding activity. Involved in response to cadmium ion and response to zinc ion. Predicted to be located in cytosol and lysosome. Predicted to be active in cytoplasm and nucleus. Biomarker of kidney failure; median neuropathy; and transient cerebral ischemia. Orthologous to human MT1A (metallothionein 1A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Mt1

Retroname Coord Strand Genomic Region ENSG
Mt1P1 chr1:197962697-197963062 + Intergenic
N/A UCSC
Mt1P2 chr6:109044242-109044416 + Intergenic
N/A UCSC
Mt1P3 chr17:78793335-78793724 + Intragenic
N/A UCSC
Mt1P4 chrX:35783215-35783595 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_138826.4
TCCCGACTTCAGCAGCCTGACTGCCTTCTTGTCGCTTACACCGTTGCTCCAGATTCACCAGATCTCGGAATGGACCCCAACTGCTCCTGCTCCACCGGCGgctcctgcacctgctccagctcctgcggctgcAAGAACTGCAAATGCACCTCCTGCAAGAAGAGCTGCTGCTCCTGCTGCCCCGTGGGCTGCTCCAAATGTGCCCAGGGCTGTGTCTGCAAAGGTGCCTCGGACAAGTGCACGTGCTGTGCCTGAAGTGACGAACAGTGCTGCTGCCCTCAGGTGTAAATAATTTCCGGACCAACTCAGAGTCTTGCCGTACACCTCCACCCAGTTTACTAAACCCCGTTTTCTACCGAGCATGTGAATAATAAAAGCCTGTTTATTCT