Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Scaf8
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name SR-related CTD-associated factor 8
Also known as Rbm16
Coordinate chr1:44017801-44120619
Strand +
Gene summary Enables RNA polymerase binding activity and protein domain specific binding activity. Involved in mRNA processing and transcription by RNA polymerase II. Located in nuclear matrix. Orthologous to human SCAF8 (SR-related CTD associated factor 8). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Scaf8

Retroname Coord Strand Genomic Region ENSG
Scaf8P1 chrX:125856273-125857350 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_139094.1
CCCGTGggaggaagaggaaggaggagaagggggtggagagtggagggggCCGAAGCTTGAGTGTGGAGGCCGCTTCCGAGCGGGGCGGAGAAGCAGAGAAGgcgccgcgccagcccctcccccgccgccgacccgccccggcggcctcggtcctgctcgctgcgcccgccccgcGGCCATGCCGGGACCTCACGGGCGCTGAGGAGCGTCTCCAGCTAGCCGTGCTCCGCGGCCTCCTGGGCCCGTCGCCCGCCCTTCCGCACGCAACGCGCCCAGCCGCCGCCTCTTCCTTCGCCGGGCCCCGGGCCTCTGCGCAGACAACATGGAGGCCGTGAAGACCTTCAACAGCGAGTTGTATTCGCTGAATGACTATAAGCCACCCATTTCTAAAGCAAAAATGACCCAGATTACAAAGGCAGCCATCAAAGCTATTAAGTTCTATAAACATGTGGTACAGAGCGTTGAGAAATTCATTCAGAAATGTAAACCAGAATACAAGGTACCCGGACTGTATGTTATTGACTCCATTGTGCGACAATCCCGGCATCAGTTTGGTCAAGAAAAGGATGTGTTTGCACCCAGATTTAGTAATAACATCATTAGCACTTTCCAGAATTTATATCGGTGCCCGGGGGATGACAAGAGTAAAATAGTGAGAGTATTAAACTTATGGCAGAAGAATAATGTTTTTAAGAGCGAGATTATCCAGCCTCTCCTGGATATGGCGGCAGGGATTCCTCCCCCAGTTGTCACCCCGGTTTTGGCCAGCACCACTGCAGCCATGAGCAACACTCCAGGAACACCTGTGACACCTGTTACTCCAGCCAATGTGGTTCAAGGCCTACCTGATCCATGGGTATCGCAGATAACAAACACAGACACACTGGCAGCTGTTGCCCAGATCCTACAAAGTCCTCAAGGTCAACAGCTTCAGCAACTAATACAGACCTTACAGATACAACAGCAGAAGCCCCAGCCCTCTATCCTTCAGGCTTTGGATGCTGGCCTTGTGGTTCAGTTGCAGGCACTCACTGCACAGCTTACAGCTGCAGCTGCTGCAGCCAACACACTTACTCCCTTGGACCAGGGAGTCTCTTTCACCAGGAAGTTGATGGATAGATTTGATTTTGGGGAAGATTCTGAGCATAGTGAAGAATCCAAAAAGGAAATTCCTACTCCTCAACTCTCTCACGTTTCTGAGTCTGTGAACAACTCCATCTTCCATCAGATagcagaacagctgcagcagcagaacctggagcagttgcggcagcagctcctggagcagcagcagcctcagaagGTAACTCCTCAGGACAGCCAGGAGGGAGCATTTGGCTCTGAGCACTCAGCTTCACCCTCACAAGGGAGTAGCCAACAGCATTTTCTGGAACCTGAAGCAAATTTAGATGATTCCATAGACATTCAGCAACAGGATATGGATATTGATGAAGGGCAAGATGTTGTTGAAGAGGAGATCTTTGAACCAGAAGCTAAGAAAGTAGCTGTTCGCTCAAGATCAAGAACTCATTCACGATCTCGATCAAGGTCACCAAGAAAACGGAGGTCCAGGTCACGCTCTGGGTCCCGAAAGCGAAAGCATAGGAAGAGGTCTCGCTCCCGCTCCAGAGAGAGAAAGAGAAAATCCTCACGTTCCTATTCAAGTGAACGCAGAGCCAGGGAAAGGGAGAAAGAACGCCAAAAAAAGGGCTTGCCTCCTGTCAGATCGAAAACGCTAAGTGTATGCAGCACTACTCTCTGGGTTGGCCAAGTGGACAAGAAGGCTACACAGCAAGATTTAACCAACCTTTTTGAGGAGTTTGGGCAAATCGAATCCATTAATATGATTCCACCCAGGGGCTGTGCATATGTCTGTATGGTTCATCGACAAGATTCATTTCGGGCTCTCCAGAAACTGAGTTCAGGATCCTATAAAATTGGTTCCAAGGTCATTAAGATTGCCTGGGCTTTGAACAAAGGTGTAAAGACAGAATACAAACAGTTCTGGGACGTGGATCTTGGAGTCACATATATACCCTGGGAAAAAGTTAAAGTAGATGACTTGGATGGCTTTGCAGAGGGAGGCATGATTGATCAGGAAACTGTAAATGCTGAATGGGAAACTGTGAAAACCTCAGAACCCGTTAAAGAGACTGTCCAGACGACACAGAGTCCAGCTGCAGTTGAGAAGGAGACAGTGGTCACAACGCAGTCAGAGGTTTTCCCTCCTCCTGTCACCATGCTGCAGATTCCTGTAGCACCAACCGTTCCTGCAGTTAGCTTAGTTCCACCAGCGTTTCCTGTGTCGATGCCTGTCCCCCCTCCTGGATTCAGCCCCATCCCTCCACCTCCTTTTCTACGAGCAAGTTTTAACCCTTCACAACCACCTCCTGGTTTTATGCCACCTCCAGTTCCCCCACCTGTGGTACCTCCCCCTGCAATCCCACCCGTAGTACCAACATCTTTAGTGCAACCACCATTGTCTATGACCCCAGAAACTGTGAAAGATGTTGGATTTGGCAGCCTTGTTTTACCAGGTGGTTCTGTTGCTGGCAATCTTGCTCCTTCAACTCTACCAGCTGGAAATGTTTTTAATCCTCCCAGTAAAGCAGAGCCTGAAGAAAAAGTACCTCACCTTACAGAACACCAGATTCCTTCTGGTGAGAATACCAGACCAGTGATTCCAAGTGATATTCCAAGCAGTGCTCCAATGTTAGCACAGCCGCCTGGGGCCTCAAACACCTCTGGGATCCTGTGCGTGCAGAGACCAAACGTATCAAGCAATTCTGAAATTCTGGGGGTTCGTCCAGCCAATGTTTCCAACAGTGCTGCGATTATGGGAGCCCAGCCACCAAATATGCTCAATAACTCTGGAATTTTGGGCATACAGCCACCAAATGTGTCCAGTGGCTCTGGACTTCTTGGGGTACTGCCTCCAAACTTGCCTAACAACTCTGGACTTGTAGGACTACAGCCACCAAATGTTACAAATCCTGCTGGACTTTTGGGAACACAGCCACCAATTGGACCTCAAAACTTACCCCCTTTAACCATCCCTGCTCAAAGGATGCCTGCGTTGCCAATGTTAGACATTCGTCCGGGACTGATAGCACAGGCTCCTGGGCCAAGATTCCCTTTACTACAGCCTGGAATTCCACCACAACGGGGTATCCCTCCCCCATCGGTACTTGACGCAGCTCTTCATCCACCACCCCGTGGACCTTTTCCTCCAGGGGATCTTTTTAGTCAGCCAGAAAGACCTTTTCTGGCTCCTGGAAGACCAAATATAGACAGTGTTCCTAACCCAGATAAAAGAATACCACTTGGGAATGACAATATCCAGCAGGAAGGGGATAGAGATTACCGCTTTCCTCCTATAGAAACCAGGGAGGGCATTAATAGACCTCCTCCAGTGGATGTTAGGGATGTGGTTGGACGACCTATAGATCCCAGAGAAGGCCCTGGAAGGCCTCCGTTAGATGGTAGGGATCATTTTGGAAGACCTCCAGTGGACATGAGAGAGACTCTTGTGAGGCCAGGTCTAGACCACCTTGGCCGAAGAGACCACTTTGGCTTTCCCCCAGAAAAGCCTTGGGGGCCTAGAGATTTCGATGAGAGAGAGCACCGAGTTCTGCCTGTCTTTGGTGGTCCAAAGGGCTTACATGAAGAAAGAGGCAGATTTCGGGCTGGAAATTATCGATTTGATCCTAGAAGTGGTCCTTGGAACAGAGGATTTGGACAAGAAGTTCACAGAGATTTTGATGACCGCAGAAGACCCTGGGAGAGGCAGAGGGATAGGGATGACAGAGATTTTGATTTCTGCAGAGAAATTAATGGGAATCGTCTTGGACGAGATAGAATTCAAAACACTTGGGTTCCCCCTCCTCATGCTCGGGTTTTTGATTATTTCGAAGGGGCCACTTCTCAACGGAAAGGTGAGAATGTGCCTCAAGTTAATGGTGAAAATACAGAGAGACATGCTCCGCCACCGCCTTTGCCAGTGCAGAAGGACCCTGAACTCTATGAGAAGCTGGCGTCTTCAGGAGACGCAGACAAGGAGGAGAGCGGCACAGCTGCTGGTGTAGAGAGTGAAGCGGTGGTAGAAAGCACAGAGACTGAGGGGACATAACATCGCTCAGTAGGTAAAAGAAACCTTTTGTACAGTTGTCATCTCTGTAAGAGGTTAATGGCTGACTGCACCACAGTTGTTCACGTTTATCTACCAGAACTAAGTTAATCTGATGTTCGTGTTCACCTTTCTCTTAAAATAATTGTACAACTGACTTGTATAGACATTGTTCTTAATATGAACATGGTAGGTAAACATTTTTTTATTTTTCTGATAAAGTATAAATGTTGCCCCAGATTCTTTTAACGTCAAGGAGATGCTAACAGCTTGTCGAGACTTCCTATGGAAGAGAAGGTTTTAGACACAGTCATTGGGATGGGTATGGCAATGACATATTTCAGAACAGCAAGGTGTGGCACATCTCCATATCTCTAGGCTGCTGCAGGGTTTTAAGGTGACAGACAAAGCTGTGATATTTTATGCAAGGACTGGCTCTAGATTCTTGAGGAGCATAATACAGAGATTTTAAAAAGTGATTTTGTAAAAATCTCCACTATGGTCTCTGTTACTCCAAAGTAAGTGTGTGTGATTTGTTCCTCATACTGCAGTAAGTAAAAAAGAAAAGAAGCAAACAACATAAACATTCAAATACGTTTTAATGTTGGGTGAATTTTGTTTTTAGATGCCAATAAAACTTATTTGTTTGA