Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl15
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L15
Also known as Rpl10
Coordinate chr15:8188717-8192153
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Involved in response to ethanol. Located in A band. Part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 12. Orthologous to human RPL15 (ribosomal protein L15). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl15

Retroname Coord Strand Genomic Region ENSG
Rpl15P1 chr2:113872512-113873157 + Intergenic
N/A UCSC
Rpl15P2 chr2:198194606-198195305 - Intergenic
N/A UCSC
Rpl15P3 chr2:205499504-205500279 - Intergenic
N/A UCSC
Rpl15P4 chr2:52292333-52293034 + Intergenic
N/A UCSC
Rpl15P5 chr3:23080998-23081484 + Intragenic
N/A UCSC
Rpl15P6 chr4:82912544-82913090 - Intragenic
N/A UCSC
Rpl15P7 chr5:144642361-144642839 + Intergenic
N/A UCSC
Rpl15P8 chr6:77538436-77539121 + Intergenic
N/A UCSC
Rpl15P9 chr7:100262815-100263546 + Intergenic
N/A UCSC
Rpl15P10 chr7:37414596-37415296 + Intergenic
N/A UCSC
Rpl15P11 chr7:90990881-90991509 - Intergenic
N/A UCSC
Rpl15P12 chr8:72245332-72246032 + Intragenic
N/A UCSC
Rpl15P13 chr10:53297522-53298259 + Intergenic
N/A UCSC
Rpl15P14 chr10:83703605-83704311 + Intergenic
N/A UCSC
Rpl15P15 chr12:12203608-12204541 + Intergenic
N/A UCSC
Rpl15P16 chr13:70222425-70223087 - Intergenic
N/A UCSC
Rpl15P17 chr17:975200-975802 - Intergenic
N/A UCSC
Rpl15P18 chr18:49796278-49796990 + Intergenic
N/A UCSC
Rpl15P19 chr18:72557872-72558581 - Intragenic
N/A UCSC
Rpl15P20 chr20:37985653-37986319 + Intergenic
N/A UCSC
Rpl15P21 chrX:30147498-30148023 + Intergenic
N/A UCSC
Rpl15P22 chrX:36987518-36988229 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_139114.3
GTGGGGGAGGAGCCACAAAAGGGATTGTGGGAGAAAGGCTTCTTCCTTTCCTCTAGTGGCAGCCATCAGGTGAGCCAAGATGGGTGCATACAAATACATCCAGGAGCTGTGGAGGAAGAAGCAGTCCGACGTGATGCGCTTCCTTCTAAGGGTCCGCTGCTGGCAGTACCGCCAGCTCTCTGCGCTGCACAGGGCTCCCCGCCCCACCCGGCCTGATAAGGCGCGAAGGCTGGGATACAAGGCTAAGCAAGGTTATGTCATTTACAGGATCCGTGTCCGCCGCGGTGGTCGCAAGCGCCCAGTTCCTAAGGGTGCAACCTACGGCAAGCCTGTCCACCACGGTGTTAACCAGCTGAAGTTTGCCCGAAGCCTTCAGTCTGTTGCTGAGGAGAGAGCTGGGCGCCATTGTGGAGCTTTGAGAGTCCTGAATTCCTACTGGGTTGGTGAAGATTCCACATATAAATTTTTTGAGGTTATCCTCATTGATCCATTCCATAAAGCTATCAGAAGAAATCCCGACACCCAATGGATTACCAAACCAGTCCACAAGCACAGGGAGATGCGTGGGCTGACATCTGCTGGCCGCAAGAGCCGTGGCCTTGGAAAGGGCCACAAGTTCCACCACACCATTGGTGGGTCTCGCCGTGCAGCCTGGAGAAGGCGCAACACTCTTCAGCTCCACCGTTACCGCTAATTGACGTAATATTTGTAAAATTCATATCCAATAAACAACTTAGGACAGTCCTCTCTGCTCACAGGTGTTATTTGTCTGTTAGAACTAGCCTGCGGGTCGTGAGTGCTCTGTGGGGGATGGGAGCTAAAGTGCAGTAGTAGGAAACGGCGAGTGGCGGCGCGTCTTGTTTCTGATGTACTCTGTTTGCAATTTTTGCTTAGGGGATTAAGTGTATAGTGTTTGTGCCAAGTGGTATCCTGTGTGTAAGACTTAAAGTCCTGAAACTAGCCTAGATGCATGAGAGAGAACCTACAGCTTTACAGTGGGGTCTCTGTTCACTGAAGTGGCTGGCTGCTTGGAAGCTGGATGAGTACAGACAGGGAGTTGGATTTTGCTTAGAAATATGTAGGAAGAGAGGGCTTCAAACCTGTTTTGTGACTATTCATAGAAGAGAGATCAACTATAGCTCACATTTTGAGAATTGAATCCGTGTTCCATTTTCAGAACACTGGGTAAATTTGTTGGAAGAGGTTTCACTTCTGTTGGATCTAGAGCATAGGTTTGACATGTGTGGATTTTGAAGCTAGTGAAGATTGAACAGTGGATAGGGAAGGGCAGATTATTTCCATTAGGATTTATAAGCTAGTAACCATGTGGTTGCAAGTTCCTGTCAACCAAGCAAACACAGTAAGTGGTGTCAGGCTTACAAACATTAAGCTTTAGTAGCAGCTGGTGTGTGAAGAGGCAGGTGGATCTCCAATTCCAGGACTGCCTACAGTATAGAGAAAATGTCTCTATTCCCGTCCATAATAGAGCAAAACCAAAAATTGGGGGCTTCCAATCAATTCGTCTTGGGTAAGGAACGTCCATTGGTAGTTTGATTTCATTGTTTACAGTCTGCCCGTGGGTAGATGCTCAGGTTGCTGTCTCCTGGCATTGCCTGGACATTCTACACTCATAAAGGCCACACATGCCACTATGTTTTATTTCTATTTGTGCCATGCCTTGTAGTTTCCCAAAGTGATTTGAGTGGAAAAAGCAGAAATCGTCCCTATTACATCTGGGTTTGCTCTTTTGGACAGCAGCTAGCTTGGTATCCAAGTCTAAGTGATGCTTTTATTAAACCGATTTTTCCTTGGAGATTTTTAAAGGAAGATTTGATTTCCAGAAAATACTTGAGACCTAAAATTCTCAGCAAAACAAGTCACTGTGTGTAGAGGTTGTTCAACTAGAATAATAAATGTCTGTTAAACAAGTGGA