Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Atxn7
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ataxin 7
Also known as A430107N12Rik|Sca7|ataxin-7
Coordinate chr14:8358367-8508324
Strand -
Gene summary Enables chromatin binding activity. Acts upstream of or within negative regulation of insulin-like growth factor receptor signaling pathway; negative regulation of phosphorylation; and positive regulation of transcription by RNA polymerase II. Located in cytoplasm and nucleus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; peripheral nervous system; and retina. Used to study spinocerebellar ataxia type 7. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 7. Orthologous to human ATXN7 (ataxin 7). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atxn7

Retroname Coord Strand Genomic Region ENSG
Atxn7P1 chr3:36301322-36301510 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_139227.4
GCTTTCGTTACTGCGCCGGGGCCGACCGGCAGGCTCTTCCATAGGTGGCTGCGTTTCCGACTTCGCCCTGGCTCCACTCCGGGGGCTTGACGTGCAAACTTCGCCGGAGcgagcagagagggagggaccgGCGAGGGGGAGGAGGCGACAGGAGGCGCCTCCGCTTAAGGGAGCCGGCCGGGCGCCGCCGCTCGGACGGACGCGCGGACGGAAGGAAGGAGCGGGGCTGCCGGCTGGGCCGGGATGCGAGCGCCCGCAGGGAGCGGAAAGAATGTCGGAGCGGGCCGCGGATGACGTCAGGGGGGAGCCGCGCCGCGCGGCGGGCGGAGCAGCGGCCGcccggcagcagcagcagcagccacagcctcTGCAGCCCCAGCGGCAGCACCCGCCGCTGCGGCGCCCACGGGCGGAGGACGGCGGCACCGGGGACACCACCACCTCGGCCGCCGCCATGGCGACGGTTGGGGAGCGCAGGCCCTTGCCCAGTCCCGAAGCGATGCTGGGACAGTCGTGGAATCTGTGGGTGGAAGCTTCCAAACTTCCTGGGAAGGATGGGACCGAATTGGATGAAAGTTTCAAGGAGTTTGGGAAAAACCGCGAAGTCATGGGGCTCTGCCGGGAAGATATGCCGATCTTTGGTCTCTGCCCAGCACATGATGATTTCTACTTGGTGGTGTGTAATGACTGCAACCAAGTTGTCAAACCGCAGGCATTTCAATCTCACTATGaaAGAAGACATAGCTCATCTAGCAAGCCTGCCTTGGCTGTTCCTCACACTTCAGTATTTTCCCTCTTACCTTCTCTGTCCAAAAGCAAAGGCAGTGGTGCTGGTGGAAGCAGCCGGCCTCCCAGTGGAGGGGTCCTTTGCGCATCCTCAAGCTCCAAGTTACTCAGATTGCCCAAAGAGAAACTTCCGCTCAGGGGAAACATGAAACCCATGCATCCCGTGCAACAGATTAAAGTCCCCCACGGACGAGTCATGACGCCCTCTGTGAAGGTAGAAAAGATGCATCCGAAGATGGATGGCACACTACTGAAATCCACAGTGGGGCCAGCCTGTCCTGCTACTATGAGCTCTGCAGTCAAGCCTGGCCTTAACTGTCCCTCAATACCAAAGCCAACCTTGCCTTCACCCGGACAGATTCTGAACGGCAAAGGGCTTCCTGCAATGCCTACTCTGGAAAAGAAATCTGAAGACAGTTCTAATAACaggaaatttttaaataagagaTTATCAGAAAGAGAGTTTGATCCTGACATCCACTGTGGGGTCATTGATCTGGATACCAAGAAGCCCTGCACCAGGTCTTTGACTTGCAAGACACATTCCTTAACCCAGCGGAGAGCTGTTCAGGGTAGAAGAAAACGATTTGATGTGTTATTAGCTGAGCACAAAAACAAAGCCAGGGAGAAGGAGCTGATTCGCCATGACTCTCAGCAAGTGCCACATCCACTCAGGGACCCGCATCCCACCCCTCCCCGGACGCCACAGGAGCCGCAGCTTCCTGCAGAGTCAAAGCCTTTCTTAGCTAGTAAGCCGAAACCTCAGACCCCTAGTCTTCCAAGGCCTCCAGGCTGCCCAGCTCAGCAAGGAGGAAGTACCCCCATTGACCCTCCTCCAGGCCAGGAGTCTCCACACCCGCCCTTGCCTGCCACTGAGCCAGCTTCTCGGTTATCCAGTGAGGAGGGTGAAGGCGATGACAGAGAAGAGTCTGTTGAGAAACTGGACTGTCACTATTCAGGTCGTCACCCTCAGCCAGCATCGTTTTGCACATTTGGGAGCCGGCAGATTGGAAGAGGTTATTATGTGTTTGACTCCAGGTGGAACCGGCTTCGCTGTGCCCTCAACCTCATGGTAGAGAAGCATCTGAATGCACAGCTATGGAAGAAAATCCCACCAGTGCCCTGTACCACATCACCTGTTTCTGCCCGTGTTCCTCACCGGACAAATTCTGTGCCGACATCACAAGGTGGGATCAGCTACTTAGCAGCAACCACTGTCTCCGCGCCTCCAGTCCTGCTGTCGTCCACCTGCATCTCCCCAAATAGCAAATCGGTACCAGCTCATGGAACGACGCTAAATGCACAGCCTGCTGGTTCTGGGGCGATGGACCCTGTGTGCAGTGTGCAGTCCAGACAAGTGTCGGCTTCATCCTCACCCCCCTCCACGCCCTCGGGCCTCTCTTCcgtcccctcttcccctctgtcCAGAAAACCTCAGAAATGGAAACCTAGCAAGTCTATAAGGCCCAAGGAATCTTCTGCTCTCAGCACTAACTGTCACAATGCCAGTAGCAGTACCAGTGGTGGCTCAGGAAAGAAACGCAAAAACAGTTCCCCACTGTtagttccttcttcctcctcttcgtcatcctcctcctcctcctcttctcattcCGTGAACTCTTTTAGGAAAAACTGTGTGGCTCACTCTGGGACTCCATACCTGTCAACAGCACCATCTTCCCACAGCATCGGCCTCAACTGTGTGACAAATAAAACACACTCGGTGAGCCTCCGGCATGAGCAGGCAGGGCGGGGTCCCGCTGGTGTGAGCTCTGCAGAGCCCATCAAGAGGATGAGTGTAATGGTGAACAGCAGCGACTCCACTCTCTCTCTCGGCCCATTCATCCACCAGGCTAGTGAACTGCCTGTcaacccacactcacacactcctCTAGACAAACTcatagggaagaaaagaaagtgctCTCCAGGCTCTAGCACTGTTGGCAACAGTGGCAGCAAACCCACAAAGGTTGCCAAGTTGCCAGCTATGAACAACGTCCACATGAAACACACAGGCAACATCTCAGGGGCACAAGGATTGACGAACAATTCCCTCCTCCATCAGCCAAAGGCACGACCCTGACAGCTGACAGTACCACTGGAAGgaataatccagacatttttgaAGACAAGCTACGCCTCTGCTCAGCACTCTGGACTCCACGATGCCTTTGAGTCTCTTTTTCTAACTCCTGTGGGCCTTCAGGGTAACCTCTGGCTGTTTGACAAGGATTTCCCGAAGCTGTGTCTGTAGCAGTGAGTACAGGTAAAGAACACTGGATCACCTCAGCCACCGGATTGCTCTCAGTGTTAAAGTGGTCTGGACTGCTTGCTCCCAATCCGTGAGAAGTTTGTGTttgtattgtgttttgttttgttttttcatttggagcatatcATGGAGTCACTCTTGAAGTAGATTGGCTGGGGAGGATCATTTCTGTAGCcttgccttcctttttctttgccATCTGTCAGTCAGGCTCCAGAAGGTAGGCACCTTAACTGGAGACTGAAGGCCTCCAAGGAAAGGGGAGTGAGCTGCATCCTGAGAGCCTCCTAGAGGATACCTGGCTTTAGAGTTTTATAGCGCTGTTGAGGAATAGTACACTGAGATGTTTGTTGGTCAGTGCGTCATGACATAGTAGCCCCGCACCTTTTCAGTTAATTTGGGATGAGAAGCTTATCAAGTTCTTCAGACGTGAGGACTGGCTCGAAGCTGCTGACGCCTGGATATTAAGTTTAAAGGATCTCAGAAGCTTAGTTTTTATGGTACAAAAGCATGtgtgatagaaagagagaaagaaaaaggaagaatgaagaaaagaaaaatggaaagagagacaagGAAAGCAGTTGGTGATGAAAAGCCAACTGGGACACTGGATTCAGGGAGGTGAGAAAATTTTCAAGTGAGGCAAAATTTGTAGGATTTCCAAAGAGCCTGACTTGTCTCGCTGCTGTGATTGTGTTGATCAGTGTGTCAGATTGGGTCATTGTCTTACTCGGTCTGCTTTTTGAGATTtgcctttttaaaagttattatcaTGTCCTTAAAATTTCCAAGGCATTACTCCCACTTCCTCTTTGACTTAGTGTTTGAAGAAGTAAGTGTGAGTCTGTGCTTCCAGGCCTGCTGCCTGCCGTGTGTCTGTCCCGGCTTCCTGCCAGTCCAGTCGCTGGTTGTTTGAATGCAGGTGGGCTGAGGTGGGGATCCCCGAGAAAGGGTGCGTGCCACGGAGAGAAGCAGCTCGCAGAAGGGGGGGTGTTTACTAGTGCTCACCCTTCTCTGTTGTGACAGTGACAGCCATCTGTCTTCCTTTAGTGAGGCTTAACGCCCTCCTTAAGATTTCTCAGTGCCCCACTCCCAAAGAATGTTTAATGTGTTAACACATTGCTTGAAAAGACGTCTGCCAGTGAACTTGGGCATGATTTAGGGCCGGCCACTGTAACACCTCCTGCTCAGAGGACCGAGTCCTCGGGCTTAGGAAGAGTACAGCAGAGTGGCCTACAGGACAGCCCCCAAGGCTCCTAGCCCTGTCCTGGCCAGTGTCTGGGCATAGCCTTTCTCTACAGTTCTTAGATTACAAACTTGAGATTCAGGGAATTTCAGTCAACAGCAGGTAGAATGAATACATACTTGGTTACCAGCCTAATAATGTGAATTGCTACATTTACTCTTATTATGTAAGAACACAAAGACTTTATGCAGATACTTTAACTGTAAATTAATGGAAATGTTGAATTTTTTaaggaagggaaaacaaaatcttATTCACTTATTATGCAGTCAGTCAGtgaatgtttgttttaaagatgataCTAGAGCAGCTCTGAGGAGAGAGCCCAGATGGGCCAGTGTGGAAGTTAGGAGGCTCATCTGGTTGTCTCTCCTAGTGCTGGGCAAGGAGGAGAGGGAATCCAAGCTCACACAGTCATTACTCGATGACAAGTGCAATGGGGTATGGGGAAGATTTATTTTCAGAGCCGGGACTTGATGGTTATAAACAAAGTTGCTTTTAATGATGGAATTTATAGACAGATGTTCCAAAAGATGTGAATAGGAGCCACAATAGGAAGTTTATTCAGAATAAAGTAGATACTTAGGTTAATGAGTGTTATAATTTGATTCCTTAGACTGGGACTTTAATTGAACTTCATTATATCTCCAGGAAACACACAGAGCCTCCGGATTAGGAAAAGCCATTTTTTGGATTTTGCCTGCCACAAACAGACATATTCTAAACAGTGCTACTAAAGTTTAGActgttcaaatattttattttctctgacaACTACTTTTTATGATGATGAACAATTAAGACCATTTAAAATATGGGAGTACaaatatttttttgaatttaATCTTAACTTGCAAAAAACAAATTTGCAGTGCTTGGGTTATTTCTAGACAGACTTCGTTCGGTGTCAATTTAAAACCACCataattttttatattctttccaatAGAATTCATAACAGCTTCTGCAGTTTTCTTaaactacaaaaaataaaataaaaaataaaaaataaaataaaagtgctgCAATGATGaacaaagaattataaaaaaacctacttttgtatctttattttgGAATTTCTTGTTCTATTATAAATATGGAAGTATCCCTATTTCAGAAGAcatattttgttaaaaatgaattgtacatatttaaataagtatttttGCACAGGTCTTTTTTTCTGATATCCTGTTTTGGTACAATTGAGATCatctagtatttatttattaattaataaaaataaataccttttTATAATTTGAAGTGGTTCACTGCCAAGCCAGTAGTTTAGAACCTGCCTCCTTTACAGTTAAGGGATGCCTCTGTTGTGTGGGAGTCGCTGTCCCTTTTAGTGTCTTGGGAGTGGTTTTATACAGATGAAGCGGGCACGGCGTCTCTGCTGCCTGATTTCCAAATAGACTACATGGAGCTAAGTGACACACTGCTTTTCCTTGtttagtgagtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgagagagaggagagagagaagggggcagtGAGTGTTCCCACTTGCCCGCTTGCTCTCTGAGCACACCCGTGTTATTAGTATATGATGTGGTTTAAAACTaatgaggaaacaaacaaaacacactgaAAGTGCCTGAACCTAGTTTAAGCTCAGACAGACATCTTTAAAGACTTGAATGCTGAGTTGAACTTTTGGAGTTTGCTTTTTCCACCTAAATATTATTTCTTAAAGTTTTAGGGAAGAAGTTAAAAGCCACCAAGACTGGTGATTTTTATAAGGTATTTTAAAATTGAGACCTTTTGGTTCACAGTAATTTAACTGGCAATGGACTACCCAGTGCCACCAAGGGTTATAAACTGTTGTCAGCCAGCAACTGTTTTGTTATTCACAGTTTAAGAtaggatatttaaaatattttgtattaaaaaataCAAGAAGTACCTCTGAGAACattgaaaaaatgttttaatttgaaaaacaaaaaagtaacttataaaggcagctGTCTTCCTGTAAGAGTTCTGTTGCCAATGGACTTCTTCATGTCTCCATGCTGTCCTGGGTTGGGGAAGTTAGGCTTTGAAAAGTGATTGTTGAACGTTTTACTGTTTAAGAGAGTAATCATTTTTACATCTTATGTAAGACATTGTACGTTCTTCAGATCACTTAGGTGAGCACTACATACTGTCAGTGAATGCAGGGCCttgaaaggaactttttttttgagCTTGTTCATTAAAGCAATCTCCTGTGTTAAAATGTGTGGCTAGTTTGATCCATGTGTACCCATAATCCAGAGCGTCTCAGCTGGACTGTGTGTGGCTGCTGTGTAGAAATGAACAAATGTCAAGCGTAGAAAATGACTTTGGATATTTAAAGGAGAAGAAATATATAGTCTATTTGTTTTATAACAAGtttctgtaaataaaataatttatactaTTTATAAGAAAAAGTTGTGTTTTGCTTTATGAGAAATTAGTTTGTTACTAAATGGGCAATAAAATTAGGACTTGTCAATAAA