Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Gtf3a
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name general transcription factor III A
Also known as -
Coordinate chr12:9856841-9864791
Strand -
Gene summary The product of this gene is a zinc finger protein with nine Cis[2]-His[2] zinc finger domains. It functions as an RNA polymerase III transcription factor to induce transcription of the 5S rRNA genes. The protein binds to a 50 bp internal promoter in the 5S genes called the internal control region (ICR), and nucleates formation of a stable preinitiation complex. This complex recruits the TFIIIC and TFIIIB transcription factors and RNA polymerase III to form the complete transcription complex. The protein is thought to be translated using a non-AUG translation initiation site in mammals based on sequence analysis, protein homology, and the size of the purified protein. [provided by RefSeq, Jul 2008]

Retrocopy(s) from Gtf3a

Retroname Coord Strand Genomic Region ENSG
Gtf3aP1 chr2:199776135-199776604 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001113570.1
GCGCAATCCTGGCGCATGGGGTTTAATGGGCGGGACCTGGCGCCTTTGCGGGCCGCGTTCCCGGAAGTGTCGGGTCTCTGGGCGCCGGTAGCTTGTGTCCCGCGTTCCGGGGACAGCACGTGGCTGCCCCGCCTCGGCCCGGGCGCAGTTGCGTCGCCCTGGAGCCGCGGGTCTCGGTCGCGGAAGCGGTGTCGTCCCTGACCATCGCGGACGCGTTCGTTCGGGCCTGTGTGGGCCCCGCCCCGCCGCGCCCCGCGCTCCCCAGCAGGTTCATCTGCTCCTTTCCTGACTGCAGCGCTAGTTACAACAAAGCCTGGAAGCTAGACGCGCACCTCTGCAAGCACACGGGGGAGAGGCCGTTCGTTTGTGACTATGAGGGCTGTGGCAAAGCCTTCATCAGGGACTACCATCTGAGTCGACACATCCTGATTCACACCGGAGAAAAGCCATTTGTTTGTGCAGATAATGGCTGTAATCAGAAATTCAGCACAAAGTCAAACTTGAAGAAACACATTGAACGCAAACATGAAAATCCACAAAAACAGTATGTGTGCAATTTTGAAGGTTGCAAGAAGGCCTTTAAGAAGCACCAGCAGCTGAGAACCCATCAGTGCCAGCACACAAATGAGCCACTCTTCAGGTGTACCCACGAGGGATGTGGGAAGCACTTTGCCTCCCCCAGCAGGCTGAAACGGCATGGGAAGGTTCACGAGGGCTACCTATGTCAAAAGGGATGTTCCTTTGTGGGAAAAACGTGGACAGAGCTTCTGAAGCACACGAGAGAAGCCCATAAAGAGGAGGTGACCTGCACAGTGTGCCAGAAGATGTTCAAGCGCAAAGATCACCTTAAGCAGCACATGAAGACTCACGCTCCGGAGAGGGATGTGTACCGCTGCCCGCGGGAAGGCTGTGCAAGGACCTACACCACCGTGTTCAACCTGCAGAGCCACATTCTCTCCTTCCACGAGGAAAAGCGCCCATTTGTGTGTGAGCACGCTGGCTGTGGCAAGACGTTTGCAATGAAACAAAGTCTCATGAGGCACAGTGTCGTGCACGATCCTGACAAGAAGAGGATGAAGCTCAAAGTTAGACCACCTCGGGAGAGACGCAGCTTGGCCTCGCGCCTCAGCGGGTACGTCCCTCCTAAGGGGAAACAAGAGCCCGACTGCTCCTTGCCTAACAGCACAGAGTCCAGCAGCAGCCCAGAGGCCACGATGCTCGCCCCAGCTGCGTTACTTACTGTCCACTAGTTGGGAGGGACTTCAGAGCGGCTAGCAGAGGCTTCTGGAGAAGCCCGGACTTCTCATTAAATCACTGACACAGGACGTCCGA