Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Cstb
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name cystatin B
Also known as Cyb|Epm1|Stfb
Coordinate chr20:10966357-10968399
Strand -
Gene summary Predicted to enable cysteine-type endopeptidase inhibitor activity and protease binding activity. Predicted to be involved in negative regulation of peptidase activity. Predicted to act upstream of or within adult locomotory behavior. Predicted to be located in cytoplasm; extracellular space; and nucleolus. Predicted to be active in cytosol. Biomarker of visual epilepsy. Human ortholog(s) of this gene implicated in Unverricht-Lundborg syndrome and progressive myoclonus epilepsy 1A. Orthologous to human CSTB (cystatin B). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cstb

Retroname Coord Strand Genomic Region ENSG
CstbP1 chr1:263551904-263552321 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_012838.2
GGGGCCGAGCCAGGTTTTTCTAGGGTCCAGACACCCAGGTCTCCTAGTTGGCTCTCTCCGTAGCTTCTCTGTGATATTCTAACCAGTGCTTGCCAAGATGATGTGTGGCGCGCCATCCGCCACAATGCCGGCCACGACCGAGACGCAGGAGATCGCCGACAAGGTGAAGTCTCAACTTGAAGAGAAAGCAAATCAGAAGTTTGATGTCTTTAAAGCCATATCCTTCAGGAGACAGGTAGTGGCCGGCACCAACTTCTTCATCAAGGTTGATGTCGGCGAAGAAAAATGTGTGCACTTGAGGGTGTTTGAACCCCTCCCTCATGAGAACAAGCCTTTGACCTTGTCTTCTTACCAGACCGACAAAGAAAAGCACGATGAGCTAACCTACTTCTGATTCTGCAGCCCCTTTGCCAAATACTTCACCTTTGGAATCCGTGTTTGGGACCACGAAGTAAATACCCCTCTGTGAGCAGCTTCCTTTGTGATGCCCAAACGGCGTTGTATTTTGTTTCTTTCCAAACAATTATTTTCAGAAAACTGTATAAAACTATCTCTCTAAATATATATTTTTAGAGACCGTA