Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Cycs
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name cytochrome c, somatic
Also known as CYCSA
Coordinate chr4:80331226-80333326
Strand -
Gene summary Enables enzyme binding activity. Involved in several processes, including mitochondrial electron transport, cytochrome c to oxygen; negative regulation of hydrogen peroxide biosynthetic process; and response to ischemia. Located in cytosol and mitochondrion. Human ortholog(s) of this gene implicated in cholangiocarcinoma; lung non-small cell carcinoma; pancreatic cancer; and thrombocytopenia. Orthologous to human CYCS (cytochrome c, somatic). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cycs

Retroname Coord Strand Genomic Region ENSG
CycsP1 chr1:125159196-125159336 + Intragenic
N/A UCSC
CycsP2 chr1:178367428-178367877 - Intragenic
N/A UCSC
CycsP3 chr1:248411376-248411777 - Intergenic
N/A UCSC
CycsP4 chr1:3674153-3674849 - Intergenic
N/A UCSC
CycsP5 chr1:40476975-40477436 + Intragenic
N/A UCSC
CycsP6 chr1:66038541-66039489 + Intragenic
N/A UCSC
CycsP7 chr2:192570859-192571753 - Intergenic
N/A UCSC
CycsP8 chr2:195661659-195661888 - Intragenic
N/A UCSC
CycsP9 chr2:244823793-244824523 + Intragenic
N/A UCSC
CycsP10 chr2:95101092-95102032 - Intragenic
N/A UCSC
CycsP11 chr3:124514498-124515316 + Intergenic
N/A UCSC
CycsP12 chr4:119220785-119221263 + Intergenic
N/A UCSC
CycsP13 chr5:98571846-98572164 - Intergenic
N/A UCSC
CycsP14 chr7:121471951-121472214 + Intragenic
N/A UCSC
CycsP15 chr8:22033223-22034167 + Intergenic
N/A UCSC
CycsP16 chr8:77150134-77150791 + Intragenic
N/A UCSC
CycsP17 chr8:85903966-85904699 - Intragenic
N/A UCSC
CycsP18 chr9:71535096-71535494 + Intragenic
N/A UCSC
CycsP19 chr9:85517897-85519070 - Intragenic
N/A UCSC
CycsP20 chr10:36501446-36502382 - Intergenic
N/A UCSC
CycsP21 chr10:48643328-48643711 + Intragenic
N/A UCSC
CycsP22 chr10:93485848-93486755 - Intragenic
N/A UCSC
CycsP23 chr14:64528846-64529822 - Intragenic
N/A UCSC
CycsP24 chr14:71868318-71868743 + Intragenic
N/A UCSC
CycsP25 chr15:27407397-27408307 - Intergenic
N/A UCSC
CycsP26 chr15:87461951-87462876 + Intragenic
N/A UCSC
CycsP27 chr15:93830345-93831270 + Intragenic
N/A UCSC
CycsP28 chr16:14363229-14363645 + Intergenic
N/A UCSC
CycsP29 chr18:62475574-62476767 - Intergenic
N/A UCSC
CycsP30 chr19:24773995-24774970 + Intergenic
N/A UCSC
CycsP31 chr20:55735937-55736836 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_012839.2
CTTGGGCTAGAGAGCGGGACGTCTCCCTAAGAGTCTGATCCTTTGTGGTGTTGACCAGCCCGGACCGAATTTAAAATGGGTGATGTTGAAAAAGGCAAGAAGATTTTTGTTCAAAAGTGTGCCCAGTGCCACACTGTGGAAAAAGGAGGCAAGCATAAGACTGGACCAAACCTCCATGGTCTGTTTGGGCGGAAGACAGGCCAGGCTGCTGGATTCTCTTACACAGATGCCAACAAGAACAAAGGTATCACCTGGGGAGAGGATACCCTGATGGAGTATTTGGAAAATCCCAAAAAGTACATCCCTGGAACAAAAATGATCTTCGCTGGAATTAAGAAGAAGGGAGAAAGGGCAGACCTAATAGCTTATCTTAAAAAGGCTACTAATGAATAATTCCACTGCCTTATTTATTACAAAACAAATGTCTCATGGCTTTTAATGTATACCATAATTTAATTCATACACCAAATTCAGATCATGAATGGCTAACAATGTTTTTGTTGGACAGCCCCGATTTAAGTAAAATTGACTTGTCATAAAGTGGATATGATCTTTTTTAAAGTAACACTTCCAATTGAATACATGTTATCACTGCTTTCCCTTTCTCAAGATAAGATTGGACTTAATTAGTAATATTTTCCTTTCCATAAATATGAGGGTGTCGCCTCAAACCTATTGAATGGTTTTATACTTAGATTTATATAACTGGGTATATGAATATGTTCAAATCCTGGGAAAATTCTGTCACTGTCTCAGAAACAAGAAGACTCACCCGTGCTTCAGTGTGTGTAAACTGGCCTCTGACAGGCAATGCTAAACACCAGGACGGAACTATTCTTGACAGTGCTGTTTTAATTAGAATTCCCTACATCAATGATGCTGCCTTTCACCACTGAAAGGCATTTACTGTGGTTTATGTATGATATCAAATAAAGAGTATTTAACACTTCTTTATAGTTGATCTACAAGTTAAAATGCTTTTAAGAACAAGTTAGCCCTTTTAAATCTTCTCTTATCTAAGACTAAGCTGTAATTCAGAATTGTCCTTAAATGCCCATTCGGAAAGTCATAACTGGAATTTCTGTTCATGCCTGATTGGGAGTGGTACTCTTTTCTAACTTACTAGATGGAAAGATGAAAATAAAGGAGATAATTTGTAAGTTATCAACAGTCAGAAGATAATTAAATCAATCACAAATCA