Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Phb1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name prohibitin 1
Also known as Phb
Coordinate chr10:83476107-83488878
Strand +
Gene summary Predicted to enable several functions, including complement binding activity; histone deacetylase binding activity; and protein C-terminus binding activity. Involved in several processes, including female gonad development; positive regulation of protein kinase B signaling; and positive regulation of smooth muscle cell proliferation. Located in mitochondrial crista and nucleus. Is extrinsic component of mitochondrial outer membrane. Is active in GABA-ergic synapse; glutamatergic synapse; and postsynaptic density. Is extrinsic component of presynaptic active zone membrane. Biomarker of urinary bladder cancer. Human ortholog(s) of this gene implicated in breast cancer and sporadic breast cancer. Orthologous to human PHB (prohibitin). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Phb1

Retroname Coord Strand Genomic Region ENSG
PhbP1 chr1:247477334-247478144 + Intergenic
N/A UCSC
PhbP2 chr2:129924657-129925588 + Intergenic
N/A UCSC
PhbP3 chr2:132989196-132990128 + Intergenic
N/A UCSC
PhbP4 chr4:171201513-171202472 - Intergenic
N/A UCSC
PhbP5 chr5:101434262-101435632 - Intergenic
N/A UCSC
PhbP6 chr5:4744501-4745516 + Intergenic
N/A UCSC
PhbP7 chr6:115943100-115944106 - Intergenic
N/A UCSC
PhbP8 chr6:118507546-118508552 - Intergenic
N/A UCSC
PhbP9 chr6:138304201-138305187 - Intergenic
N/A UCSC
PhbP10 chr8:128559589-128560437 - Intergenic
N/A UCSC
PhbP11 chr8:8334799-8335770 - Intragenic
N/A UCSC
PhbP12 chr10:68925480-68926320 - Intragenic
N/A UCSC
PhbP13 chr13:16311202-16312075 + Intergenic
N/A UCSC
PhbP14 chr13:942896-943827 + Intergenic
N/A UCSC
PhbP15 chr14:67464281-67465212 - Intergenic
N/A UCSC
PhbP16 chr18:7248223-7250134 + Intergenic
N/A UCSC
PhbP17 chr19:9111961-9112944 + Intergenic
N/A UCSC
PhbP18 chr20:38344684-38345666 + Intergenic
N/A UCSC
PhbP19 chrX:113250891-113252689 + Intergenic
N/A UCSC
PhbP20 chrX:117174030-117174841 + Intergenic
N/A UCSC
PhbP21 chrX:34714157-34715154 - Intergenic
N/A UCSC
PhbP22 chrX:36729526-36730128 + Intragenic
N/A UCSC
PhbP23 chrX:68580890-68581695 + Intergenic
N/A UCSC
PhbP24 chrX:78285313-78285976 - Intergenic
N/A UCSC
PhbP25 chrX:80926979-80928584 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_031851.2
GGAATTCATGTGGAGGTCAGAGTGGAAACAGGTGTGAGCGGAAGCAACAGAAGGAGTCATGGCTGCCAAAGTGTTTGAGTCCATCGGAAAGTTCGGCCTGGCCTTAGCAGTTGCAGGAGGCGTGGTGAACTCTGCTCTATATAACGTGGATGCCGGACACAGAGCTGTCATCTTCGACCGATTCCGTGGCGTGCAGGACATCGTGGTAGGGGAAGGGACTCACTTCCTCATCCCCTGGGTACAGAAGCCAATCATCTTTGACTGCCGCTCTCGACCACGTAATGTGCCGGTCATCACCGGCAGCAAAGACTTGCAGAATGTCAACATCACACTACGTATCCTCTTCCGGCCGGTGGCCAGCCAGCTTCCTCGTATCTACACCAGCATTGGCGAGGACTATGATGAGCGGGTGCTGCCATCTATCACCACAGAGATCCTCAAGTCGGTGGTGGCTCGATTCGATGCTGGAGAATTGATTACCCAGCGAGAGCTGGTCTCCAGGCAGGTGAGTGATGACCTCACAGAGCGAGCAGCAACATTCGGGCTCATCCTGGATGACGTGTCCCTGACACATCTGACCTTCGGGAAGGAGTTCACAGAGGCGGTGGAAGCCAAACAGGTGGCTCAGCAGGAAGCAGAGAGAGCCAGATTTGTGGTGGAAAAGGCTGAGCAGCAGAAGAAGGCGGCCATCATCTCTGCTGAGGGTGACTCCAAAGCGGCTGAGCTGATCGCCAACTCACTGGCCACCGCCGGGGATGGCCTGATCGAGCTGCGAAAGCTGGAAGCTGCTGAGGACATTGCTTATCAGCTCTCCCGCTCTCGGAACATCACCTACCTGCCAGCAGGGCAGTCCGTGCTCCTCCAGCTCCCCCAGTAAGGCCAGCCAGGCCAGGGCCTCCATCGCTCTGAATGACGCCTTCCTTCTGCCCCACCCCAGAAATCACTGTGAAATTTAATGATTGGCTTAACATGAAGGAAATAAAGGTAAAATCACTTCATATCTCTAATTATCAAATGAAGCTTTTATTGTTACACTTTTTGCCCACTTTCATAACAAAATTGCCAAGTGCCTATGCAGACTGGCCTTCCACCCTGGGTGCTGGCAGTCGGCGGAAGAAAGGCAGGGCAGTGTGTGTGGTGGACGGGGAGCCAGCTGGCAGCCTGAGTAGACCTTGAGCCTCCATTCTGCCATATATTGAAGATTTACAGACAGTGGTGCACACACGTGAACCAAAAGGCAAGCCCTCAATTTTTCCAGCCATACGAACCCGGACAGATGCAGCTGAGGAGGGCCTGAGGAAGTGGTCTGTCTTAACTGTAAGGCCATTCCCTCTTAACCGTGACCAGCGGAAGCAGGTGTGTGCGTGCGACTAGGGCATGGAGTGAAGAATCTGCCCATCACGGTGGGTGGGCCTAATTTTGCTGCCCCCACCAGAGACCTAAACTTTGGATAGACTTGGATAGAATAAGAGGCCTGGACTGAGATGTGAGTCCTGTGGAAGACTTCCTGTCCACCCCCCACATTGGTCCTCTCAAATACCCAATGGGATTCCAGCTTGAAGGATTGCATCCTGCCGGGGCTGAGCACACCTGCCAAGGACACGTGCGCCTGCCTTCCCGCTCCCTCTCTTCGAGATTGCCCTTCCTTCCCAAGGGCTGTGGGCCAGAGCTCCGAAGGAAGCAATCAAGGAAAGAAAACACAATGTAAGCTGCTGTCAATAAATGACACCCAGACCCTC