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Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Atp5if1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ATP synthase inhibitory factor subunit 1
Also known as Atpi|Atpif1|IF1PA
Coordinate chr5:150719570-150723287
Strand -
Gene summary Enables ATPase inhibitor activity. Predicted to be involved in several processes, including mitochondrial depolarization; negative regulation of ATPase activity; and regulation of protein targeting to mitochondrion. Predicted to act upstream of or within positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway and reactive oxygen species metabolic process. Located in mitochondrion. Orthologous to human ATP5IF1 (ATP synthase inhibitory factor subunit 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5if1

Retroname Coord Strand Genomic Region ENSG
Atpif1P1 chr6:93790330-93790687 + Intergenic
 N/A UCSC
Atpif1P2 chr8:130171758-130172186 - Intergenic
 N/A UCSC
Atpif1P3 chr10:29245894-29246345 + Intergenic
 N/A UCSC
Atpif1P4 chr13:18048266-18048562 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_012915.2
CAACCACGCCCGCAACGCGAGCTGAGCAACGCCGAAGATAATGGCAGGCTCGGCGTTGGCGGTTCGGGCTCGGCTCGGTGTCTGGGGTATGAGGGTCCTGCAAACCCGAGGCTTCGGCTCGGACTCGTCGGAGAGCATGGATTCGGGCGCTGGCTCCATCCGAGAAGCTGGTGGGGCCTTCGGGAAACGAGAGAAGGCTGAAGAGGATCGGTACTTCCGAGAGAAGACTAGAGAGCAGCTGGCTGCCTTGAAGAAGCACCATGAAGATGAGATTGACCACCATTCGAAGGAGATAGAGCGTCTGCAAAAACAGATCGAACGGCATAAGAAGAAGATTAAATACCTAAAGAATAGTGAGCATTGAGTGCACACAGTCAGTCTCTCACAGAGTGGCCAGTATCATTCCCCACTTCTATAGAGATTGTTTTGAATGATTGATGTTTGACCTGTGTGCTACTAACAGATAATAAATTATCACCAGG