Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ppia
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name peptidylprolyl isomerase A
Also known as CYCA|CyP-A
Coordinate chr14:86673775-86677443
Strand +
Gene summary Enables cyclosporin A binding activity. Involved in negative regulation of phosphoprotein phosphatase activity. Predicted to be located in cytosol; extracellular region; and nucleus. Predicted to be part of protein-containing complex. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Used to study epilepsy. Human ortholog(s) of this gene implicated in cholangiocarcinoma and human immunodeficiency virus infectious disease. Orthologous to human PPIA (peptidylprolyl isomerase A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ppia

Retroname Coord Strand Genomic Region ENSG
PpiaP1 chr1:129227404-129228070 - Intergenic
N/A UCSC
PpiaP2 chr1:162888713-162889173 + Intergenic
N/A UCSC
PpiaP3 chr1:205886689-205887383 + Intragenic
N/A UCSC
PpiaP4 chr2:142903198-142903590 - Intergenic
N/A UCSC
PpiaP5 chr2:203702095-203702242 + Intergenic
N/A UCSC
PpiaP6 chr2:22316792-22317021 + Intergenic
N/A UCSC
PpiaP7 chr2:224956013-224956650 - Intergenic
N/A UCSC
PpiaP8 chr2:239559528-239560032 - Intergenic
N/A UCSC
PpiaP9 chr2:243894990-243895438 - Intergenic
N/A UCSC
PpiaP10 chr3:23883484-23883877 - Intergenic
N/A UCSC
PpiaP11 chr3:38864955-38865551 - Intergenic
N/A UCSC
PpiaP12 chr3:9760618-9760857 - Intergenic
N/A UCSC
PpiaP13 chr4:109558634-109558943 - Intergenic
N/A UCSC
PpiaP14 chr4:133086013-133086277 - Intragenic
N/A UCSC
PpiaP15 chr4:40004611-40005349 + Intergenic
N/A UCSC
PpiaP16 chr5:103402781-103403414 + Intergenic
N/A UCSC
PpiaP17 chr5:48233815-48234053 + Intragenic
N/A UCSC
PpiaP18 chr6:12788925-12789144 + Intergenic
N/A UCSC
PpiaP19 chr6:81889937-81890168 - Intergenic
N/A UCSC
PpiaP20 chr6:86504049-86504794 + Intergenic
N/A UCSC
PpiaP21 chr6:89585513-89585701 - Intergenic
N/A UCSC
PpiaP22 chr7:126529427-126529680 + Intergenic
N/A UCSC
PpiaP23 chr7:14665291-14665966 + Intergenic
N/A UCSC
PpiaP24 chr7:29909097-29909797 + Intergenic
N/A UCSC
PpiaP25 chr7:40938488-40939204 - Intergenic
N/A UCSC
PpiaP26 chr8:131547142-131547403 + Intergenic
N/A UCSC
PpiaP27 chr8:65598155-65598668 - Intergenic
N/A UCSC
PpiaP28 chr8:68008230-68008877 + Intergenic
N/A UCSC
PpiaP29 chr8:86116198-86116721 - Intergenic
N/A UCSC
PpiaP30 chr9:20751485-20751879 + Intergenic
N/A UCSC
PpiaP31 chr9:82016667-82017384 - Intergenic
N/A UCSC
PpiaP32 chr12:40981297-40981786 - Intergenic
N/A UCSC
PpiaP33 chr12:7958568-7959024 - Intergenic
N/A UCSC
PpiaP34 chr14:111087171-111087441 + Intergenic
N/A UCSC
PpiaP35 chr14:22706902-22707640 + Intergenic
N/A UCSC
PpiaP36 chr15:40743586-40743731 + Intergenic
N/A UCSC
PpiaP37 chr15:45632537-45633095 - Intergenic
N/A UCSC
PpiaP38 chr15:81576689-81577417 - Intergenic
N/A UCSC
PpiaP39 chr16:32708796-32709521 - Intergenic
N/A UCSC
PpiaP40 chr16:43933349-43933943 + Intergenic
N/A UCSC
PpiaP41 chr17:38072799-38073118 + Intergenic
N/A UCSC
PpiaP42 chr17:4600974-4601516 - Intergenic
N/A UCSC
PpiaP43 chr17:52866449-52867083 + Intergenic
N/A UCSC
PpiaP44 chr18:12323538-12323694 - Intergenic
N/A UCSC
PpiaP45 chr18:7607656-7608253 - Intergenic
N/A UCSC
PpiaP46 chrX:10764796-10765413 + Intergenic
N/A UCSC
PpiaP47 chrX:109525545-109526193 + Intragenic
N/A UCSC
PpiaP48 chrX:12743598-12744276 + Intergenic
N/A UCSC
PpiaP49 chrX:15663278-15663966 - Intergenic
N/A UCSC
PpiaP50 chrX:52143423-52143754 - Intragenic
N/A UCSC
PpiaP51 chrX:8211931-8212657 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_017101.1
CTTTGCAGACGCCGCTGTCTCTTTTCGCCGCTTGCTGCAGACATGGTCAACCCCACCGTGTTCTTCGACATCACGGCTGATGGCGAGCCCTTGGGTCGCGTCTGCTTCGAGCTGTTTGCAGACAAAGTTCCAAAGACAGCAGAAAACTTTCGTGCTCTGAGCACTGGGGAGAAAGGATTTGGCTATAAGGGTTCCTCCTTTCACAGAATTATTCCAGGATTCATGTGCCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTACGGAGAGAAATTTGAGGATGAGAACTTCATCCTGAAGCATACAGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCAAACACAAATGGTTCCCAGTTTTTTATCTGCACTGCCAAGACTGAGTGGCTGGATGGCAAGCATGTGGTCTTTGGGAAGGTGAAAGAAGGCATGAGCATTGTGGAAGCCATGGAGCGTTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATCTCCGACTGTGGACAACTCTAATTTCTTTGACTTGCGGGCATTTTACCCATCAAACCATTCCTTCTGTAGCTCAGGAGAGCACCCCCACCCCATCTGCTCGCAATACCCTGTAATCTCTGCTCTCACTGAAGTTCTTTGGGTTCCATATTTTCCTCATTCCCCTTCAAGTCTAGCAGGATTGCAAAGTTAAGTTTATGATTATGAATAAAAACTAAATGAGAAGTGTT