Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Selenow
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name selenoprotein W
Also known as SelW|Sepw1
Coordinate chr1:77530692-77535765
Strand -
Gene summary This gene encodes a selenoprotein containing a selenocysteine (Sec) residue, which is encoded by the UGA codon that normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, the Sec insertion sequence (SECIS) element that is necessary for the recognition of UGA as a Sec codon rather than as a stop signal. This protein is highly expressed in skeletal muscle and brain. It belongs to the SelWTH family, which possesses a thioredoxin-like fold and a conserved CxxU (C is cysteine, U is Sec) motif, suggesting a redox function for this gene. Studies in mouse show that this selenoprotein is involved in muscle growth and differentiation, and in the protection of neurons from oxidative stress during neuronal development. A pseudogene of this locus has been identified on chromosome 10. [provided by RefSeq, Aug 2017]

Retrocopy(s) from Selenow

Retroname Coord Strand Genomic Region ENSG
Sepw1P1 chr10:48498080-48498687 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_013027.3
GCGCACGGCCCCACGCGCAGAGATTGAAGTCCTTGCTGCTAGTGGGTCGGGTCCTCGCTTTGTGCGGGGATGCGACGTGCAGCAATGGCGCTAGCCGTTCGAGTCGTGTATTGTGGAGCTTGAGGCTATAAGCCCAAGTATCTCCAGCTCAAGGAGAAGCTAGAACATGAGTTCCCCGGATGCCTGGACATCTGTGGCGAGGGGACTCCCCAGGTCACCGGGTTCTTTGAAGTGACGGTAGCCGGGAAGTTGGTTCACTCCAAGAAGAGAGGTGATGGCTACGTGGATACAGAGAGCAAGTTCCGGAAACTGGTGACTGCCATCAAAGCCGCCTTGGCTCAGTGCCAGTGAGCCCTAGAGGCAGGGTCCTGAAGGCTCCTGGCCGGCCTTTCTTGGCAGCCGCTTCATGACAGGAAGGACTGAAATGTCTCAAAGACCTGTGGTCTTTCTTCGATGTTCCTGCGGCCACCAAGTCAGGCCAGAGATGGATTCTGTGTGTGGGTGCCTTCCCAGAATCTACCTGTGCACGCACCCCGCCCTGCCCTCCCGCCCTCTTCCTCACCTCTCTCTGAATTCCCCCATGTTTCCTACCTTCCCTCCTGCTTTGGTTTCCCGTCTCCCCCTCAAGACTGCAAGAAGACGGGCAGCCGTGTCGCCAGGTGttcctggttgaataaaggttggccaaggcaacctgag