RCPedia: Genes

Summary

Gene Name	Ppp1cb	Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie	Rattus norvegicus
Full Name	protein phosphatase 1 catalytic subunit beta
Also known as	PP1B\|PP1beta
Coordinate	chr6:23548507-23581136
Strand	-
Gene summary	Enables phosphoprotein phosphatase activity. Involved in protein dephosphorylation; regulation of glycogen biosynthetic process; and regulation of glycogen catabolic process. Located in glycogen granule. Part of protein phosphatase type 1 complex. Human ortholog(s) of this gene implicated in Noonan syndrome-like disorder with loose anagen hair 2. Orthologous to human PPP1CB (protein phosphatase 1 catalytic subunit beta). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ppp1cb

Retroname	Coord	Strand	Genomic Region	ENSG
Ppp1cbP1	chr1:71922776-71924561	-	Intergenic	N/A	UCSC
Ppp1cbP2	chr6:18087406-18090247	-	Intergenic	N/A	UCSC
Ppp1cbP3	chr19:27690628-27692740	-	Intergenic	N/A	UCSC
Ppp1cbP4	chr19:29369752-29371992	-	Intergenic	N/A	UCSC

Expression

Transcript Sequences

>NM_013065.2
ggctggggtCTGACGCGGCCCGGTTCGTGGGGGCCCGCTTGTTTATTTATTTATTTCTAGTGGGTGCCGCCGGCGTGTGCGCGCGCTCTCGCTGCTCGGCGGGGAGGGGGTGGGGGGAGGGCCGGCGCCCGGGGGGAGTTGGAGCCGGGGTCGAAACGCCGCGTGACTCGTAGGTGAGAACGCCGAGCTAccaccgccgccgccgctgccgccgcGGAGAAGCCCTTGTTCCCGCTGCGGGGAGGAGAGTCTGGTGCCTACAAGATGGCGGACGGGGAGCTGAACGTGGACAGCCTCATCACCCGCCTGCTGGAGGTACGAGGATGTCGTCCGGGAAAAATTGTGCAGATGACTGAAGCAGAAGTCCGAGGACTGTGTATCAAGTCTCGTGAAATCTTTCTTAGCCAGCCTATTCTTTTGGAATTGGAAGCGCCACTGAAGATTTGTGGAGATATTCATGGACAGTATACAGACTTACTGAGATTATTTGAATATGGAGGTTTTCCACCAGAAGCCAACTATCTTTTCTTAGGAGATTATGTGGACAGAGGAAAGCAGTCTTTGGAAACCATCTGTTTGCTATTGGCTTACAAAATCAAATACCCAGAGAACTTCTTTCTTCTACGAGGAAACCATGAGTGTGCTAGCATCAACCGCATTTATGGATTCTATGATGAGTGCAAACGAAGATTTAATATTAAATTGTGGAAGACATTCACTGATTGTTTTAATTGTCTGCCTATAGCTGCTATTGTTGATGAGAAAATCTTCTGCTGTCATGGAGGACTGTCACCAGACCTACAGTCTATGGAACAGATTCGGAGAATTATGAGACCCACTGACGTACCTGATACAGGTTTGCTTTGTGATTTACTGTGGTCCGACCCAGATAAGGATGTACAAGGCTGGGGAGAAAATGATCGTGGTGTTTCTTTTACTTTTGGAGCTGATGTAGTCAGTAAATTTCTGAATCGTCATGATTTGGACTTGATTTGTCGAGCCCATCAGGTGGTAGAAGATGGATATGAATTTTTTGCTAAACGACAATTGGTAACTTTATTTTCTGCCCCAAATTACTGCGGCGAGTTTGACAATGCTGGTGGTATGATGAGTGTGGATGAAACTTTGATGTGTTCATTCCAGATATTGAAACCATCTGAAAAGAAAGCTAAGTACCAGTATGGTGGGCTGAATTCTGGACGTCCTGTCACTCCGCCTCGAACAGCTAATCCACCGAAGAAAAGGTGAAGACAGGAATTCCGGAAAGAGAAACCATCAGATTTGTTAAGGACATACTTCATAATATATAAGTGTGCACTGTAAAACCATCCAGCCATTCGACACCCTTTATGATGTCACACCTTTAACTTAAGGAGACGGGTAAAGGATCTTAAATTTTTTTCTAATAGAAAGATGTGCTACACTGTATTGTAATAAGTATACTCTGTTATAATATTCAACAAAGTTAAATCCAAATTCAAAAGTATCCATTAAAGTTCTATCTTCTCATATCACAGTTTTTAAAGTTGAAAGCATCCCAGTTAAACTAGCTGCGTTAGTTACCCAGATGAGAGCATGAAGATCCATCTGTGTAATGTGGCtttagtgttgcttggttgtttctttattttgggcttgttttgttttgtttgttttTGCTAGAATAATGGCATCTACTTTTCCTATTTTTCCCTAACCATTTTAAAAAGTGAAAATGGGAAGAGCTTTAAAGACATTCACCAACTATTCTTTTCCTTCACTTATCTACTTAAGGAACTGTTGGATCTTACTAAGAAAACTTACGCCTCATAATAAAAAGGAACTTTAGAGGCCGATAGGTTTTAAAAATATACAAACTATTTGATCCAATGATTTTAATCAAACAGTTTGACTGGGCAAACTTTGCAGCTGATAATGACTATTTCGCTTTTTACAAATTGCCACTGATTTGGATTTGTGCACTCTAACCTTTAATTTATTGATGCTCTATTGTGCAGTAGCATTTCATTTAAGATAAGGCTCATATAGTACTATCCAAAACTAGTTGGTAATGTGATTATGTGGTACCTTGGCTTTAGGTTTTAATTCGCACGAAACACCTTTTGGCATGCTTAACTTTCTGGTATTATCCTCACCTGCATTGGTtttgttttttggggtttttgttgttgtttgtttgtttgtttTTAGATCCACAGAACATGAGAATCCTTTTTGACAAGCCTTGGAAAGCTGGCTCTTCTTTCCCTCTCTATGTGAAGGATGTATTTAAATGAACACTGGTCAGTGGGACATTGTCAGCTCTGAGTATTGGGTGCTTCACTGTCTAATAATTGCCATGTGAATGTTGTTTTTGACTGTAAGGCTATGTCACTAAAGATTTTTACTCTGCGTTTTCATAATCAAAGGTCATGATGTGTATAGACATGCTTTGTAGTGAAGTATAGTAGCAATAATTTCTGCACATGATCAAGAGTTTATTGCAGCATTTCTTTCCCTGTTCTCTCTTTTTTAAGGGTTAGCATTAACAAATGTCAAGGAATAGCAAAGTCAACAAAGACTTTAGGAGGTGGAATTAAGAACACACAGATTTGTGATTCTTTGGATGTGACACTTATTGGATGTTATTCTAAAGTCTTATTGAACATTGTCAAATTTGTAAGCTTCATGGGGATGGACATAATGTTTATATAATGCCCTTCTTATGTGTTACCATAGATGTGAAACCTTATATTGTCTTTGAAAATGTTAAATTGAGAACTCTGTTAACATTTTATGGATTGGCACATTATATTACTGCAAGAAACATTTGATTTTCAGCACAGTGCAAAAGTTCTTTAAAATGCATATGTCTTTTTTTCTAATTCAATTTTGTTTAAAGCACATTTTAAATGTAGTTTTCTCATTTAGTAAAAGTTGTCTAATTGA