Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Nr5a2
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name nuclear receptor subfamily 5, group A, member 2
Also known as D1Ertd308e|Ftf|LRH-1|UF2-H3B
Coordinate chr1:136770300-136888186
Strand -
Gene summary Enables DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Involved in positive regulation of transcription by RNA polymerase II. Acts upstream of or within several processes, including cellular response to leukemia inhibitory factor; cholesterol homeostasis; and pancreas morphogenesis. Located in nucleus. Part of RNA polymerase II transcription regulator complex. Is expressed in several structures, including alimentary system; central nervous system; ear; early conceptus; and gonad. Orthologous to human NR5A2 (nuclear receptor subfamily 5 group A member 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nr5a2

Retroname Coord Strand Genomic Region ENSG
Nr5a2P1 chr3:144484787-144487128 + Intragenic
ENSMUSG00000104841 UCSC
Nr5a2P2 chr6:118593196-118596307 - Intragenic
ENSMUSG00000100867 UCSC

Expression

Transcript Sequences

>NM_001159769.2
AATTCGTTTCTCTTTTCCCTTGGGCTGTCACTTCCCTTCAGGGGAAGAATACTTTAAAACAGAGATCTAGGACTCTTCCCGGGCTTCAGAACGTAGTATCATCAGTTCAATACAACTAGATACCTAGGACCGGAAAGCGTCTGCACCAGGGTCAGAGACTCGCCACTCCCCCAAACGTGAGGAACAACTCCGGGAAAAACGTGCTGGGCTTCCGGACCGACACCGACGCCCCATTCCCGCCCGCAGCCGCCTTGTCATGCTGCCCAAAGTGGAGACGGAAGCCCCAGGACTGGTCCGATCGCATGGGGAACAGGGGCAGATGCCAGAAAACATGCAAGtgtcTCAATTTAAAATGGTGAATTACTCCTATGATGAAGATCTGGAAGAGCTATGTCCTGTGTGTGGCGATAAAGTGTCTGGGTACCATTACGGTCTCCTCACGTGCGAAAGCTGCAAGGGTTTTTTTAAGCGAACTGTCCAAAACCAAAAAAGGTACACGTGCATAGAGAACCAGAATTGCCAAATTGACAAAACGCAGAGAAAACGATGTCCCTACTGTCGATTCAAAAAATGTATCGATGTTGGGATGAAGCTGGAAGCCGTAAGAGCCGACCGCATGCGAGGGGGCAGAAATAAGTTTGGGCCAATGTACAAGAGAGACAGGGCTTTGAAGCAGCAGAAGAAAGCCCTCATTCGAGCCAATGGACTTAAGCTGGAAGCCATGTCTCAGGTGATCCAAGCAATGCCCTCAGACCTGACCTCTGCAATTCAGAACATTCATTCCGCCTCCAAAGGCCTACCTCTGAGCCATGTAGCCTTGCCTCCGACAGACTATGACAGAAGTCCCTTTGTCACATCTCCCATTAGCATGACAATGCCACCTCACAGCAGCCTGCATGGTTACCAACCCTATGGTCACTTTCCTAGTCGGGCCATCAAGTCTGAGTACCCAGACCCCTACTCCAGCTCACCTGAGTCAATGATGGGTTACTCCTACATGGATGGTTACCAGACAAACTCCCCGGCCAGCATCCCACACCTGATACTGGAACTTTTGAAGTGTGAACCAGATGAGCCTCAAGTTCAAGCGAAGATCATGGCTTACCTCCAGCAAGAGCAGAGTAACCGAAACAGGCAAGAAAAGCTGAGCGCATTTGGGCTTTTATGCAAAATGGCGGACCAGACCCTGTTCTCCATTGTTGAGTGGGCCAGGAGTAGTATCTTCTTCAGGGAACTGAAGGTTGATGACCAAATGAAGCTGCTTCAAAACTGCTGGAGTGAGCTCTTGATTCTCGATCACATTTACCGACAAGTGGCGCATGGGAAGGAAGGGACAATCTTCCTGGTTACTGGAGAACACGTGGACTACTCCACCATCATCTCACACACAGAAGTCGCGTTCAACAACCTCCTGAGTCTCGCACAGGAGCTGGTGGTGAGGCTCCGTTCCCTTCAGTTCGATCAGCGGGAGTTTGTATGTCTCAAGTTCCTGGTGCTGTTCAGCTCAGATGTGAAGAACCTGGAGAACCTGCAGCTGGTGGAAGGTGTCCAAGAGCAGGTGAATGCCGCCCTGCTGGACTACACGGTTTGCAACTACCCACAACAGACTGAGAAATTCGGACAGCTACTTCTTCGGCTACCCGAGATCCGGGCAATCAGCAAGCAGGCAGAAGACTACCTGTACTATAAGCACGTGAACGGGGATGTGCCCTATAATAACCTCCTCATTGAGATGCTGCATGCCAAAAGAGCCTAAGTCCCCACCCCTGGAAGCTTGCTCTAGGAACACAgactggaaggagaagaggaggacgaTGACAGAAACACAATACTCTGAACTGCTCCAAGCAATGCTAATTATAAACTTGGTTTAAagacactgaattttaaaagcataataATTAAATACCTAATAGCAAATAAATGATATATCAGGGTATTTGTACTGCAAACTGTGAATCAAAGGCTGTATGAATCAAAGGATTCATATGAAAGACATTGTAATGGGGTGGATTGAACTTACAGATGGAGACCAATACCACAGCAGAATAAAAATGGACAGAACAATCCTTGTATATTTAAACTAATCTGCTATTAAGAAATTCAGAAGTTGATCTCTGTTATTAATTGGATTTGTCCTGAATTACTCCGTGGTGACGCTGAACAACTCAAGAATACATGGGCTGTGCCTTGGcagcccctccccatccctcccaccaccaccacccccacccccacaaggcCCTATACCTTCTGACCTGTGAGCCCTGAAGCTATTTTAAGGACTTCTGTTCAGCCATACCCAGTAGTAGCTCCACTAAACCATGATTTCTGGATGTCTGTGTCTTAGACCTGCCAACAGCTAATAAGAACAATGTATAAATATGTCAGCTTGCATTTTAAATATGTGCTGAAGTTTGTTTTGTCGTGTGTtcgtaattaaaaagaaaacggGCAGTAACCCTCTTCTATATAAGCATTAGTTAATATTAAGGGAAATCAAACAAATCTAAGCCAATACTCCCAACAAGCAAGTTAGATCTTacttctgctgctgttgctgaaATGTGGCTTTGGCATGGTTGGGTTTCATAAAACTTTTTGGCCAAGAGGCTTGTTAGTATACATCCATCTGTTTAGTCATCAAGGTTTGtagttcacttaaaaaaaaataaaccactaGACATCTTTTGCTGAATGTCAAATAGTCACAGTCTAAGTAGCCAAAAAGTCAAAGCGTGTTAAACATTGCCAAATGAAGGAAAGGGTGAGCTGCAAAGGGGATGGTTCGAGGTTCATTCCAGTTGTGACCCGAGCGTCCCCAAAACCTGGGATGCAAAGACAGTGATTCTGCATATGGCCTGGAAAGACAGGAAAGCCAGTCTCCTACAAAGGGGAATGGAAGATCCTGGCCTCTAAGTCATAGACCAAAGTCTGctgtagaacaaaaaaaaaaatactggaggGCAGAGATAGCAAACCAAGTCTCCAAACAATGCTGTCAGTATTAGCATGCGGTGCCGTGGGCATGGAAACCTTGCCTTACTTCCTGGTCCTAAAAGGGAGCTGTGCAGATGTGGatcaacatttgttgaaaataaagtattaatactttaaaagtcaaataaaatatagtgtttaCATTCTTTAGgtcctgggaggagttgggggggggggactctgaTAATACAGATAGTAAAAGCAGTAATttctttaatgttatttttctggTTAGTAATTATTTTTAACAGTACTTAATTACTGTATGTCGTGAGACACTAAAATCAAAAATGGGACTCtcattttgtctttatttgttaAGATTACCAGCAGCACAATCATTTGTAGAAACTGTATAAAAAAAATCTCCTGGTCCCTTAATTTTTTTCCACAAATGTTTCTGGCTTTGGAATAgtttatttatattgtatatCATAGTTTCAACTATAGACAATTACAATGCTAATTTATTGTTCCTTGGGTTCCCCTTTGTATAAAATAGAGCCAAGACTGAAGAAACCAAATATATGTGTTTACTATAGCATGTCTTCAAGTTAGTGAAACATAGTTCAGGGGTATAGAAGGGTCTTAATGATTAAAACCATCCACTTGATTACATGTCTCAAAACTCCCAC