Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Psma5
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name proteasome subunit alpha 5
Also known as ZETA
Coordinate chr3:108164242-108187268
Strand +
Gene summary Predicted to be involved in proteasomal protein catabolic process. Part of proteasome core complex. Orthologous to human PSMA5 (proteasome 20S subunit alpha 5). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Psma5

Retroname Coord Strand Genomic Region ENSG
Psma5P2 chr10:85149342-85150302 + Intergenic
ENSMUSG00000050490 UCSC
Psma5P3 chr19:35029257-35030140 - Intergenic
ENSMUSG00000101966 UCSC
Psma5P1 chr4:135443038-135444009 - Intergenic
ENSMUSG00000083678 UCSC

Expression

Transcript Sequences

>NM_011967.3
AAAGCGCGGCGTGCTCACTCCTCGACGACGAGGTTCACTCTCACCGGTTGCCTCGAGTCCCAGCGCCCGTAGCAACCAAGGGTGACGGAAAGCGGAAGTGCTCTCTAGTTCCGCCTCCCTGTTAACCCAGGTCCGGTGAAGAAGCTTGTCAAGTCCAATCATCGCGGCGAGAATATCAATCAGCCAATAAAAGGGAAGCACGGGAGGGCGGGCTAAAAAGGTCGCGTGCGCACGCGCAGACGGCTGCAGGGTCCTTGGTGCTGTGGCGGTGTGGTTGATTAGGGTGCTGCTTTCAATCGTGTGGCCTTTGGGAACCCCGCGTAGCCACTGCCGCCTCCTTCTGTCCTCGCCATGTTCCTCACTCGGTCCGAGTACGACAGGGGTGTGAATACTTTTTCTCCTGAAGGAAGATTATTTCAAGTGGAATATGCCATTGAGGCTATCAAGctTGGTTCTACAGCCATTGGCATCCAGACCTCAGAGGGTGTATGTCTAGCTGTGGAGAAGAGAATTACCTCCCCACTAATGGAGCCTAGCAGCATTGAGAAGATTGTAGAGATCGATGCTCATATAGGTTGTGCCATGAGTGGGCTAATTGCTGATGCTAAAACTTTAATTGATAAAGCCAGAGTGGAGACACAGAACCACTGGTTCACCTATAATGAGACAATGACAGTTGAGAGTGTGACCCAGGCTGTGTCCAATCTGGCTCTGCAGTTTGGAGAAGAAGATGCAGATCCAGGTGCTATGTCTCGTCCCTTTGGAGTAGCATTGTTGTTTGGAGGAGTTGATGAGAAAGGACCCCAACTGTTTCACATGGACCCATCTGGGACCTTTGTACAGTGTGATGCTCGAGCAATTGGCTCTGCTTCTGAGGGTGCCCAGAGCTCCTTGCAAGAAGTTTACCATAAGtctATGACTCTGAAGGAGGCCATCAAGTCCTCGCTCATCATCCTCAAGCAAGTCATGGAGGAGAAGCTGAATGCAACCAACATCGAGcTAGCCACGGTGCAGCCTGGTCAGAATTTCCACATGTTCACAAAGGAAGAACTGGAGGAGGTGATCAAGGACATTTAAGAAGGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACTTTATTTCCAGCTCTTATGTCATGGAAAATAtccagtatatgtgtgtgtgtttttttatgaAGTCTGTACATAACAGcaattct