Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Psma6
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name proteasome subunit alpha 6
Also known as IOTA
Coordinate chr12:55431007-55465244
Strand +
Gene summary Enables RNA binding activity. Predicted to be involved in positive regulation of NF-kappaB transcription factor activity and proteasomal protein catabolic process. Located in P-body and nuclear matrix. Part of proteasome core complex. Is expressed in central nervous system and retina. Human ortholog(s) of this gene implicated in myocardial infarction. Orthologous to human PSMA6 (proteasome 20S subunit alpha 6). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Psma6

Retroname Coord Strand Genomic Region ENSG
Psma6P1 chr10:48970029-48970321 - Intragenic
ENSMUSG00000111374 UCSC
Psma6P2 chr10:71634788-71635668 - Intergenic
ENSMUSG00000111999 UCSC

Expression

Transcript Sequences

>NM_011968.3
GGAAGCAGTAGCCATAACTTCCGGGAGGGGGCTTGGGTCCCTGGTGTGTGTGCTACGGGGTGCAGACTGTGTTTAAAATAGCAGGAACGCCATGTCCCGGGGTTCCAGCGCCGGTTTTGACCGTCACATTACTATCTTCTCTCCCGAGGGCCGACTCTACCAAGTAGaataTGCTTTTAAGGCTATTAACCAGGGTGGACTTACATCTGTTGCTGTCAGAGGAAAGGACTgtgcagttattgtcacacagaaGAAAGTACCCgACAAACTACTGGATTCCAGCACAGTGACTCACTTGTTCAAGATAACGGAAAGCATTGGCTGTGTGATGACAGGAATGACAGCTGACAGCAGATCCCAGGTACAGAGGGCACGCTATGAGGCAGCTAATTGGAAATACAAGTATGGCTATGAAATTCCTGTGGACATGCTGTGCAAAAGAATTGCTGATATTTCTCAAGTCTACACACAGAACGCTGAAATGAGGCCACTCGGTTGTTGTATGATTTTAATCGGTATCGATGAAGAGCAAGGCCCTCAAGTGTACAAGTGTGATCCTGCAGGTTACTACTGTGGCTTTAAAGCCACGGCGGCAGGAGTTAAACAAACAGAGTCAACCAGCTTCCttgaaaagaaagtgaagaagaaatTTGATTGGACATTTGAACAGACAGTGGAAACTGCAATTACATGCCTGTCTACTGTTCTGTCGATTGACTTCAAACCTTCAGAAATAGAAGTTGGAGTAGTTACAGTTGAAAATCCTAAATTCAGGATTCTTACTGAAGCAGAGATTGACGCTCACCTTGTTGCTCTAGCAGAGAGAGACTGAACACTCTTATCAGCTTACCAGATCCTTGATGCCTGTGCCTATGTGTTTGGTAACAACAAACTGACATCATAGAGGCCCTGGATTGAAGATGGAGACTCTCCCACTCCTCCTGCCACTGACTGGTTAGGACTCTGTATAAATAAAACAGTGCTTTTGGAAATGGCG